Rahnella bonaserana: QNM34_12870
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Entry
QNM34_12870 CDS
T09076
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
rbon
Rahnella bonaserana
Pathway
rbon00521
Streptomycin biosynthesis
rbon00523
Polyketide sugar unit biosynthesis
rbon00525
Acarbose and validamycin biosynthesis
rbon00541
O-Antigen nucleotide sugar biosynthesis
rbon01100
Metabolic pathways
rbon01110
Biosynthesis of secondary metabolites
rbon01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
rbon00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
QNM34_12870 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
QNM34_12870 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
QNM34_12870 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
QNM34_12870 (rfbB)
00525 Acarbose and validamycin biosynthesis
QNM34_12870 (rfbB)
Enzymes [BR:
rbon01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
QNM34_12870 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
adh_short
NAD_binding_10
KR
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
WHZ42906
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Position
complement(2854765..2855832)
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AA seq
355 aa
AA seq
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MMNILITGGAGFIGSAVVRHIISETNDNVLVVDSLTYAGNLESLKEVENDPRYRFVLANI
CDRDSLDEIFSEFKPDAVMHLAAESHVDRSIDGPSAFIDTNITGTYTLLESARHYWSGLD
DEKKNVFRFHHISTDEVYGDLHGTTDLFTETTPYAPSSPYSASKAASDHLVRAWNRTYGL
PTLITNCSNNYGPYHFPEKLIPLVILNAIAGKPLPVYGDGAQIRDWLFVEDHARALYEVV
TKGVIGETYNIGGHNERKNIDVVKTICSILDQLVSDKPAGLTHFNELITFVKDRPGHDMR
YAIDASKIERELGWTPVETFESGILKTVKWYLENETWWKRVQDGSYAGERLGLKD
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
ataatgaacatactgataacgggcggtgcgggtttcatcggttctgcggtagtgcgtcac
atcatctctgaaacaaacgacaatgtgcttgtggttgatagtttgacgtacgcaggtaat
ttagaatccctgaaagaagtcgaaaatgatcctcgctaccgttttgtcctggcgaacatt
tgtgaccgtgattctctggatgagatattttcagagtttaaaccggatgcagtgatgcac
cttgcggcagaaagccatgtagacaggtcaattgatggaccttcggcctttattgatact
aatatcaccggcacatacactcttttagaatctgcacgacattattggtccggtctggat
gatgagaaaaagaatgtattccgtttccatcatatttcaactgatgaagtctacggtgat
ctgcatggaaccaccgacctattcaccgagactacgccatatgctccgagtagcccgtac
tctgcttccaaagcggcaagcgatcacctcgtacgcgcatggaaccgaacgtatggattg
ccaactttaataacaaattgctcaaataactacggtccttaccactttcctgagaagttg
atcccccttgttatccttaatgctatagccggtaaacctcttcctgtttatggtgatggt
gcccagatccgggactggttatttgtagaagatcacgccagagccctttatgaggttgtt
acgaaaggtgttattggcgagacgtataatattggcgggcataatgagcgtaaaaatatt
gatgttgtgaagacaatttgctcaattttggatcaattagtgtctgacaaaccagcggga
cttacgcattttaatgaattgatcaccttcgttaaagatcgccctggtcatgatatgcgt
tatgccatcgacgcgagcaaaattgaacgtgaacttggatggacacctgttgagactttt
gaaagcggaattttgaaaacagtaaaatggtatcttgaaaatgaaacctggtggaaacgt
gttcaggatgggtcttatgcaggtgagcgtttaggtttgaaagactaa
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