Rahnella bonaserana: QNM34_18620
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Entry
QNM34_18620 CDS
T09076
Symbol
mrcB
Name
(GenBank) bifunctional glycosyl transferase/transpeptidase
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
rbon
Rahnella bonaserana
Pathway
rbon00550
Peptidoglycan biosynthesis
rbon01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rbon00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
QNM34_18620 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rbon01003
]
QNM34_18620 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rbon01011
]
QNM34_18620 (mrcB)
Enzymes [BR:
rbon01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
QNM34_18620 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
QNM34_18620 (mrcB)
Glycosyltransferases [BR:
rbon01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
QNM34_18620 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
rbon01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
QNM34_18620 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PBP1_TM
UB2H
UvrB_inter
Mito_carr
FtsA_C
Motif
Other DBs
NCBI-ProteinID:
WHZ40011
LinkDB
All DBs
Position
complement(4046794..4049424)
Genome browser
AA seq
876 aa
AA seq
DB search
MSGDDREPIGRKGKPAGRKPARARPVRRSRRDDDYDDYEEEIDDEYEDDDEYEEEQGSRM
SRKAAPRKAKKGGKKSLKRRIFWLLVKLFVVFLILLGIYAFYLNKQIHDRIDGGKVWQLP
AAVYGRQVNLEPDMQISKAEMVGLLEGTQYREVTRITRPGEFTVHANYIDLLRRPFDFPE
GKEGQVNARLMFDGSSLAEIKNLDNQRDFGLFRLDPRLITMLQASNANGEQRLFVPRSGF
PDLLVDTLLATEDRHFYEHDGINFYSIGRAVLANLTAGHAVQGGSTLTQQLVKNLFLTNE
RSLSRKAREAIMAILLDADYSKDRILELYLNEVYLGQSGSDQIRGFPLASLYYFGRPVNE
LSLDQQALLVGMVKGASLYNPWRNPQMALQRRNLVLRLLVDQKVIDQELYDMLSARPLGV
QPKGGVISPQPAFMQMVRQELQAKLGDKVQDMSGVKIFTTLDPISQDAAEKAVEEGIPLL
RKKSGLNDIETAMVIVDRYTGEVRAMVGGAETQFAGFNRAMQARRQVGSLAKPATYLTAL
SQPDKYRLNTILADQPLTLKLANGQTWSPKNDDHQFRGQVLLVDALARSMNVPTVNLGMA
VGLDNITQTLINLGIPKESLNQTPSMLLGAIALTPMEVAQEYQTIASGGNKAPLSAVRSV
IAEDGTVLYQSFPQAVRVIPSQAAYLTLYAMQQVVQEGTSRALANKFPKLHLAAKTGTSN
ELRDSWFAGIDGNQVAITWVGRDNNGPSKLWGSTGALVLYGRYLENGTPQPLDLQMPEGI
STMNIDGSGNFVCGNSSGGMLGGGGATRSIPVWTDSPDAMCQASVTAVQQQQQQMQQQQQ
QQQQQSGQQQQPQSQDEKKDSNGVAGWIKDMFGSGN
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcgatgatcgcgagccgattggccgtaaaggtaaacctgccgggcggaagcct
gcgcgggctcgtcccgttcgccgtagccgcagggatgacgactacgatgattacgaagaa
gaaatcgatgacgagtatgaggatgacgatgagtacgaagaagaacagggatcccgcatg
agccgtaaagcagcgccgcgtaaagccaaaaaaggcggaaaaaagagcctgaagcgccgt
attttctggctgttagtcaaactgttcgtcgtttttcttattctgctcgggatttatgcg
ttttatctcaacaaacaaatccatgaccgcattgatggcggtaaagtctggcaattgcct
gcggcggtgtatggtcgccaggtgaaccttgagccggacatgcagatcagcaaagctgag
atggtcggattgctggaaggtacgcagtatcgcgaagtgacgcgtatcacccgcccgggc
gaatttacggtccacgcaaattacatcgatttgctgcgtcgtccgtttgatttcccggaa
ggtaaagaagggcaggtaaacgcccgtctgatgtttgatggcagcagccttgcagaaatt
aaaaatctggataatcagcgtgatttcgggctgttccgcctcgacccgcgtctgataacg
atgttgcaggcgtcgaatgctaacggcgaacagcgtctgttcgtgccgcgctccggtttc
ccggatctgctggtcgataccctgctggcaacggaagaccgtcatttctatgaacacgac
ggcatcaacttctattccatcggccgtgcggtgctggcgaacctgaccgccggtcatgcg
gtgcagggcggttcaacgctgacgcagcagctggtgaaaaacctgttcctgaccaacgaa
cgttcactgagccgaaaagcgcgtgaagccattatggccatcctgctggacgcggattac
agcaaagaccgcattcttgagctgtatctgaacgaagtgtatctcggccagagcggttcc
gatcagatccgcggtttcccgctggcgagcctgtattactttggtcgcccggtgaatgaa
ctgagtctggatcagcaggcattgctggtcggcatggtgaaaggtgcgtcgctgtataac
ccttggcgtaacccgcaaatggccttgcagcgtcgtaatctggtgctgcgtttactggtt
gatcagaaagttatcgatcaggaactgtatgacatgctcagcgcccgtccgctcggcgtg
cagccgaaaggcggcgtaatttcgcctcagcctgcttttatgcagatggtgcgtcaggag
ttgcaggccaaactgggcgataaagttcaggatatgtcaggggtgaaaatcttcaccacg
ctggatcctatttctcaggatgcggcggaaaaagcggtcgaagaaggcattcctttactg
cgtaagaaaagtggcctgaatgacatcgaaaccgcgatggtcattgttgaccgttatacc
ggtgaagtgcgggcgatggtcggcggcgcggaaacgcagtttgcaggctttaaccgtgcg
atgcaggcgcgtcgtcaggtgggttctctggctaaaccggcgacctatctgactgcactt
tcacagccggataaataccgtctgaacaccattctggctgaccagccgctgacgctgaaa
ctggcaaatggtcagacgtggtcaccgaaaaacgatgaccatcagttccgtggtcaggtt
ctgctggtggatgcgctggcgcgttccatgaacgtcccgacggtgaatctgggtatggcg
gtagggctggataacatcacccaaacgctgatcaatctggggatcccgaaagagtccctg
aaccagacgccgtcgatgctgcttggtgcgattgcactgacgccgatggaagttgcgcag
gaatatcagaccattgccagcggcggtaacaaagcgccactgtccgcggtgcgttcggtg
attgcggaagacggcacggtgctttatcagagcttcccgcaggcggtccgcgtgatccca
tcgcaggcggcgtatctgacgctgtatgcgatgcagcaggttgtacaggaagggacctcg
cgcgcgctggcgaacaaattcccgaaactgcatctggcagcgaaaaccggtacgtcgaac
gaactgcgtgacagctggtttgcgggcatcgacggcaatcaggtggcgattacctgggtt
ggccgcgataacaacggcccgtccaaactgtggggttcaaccggtgcgctggtgctttac
ggccgctatctggagaacggcacgccgcagcctctggatctgcaaatgccagaaggcatc
agtacgatgaacattgatggcagcggcaactttgtctgcggcaacagcagcggtggaatg
ctgggcggcggtggcgcaacgcgttccattccggtctggactgattctccggacgccatg
tgccaggcttctgtgaccgctgttcagcaacagcagcaacagatgcagcaacagcagcag
caacaacaacagcaatccgggcaacaacaacagccacaatctcaggatgagaagaaagac
agcaacggcgttgcgggctggattaaggatatgtttggctcaggcaactaa
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