Rhizobium binae: J2J99_04005
Help
Entry
J2J99_04005 CDS
T07180
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
rbq
Rhizobium binae
Pathway
rbq00521
Streptomycin biosynthesis
rbq00523
Polyketide sugar unit biosynthesis
rbq00541
O-Antigen nucleotide sugar biosynthesis
rbq01100
Metabolic pathways
rbq01110
Biosynthesis of secondary metabolites
rbq01250
Biosynthesis of nucleotide sugars
Module
rbq_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
rbq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
J2J99_04005 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
J2J99_04005 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
J2J99_04005 (rfbC)
Enzymes [BR:
rbq01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
J2J99_04005 (rfbC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QSY82993
LinkDB
All DBs
Position
complement(829296..829862)
Genome browser
AA seq
188 aa
AA seq
DB search
MYALNLDQLEIEDVKKITPARFGDSRGYFSEIFKDSWFRSNVADVSFVQDNESLSAEPGT
VRGLHFQLHPFAQGKLVRCLRGALLDVAVDIRQGSATYGKWVSAELSPENGAQLWVPGGF
AHGFITLQPDTIISYKVTAPYSAEHDRGVRWDDPAIGIRWPRMDAYILSDKDGKQPLLSE
LPPYFQFS
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcgttgaatttagatcaactcgagattgaggacgtaaagaagatcacgcctgcg
agattcggcgattcgagaggctatttcagcgagatcttcaaagattcctggttccgcagc
aacgtggccgacgtttcgttcgtgcaggataatgaatcgctatcagccgagccggggacc
gtaagaggcttgcattttcaactgcaccccttcgcgcaaggcaagcttgtgcgctgcctg
cggggcgcgctcctcgatgtggccgtcgatatcaggcagggttctgcgacctacggcaaa
tgggtctccgcagagctctctcccgaaaatggcgcgcaactttgggtgccgggcggattt
gcacatggcttcatcaccttgcagcccgatacgatcataagctacaaggtcaccgctccc
tatagcgcggagcatgaccgcggggtgcggtgggacgatcccgccatagggatccggtgg
ccgcggatggatgcctacattctttctgacaaggacggcaaacagccgctgctttccgaa
cttcctccctattttcaattttcgtga
DBGET
integrated database retrieval system