Rhizobium binae: J2J99_30080
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Entry
J2J99_30080 CDS
T07180
Symbol
nifA
Name
(GenBank) nif-specific transcriptional activator NifA
KO
K02584
Nif-specific regulatory protein
Organism
rbq
Rhizobium binae
Pathway
rbq02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rbq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
J2J99_30080 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rbq03000
]
J2J99_30080 (nifA)
Transcription factors [BR:
rbq03000
]
Prokaryotic type
Helix-turn-helix
Other families
J2J99_30080 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
HTH_8
AAA_2
AAA
Mg_chelatase
AAA_3
DUF3369
GAF
AAA_16
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QSY86124
LinkDB
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Position
p4:192695..194254
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AA seq
519 aa
AA seq
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MIKPEARLHILYDISKELISSFPLDNVLKAAMNALVEHLLLRDGGIVIHGSGGEPWINVR
APIGHDVRSRSLTLEQADAINRVIASGEKHFGKNSAVLPVKVNRKAIGALWIDFAQKSGD
QDETLLAMIAVLIGLTCQRYRESCSDGGSVAEEQQAGQIPKIKPKPQPTHLDKIDWIVGE
SPALKRVLATTKIVAATNSAVLLRGESGTGKECFARAIHALSIRKSKAFIKLNCAALSET
VLESELFGHEKGAFTGALLQRAGRFELANGGTLLLDEIGDVSPQFQAKLLRVLQEGEFER
LGGTKTLKVDVRVICATNKDLEVAVLRGEFRADLYYRINVVPIILPPLRQRDGDISLLAQ
VFLEQFNKANDRNCDFAPSAIDILSKCAFPGNVRELDNCVQRTATLASSNTITSSDFACQ
QDQCSSALLWKDARDGTGNGPVHSLNPRDTMLGGLGANVGTPSGAAATIEAAGLTERDRL
INAMVKAGWVQAKAARILGKTPRQVGYALRRHRIDVKKE
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaccagaggcgcggctccatatactctacgacatatccaaagagcttatctct
tcttttcctctcgacaacgtgctgaaggctgccatgaacgccctcgtcgagcatctgcta
ttgcgcgatggcggaatcgtgattcacggctccggaggagagccctggataaacgtacgg
gctcccattgggcacgatgttcgctcacgttctctgacgcttgaacaggcggacgcaata
aatcgtgtcatcgctagcggtgagaagcactttgggaaaaattctgccgttctccccgtt
aaagtaaaccggaaagcaattggcgcattgtggattgatttcgcgcagaaaagcggagat
caggacgaaacccttctggcaatgattgccgtcctgatcggcttaacctgccagcgctat
cgcgaatcgtgcagcgatggcggctcagtcgccgaggaacaacaagcaggacagattccg
aaaatcaagccgaagcctcaacccacccacctcgacaaaatcgactggatcgttggggag
agccccgcgctcaagagggtattagctaccaccaagatcgtggccgcgacgaactccgcg
gtgctcttgagaggagagagcggcactggcaaggaatgctttgcaagagcaatacacgcg
ttgtcgatacggaaaagcaaggcatttattaagttgaattgcgccgcgctgtcggaaacc
gttctggaatccgaattgtttggccatgagaagggcgctttcactggcgctctccttcaa
cgagctgggcgtttcgaactggccaatggcggaacgctgttgcttgatgaaattggcgat
gtatccccacaattccaggcgaagttattgcgcgtcttgcaggaaggcgaattcgaacgt
ctcggcggaacgaagacattgaaagtagacgttcgagttatctgcgccaccaacaaggac
cttgaagtggccgtccttcgaggggagttcagagccgacctctattaccggatcaatgtg
gtgccgatcattttgccgccacttcggcagcgcgacggtgacatttcgcttctagcgcaa
gtgttcctcgagcaattcaacaaggcaaatgatcgaaattgcgacttcgccccgtcggcc
atagacattttgtcgaaatgcgccttccccggcaatgttcgcgagctggacaactgcgtt
caaaggaccgccactctcgccagttcaaataccatcacttcatcggattttgcctgtcag
caagaccagtgttcttcggcgctcctctggaaagacgcccgcgacggcactggcaacggc
ccggtgcatagtctcaacccgcgagatacaatgttaggcggactgggggccaacgtaggt
actcccagcggtgccgcagccacaatcgaggcagcgggtctcactgagcgtgatcggctg
atcaatgcaatggtgaaggctggctgggtacaggccaaagcggctcgtatcctgggtaag
acgccgcggcaggtcggctatgcgctacgccggcatcgtatcgatgtgaagaaagagtga
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