Rhodobiaceae bacterium SMS8: RHODOSMS8_00395
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Entry
RHODOSMS8_00395 CDS
T05596
Symbol
strM
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
rbs
Rhodobiaceae bacterium SMS8
Pathway
rbs00521
Streptomycin biosynthesis
rbs00523
Polyketide sugar unit biosynthesis
rbs00541
O-Antigen nucleotide sugar biosynthesis
rbs01100
Metabolic pathways
rbs01110
Biosynthesis of secondary metabolites
rbs01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
rbs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
RHODOSMS8_00395 (strM)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
RHODOSMS8_00395 (strM)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
RHODOSMS8_00395 (strM)
Enzymes [BR:
rbs01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
RHODOSMS8_00395 (strM)
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Motif
Pfam:
dTDP_sugar_isom
DUF4278
Motif
Other DBs
NCBI-ProteinID:
AWY99948
UniProt:
A0A2Z4UG57
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All DBs
Position
complement(392730..393290)
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AA seq
186 aa
AA seq
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MARFCTTDTGFDRLIQVSHPALSDRRGSLTRLFCKEELRELGFDSDIAQINLTHTAKAGT
FRGFHYQVPPHSEIKMITCIRGEVQDIVIDLRAGSATYLKHFSTVLSAENERSLIVPKGF
AHGFQSLCDDCEMLYFHSAMHEPSSEAGVNYKDPRLSIQLPLEISCVSERDLSFALIDSN
FRGISL
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcttttgtacaacggacaccgggttcgaccgcttaatccaagtcagtcaccct
gccttatcagaccgccgcggttctctcacgcgcctcttttgtaaagaggagcttcgcgag
ttgggatttgatagtgacattgcgcaaataaacctgacgcacaccgcgaaggccggtact
tttcgtggtttccactatcaggttccaccacattcggaaatcaagatgatcacctgtatc
cgcggcgaggtgcaggacatcgttattgatttacgtgctggatccgcgacttacctgaaa
cacttttcaaccgtcctctcagctgagaatgaacgaagcctcattgttccgaaaggtttc
gctcatggtttccagagcctctgcgacgattgtgaaatgctctactttcattcagcgatg
catgagccttcttctgaagctggcgttaactacaaagaccctcgcctctccatccagctc
ccgttggagatttcctgtgtttccgaacgcgatctgtctttcgccttgattgacagtaac
tttagaggcatttccctatga
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