Rhodobiaceae bacterium SMS8: RHODOSMS8_03288
Help
Entry
RHODOSMS8_03288 CDS
T05596
Symbol
ltxA
Name
(GenBank) leukotoxin
Organism
rbs
Rhodobiaceae bacterium SMS8
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
HemolysinCabind
Cadherin_5
Cadherin_4
Big_9
DUF642
Motif
Other DBs
NCBI-ProteinID:
AWZ02798
UniProt:
A0A2Z4UNV7
LinkDB
All DBs
Position
3313869..3322775
Genome browser
AA seq
2968 aa
AA seq
DB search
MADETNREDEAEVGNGGENGSSSDDLFVFDEAGTPGKRREETEADLTGLDGARAADDVTN
PNIHMGIERGEAELPEGGTLGGAPETDTDPKSAASSDQAGGERSDTTSERDPLVAADVDP
TLQAEDGLNGPMGPSPAAESLLDEPEMDRDTMDMKLSKMDGADISEGEFAQNNAGAASLF
VEPDLPPSAFNKAPEEVELSNNSFDENAPGAIVGTLSTNDAGEHTYEVSDARFEVVDGVL
KLRPGLSLNHEAEPSVALTVTVTDDGGLSFTQDFTLIVGDVNEGPESVDWTPLPFDENVE
GASVGIVHVTDPDNGETFTYTISDPRFEVVEQNGRTELRLKDGESLDAEQGGVPVTVTVT
DSGGETATTSVTVTPTDVNEGPSDIALSNSSVDENAAGVVVGSLSTTDVDAGDSHTYAVD
DARFEVVGGDLKLKDGVSLDHETESSVAVEVTTTDASGATYSETFTIAVGDVNEGPSDIA
LSNASVDENAAGAVVGSLSTTDVDDGDTHTYAVDDARFEVVGGDLKLKDGVSLDHESESS
VAVEVTTTDASGATYSETFTIAVGDVNEGPSDISLSNASVDENAAGAVVGSLSTTDVDDG
DTHTYAVDDARFEVVGGDLKLKDGVSLDHETESSVAVEVTTTDASGATYSETFTITVGDV
NEGPSDISLSNASVDENAAGAVVGTLSTTDVDAGDSHTYAVDDARFEVVGGDLKLKDGVS
LDHETESSVAVEVTTTDASGATYSETFTIAVGDVNEGPSDIALSNASVDENAAGAVVGTL
STTDVDDGDTHSYAVDDARFEVVGGDLKLKDGVSLDHEAESSVAVEVTTTDASGATYSET
FNIAVGDVNEGPSDISLSNASVDENAAGAVVGSLSTTDVDDGDTHTYAVDDARFEVVGGD
LKLKDGVSLDHETESSVAVEVTTTDASGATYSETFTIAVGDVNEGPSDIALSNASVDENA
AGAVVGSLSTTDVDDGDTHTYAVDDARFEVVGGDLKLKDGVSLDHEAESSVAVEVTTTDA
SGATYSETFTIAVGDVNEGPSDISLSNASVDENAAGAVAGSLSTSDVDDGDTHSYAVDDA
RFEVVGGDLKLKNGVSLDHETESSVAVEVTTTDASGATYSETFTIAVGDVNEGPSDISLS
NASVDENAAGAVVGTLSTTDVDAGDSHTYAVDDARFEVVGGDLKLKDGVSLDHESESSVA
VEVTTTDASGATYSETFTIAVGDVNEGPSDIALSNTSVDENAAGAVVGSLSTTDVDAGDS
HTYAVDDARFEVVGGDLKLKDGVSLDYNTDPSVDVTVTTTDSAGATYQETFSISVGDTND
APTDISLDNLSVDENAAGAVVGTLSTTDVDAGDSHTYAVDDARFEVVGGDLKLKDGVSLD
HETESSVAVEVTTTDASGATYSETFTIAVGDVNEDPSDISLSNASVDENAAGAVVGSLST
TDVDAGDSHTYAVDDARFEVVGGDLKLKDGVSLDHETESSVAVEVTTTDASGATYSETFT
IAVGDVNEGPSDISLSNASVDENAAGAVVGSLSATDVDAGDSHTYAVDDARFEVVGGDLK
LKDGVSLDHESESSVAVEVTTTDASGATYSETFTIAVGDVNEGPSDIALSNSSVDENSAG
AVVGSVSTTDVDAGDTHTYAVDDARFEVVGGDLKLKDGVSLDHETESSVAVEVTTTDASG
ATYSETFTIAVGDVNEGPSDISLSNASVDENAAGAVVGSLSTTDVDDGDTHSYSVDDARF
EVVGGDLKLKDGVSLDHETESSVAVEVTTTDASGATYSETFTIAVGDVNEGPSDISLSNA
SVDENAAGAVVGSLSTTDVDDGDTHSYSVDDARFEVVGGDLKLKDGVSLDHETESSVAVE
VTTTDASGATYSETFTIAVGDVNEGPSDIALSNSSVDENAAGAVVGSLSTTDVDAGDSHT
YAVDDARFEVVGGDLKLKDGVSLDHETESSVAVEVTTTDASGATYSETFNIAVGDVNEGP
SDIALSNASVDENAAGAVVGSLSTADVDDGDTHSYAVDDARFEVVGGDLKLKDGVSLDHE
AESSIAVEVTTTDASGATYSETFTITVGDVNEGPSDISLSNASVDENAAGAVVGTLSTTD
VDAGDSHTYAVDDARFEVAGGDLKLKNGVSLDHETESSVAVEVTTTDASGATYSETFTIA
VGDVNEGPSDIALSNASVDENAAGAVVGSLSTADVDDGDTHSYAVDDARFEVVGGDLKLK
DGVSLDHETESSVAVEVTTTDASGATYSETFTIAVGDVNEGPSDISLSNASVDENAAGAV
VGSLSTTDVDDGDTHSYSVDDARFEVVGGDLKLKDGVSLDHESESSVAVEVTTTDASGAT
YSETFTIAVGDVNEGPSAGAVDLGATNEDTSVIITSAQLLANSSDVDDGDAMSVSSLSVD
AQYGSLADNGDGTWTFTPANDVSADNVPFSFTVTDGEVSDSAAATLDIAAVADTPNLSIG
TVSTTTTLIDSSFEGSSTGFVSTSDGWSTDSDAIEVWSESGDGHSASDGDKFVELNNDAI
DNYDDADDIYQNVETVDGATYTLTFDLSPREGYDASVNRIEVVWDGVVVDTIALDGSSNS
DNVWTSYSYTMTGDGDTSKLQFREAGVDQDYGRGMRIDNIKLTETVDGAAGRAGTAIDLP
DVTASLSDTDGSETLALSIGNIPDGAVLTDGSNTFTASSGSTTADVSGWNLTTLQITPGS
DTSGPLNLSVTATSTEGSNGSTSVDAGQISVTVSPASDTVLTDITDPGDTMPALSGATYT
SDDDWDGSSGDNTVIYNGSDSDNKLDGHDGDDIIVDDNTKGELKGGDGDDTLYGRGGDDK
LKGEDGNDTLYGGSGDDKLEGKDGDDILFGGSGDDELKGGEGEDVLFGGSGDDTLKGEDG
SDLFIFETGNGDSDYIDGGSSSSWTDTIQLQANGGGYNEMDWTLNLDSGSSIESTGNGSY
DLSEDASGTITFADGSEISFDNIERIEW
NT seq
8907 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgaaacgaatcgtgaagacgaagcagaggtcggaaacggcggcgagaacggg
tcatccagtgacgacctattcgtctttgatgaggcgggtactccaggcaagcgtagggaa
gaaaccgaagcggacctgaccggcctggacggtgcacgcgccgctgatgatgtcaccaat
cccaacatccatatgggtattgaacgcggtgaggctgaacttccggaaggcggcacactt
ggcggtgcaccggaaactgataccgatccaaaatccgcagcctccagtgaccaggcgggg
ggcgaacgttcagacacgaccagtgagcgcgacccactggtcgccgcagacgttgatcct
actttgcaggcggaagatggcctgaatggtccgatgggtccgtcgcccgctgctgaaagc
cttctcgacgagcctgaaatggaccgggatacaatggacatgaagctgtccaaaatggac
ggcgctgatatctcggaaggtgagtttgcacaaaacaatgcaggtgccgcctctctattc
gttgagcctgaccttccgccatcagcgtttaacaaggcaccggaagaagttgagctaagc
aacaacagtttcgatgaaaatgcgccaggcgcaattgtcgggacgctctctaccaacgac
gcaggcgaacatacctatgaagtgagtgacgcccggttcgaggtggtcgacggtgtattg
aaattgcgcccaggtctcagcctcaatcatgaagcggaaccgtccgtcgcactcactgtt
acagtgacggatgacggtggcttgtcctttactcaggatttcacgctcatcgtgggcgat
gtgaacgagggcccggaatccgtcgattggacgccgcttccgtttgatgaaaatgttgaa
ggcgcgtccgttggcattgtgcatgtgaccgacccggacaatggtgagacgttcacctac
acgatttccgatcctcgatttgaagtggtggagcagaatggccgcaccgaattacgtctg
aaggacggtgaaagcctggatgcagaacagggcggtgttcctgtaacagtgacagtaact
gactctggtggcgaaacagcgaccacttctgtcactgtcacaccgaccgatgtgaacgaa
ggcccaagcgacattgcgctttccaactcaagcgttgacgagaacgccgctggcgtagtg
gtcgggtctttgagcaccacggacgtcgatgctggcgatagccatacctatgcggtcgat
gatgccaggttcgaggttgtcggtggcgatctgaagcttaaagacggtgtctctctcgat
catgagacggaaagctctgtggccgttgaagtcaccacgaccgatgcgtctggcgcgacc
tattctgagaccttcaccatcgccgtgggcgatgtgaatgaaggaccaagcgatattgca
ctgagcaatgcgtctgtggacgagaatgccgccggtgctgtggtcggctctctgagcacg
actgacgttgatgacggtgacacacacacatatgctgtcgacgatgcccggttcgaagtg
gtcggtggagacctgaagctcaaagacggtgtctctctcgatcatgagtccgagagctct
gtggctgttgaggtcacgacgaccgatgcgtctggagcaacttattccgagaccttcacc
attgctgttggcgatgtaaatgagggtccgtcagacatcagcctatcgaatgcctcagtt
gacgagaatgctgccggtgctgtggtcgggtctctgtcgacgacagacgttgatgacggt
gacacacatacttatgctgtcgacgatgcccggttcgaagttgttggtggcgatctgaag
ctcaaggacggtgtctctctcgatcatgagacggaaagctcagtcgccgttgaggtcacc
acgaccgatgcctctggtgcgacctattctgagaccttcaccattacggttggtgatgtg
aacgagggtccgtcagatatcagcctgtcgaatgcctctgtggacgagaacgccgcgggc
gctgttgtcggcacgctctcaacgacagacgtcgatgctggcgacagccacacctatgcg
gtggatgatgccaggtttgaagttgtcggtggagacctgaagctcaaagatggtgtgagc
ctggatcatgagactgagagctctgtggctgtcgaggtcaccacgacagatgcgagtggg
gcgacctattctgagaccttcaccatcgccgttggcgatgtgaatgaaggaccaagcgat
attgcactgagcaatgcgtctgttgacgagaacgccgcgggcgctgttgttggcactctg
tcgacgacagatgtcgacgatggtgatacacactcttacgcggtcgatgatgcccgcttt
gaagtggtgggcggagacctcaagctcaaagacggtgtgagcctggatcacgaagctgag
tcctcagtggccgttgaggtcaccacgacagacgcgtccggtgcaacttactccgagacc
ttcaatatcgccgtcggtgatgtgaacgaaggaccttctgacatctcgctcagcaatgcc
tccgtagacgagaatgcagctggcgcagtggtcggatctttgagcacgactgacgttgat
gacggtgacacacacacatatgctgtcgacgatgcccggttcgaagtggtcggtggcgat
ctgaagctcaaagatggcgtctctctcgatcatgagactgaatcgtcggttgctgtcgaa
gtcaccacgacggatgcgtctggtgcgacctattctgagacctttaccatcgccgtgggc
gatgtgaatgaaggaccaagcgatattgcactgagcaatgcgtctgtggacgagaatgcc
gccggagccgttgttgggtctttgagcacgacggacgttgatgacggtgacacacacaca
tatgctgtcgacgatgcccggtttgaagtggtcggtggcgatctgaagctcaaagacggt
gtgagcctggaccacgaagccgagagctctgtggctgttgaggtcaccacgacggatgcc
tctggtgcgacctattccgagaccttcaccatcgccgttggggatgtgaacgaaggtccg
tctgacatcagcttgtcgaatgcctccgttgatgagaatgctgccggtgctgtggccggt
tcgctctccacatctgacgttgatgacggtgacacacactcctatgcggtcgatgatgcc
cgctttgaagtggtcggtggcgatctgaagctcaaaaatggtgtgagcctggatcatgag
actgagagctctgtggctgtcgaggtcaccacgacagatgcgagtggggcgacctattct
gagacgttcactatcgccgtgggcgatgtgaatgaaggtccgtctgacatcagcctgtcg
aatgcctctgtggacgagaacgcagctggtgcggttgtcggcacgctctcaacgacagac
gtcgatgctggcgacagccacacctatgcggtcgatgatgcgcgctttgaagttgtcggt
ggcgatctgaagctcaaagacggtgtgagcctggatcatgagagtgagagctctgtggcc
gttgaagtcaccacgaccgatgcctctggcgcgacctattccgagaccttcactattgcc
gtgggcgatgtgaacgagggtccatctgacattgcgctttccaacacaagtgttgatgag
aacgcagctggcgcggtggttgggtctctgagcaccacggacgtcgatgctggcgacagc
cacacctatgcggtggacgatgcgcgctttgaagttgtcggtggcgatctgaagctcaaa
gatggcgtaagtctggactacaacacagatccgtctgttgatgtgacggtgacaacaacg
gattccgcaggcgcaacctaccaggaaactttttcaatttctgtgggtgacaccaatgat
gcgccaactgacatttctctcgacaatctctctgtcgatgagaacgcagctggtgcggtt
gtcggcacactctcaacgacagacgtcgatgcaggcgacagccatacctacgcggtggat
gatgcccgctttgaagtggttggtggcgatctgaagctcaaggacggtgtctccctcgat
catgagactgaatcgtcggttgctgtcgaagtcaccacgaccgatgcctctggtgccaca
tactccgagacctttaccattgccgtgggcgatgtgaatgaagacccgtcagacatctcg
ctcagcaatgcatctgtggacgagaatgccgctggggccgttgtcggatcgctctccacg
acagacgtcgatgctggcgacagccatacctacgcggtggatgatgcgcgctttgaagtt
gtcggtggcgatctgaagctcaaggacggtgtctctctcgatcatgagacggaaagctct
gtggccgttgaagtcaccacgaccgatgcgtctggagcaacttattccgagaccttcacc
attgccgttggggatgtgaatgaaggtccgtcagacatcagcctgtcgaatgcctccgtt
gacgagaatgccgccggtgctgtggtcggttcgctctccgcgacggacgtcgatgctggc
gacagccacacctacgcggttgatgatgctaggtttgaagttgtcggtggcgatctgaag
ctcaaggacggtgtgagcctggatcatgagagtgaatcgtcggtagctgtcgaggtcacc
acgacagatgcgtctggagcaacctattccgagaccttcaccattgccgtgggcgatgtg
aatgaaggtccgagcgatattgctctctccaactcaagtgttgatgagaactcagccggt
gctgtggtcggctctgtgagcacgacggacgtggatgcaggcgacacacacacatacgcg
gttgatgatgctaggtttgaagttgtcggtggcgatctgaagctcaaggacggtgtctct
ctcgatcatgagactgaatcgtcggttgctgtcgaagtcaccacgacggatgcctctggt
gcgacatattccgagaccttcaccattgctgtgggcgatgtgaacgagggtccatcagac
atcagcctgtcgaatgcctctgtggacgagaatgccgctggggccgttgtcggatcgctc
tccacgacagacgtggatgatggtgacacgcactcatatagcgtggatgatgcgcgcttc
gaagttgtcggtggtgatctgaagctcaaggacggtgtctctctcgatcatgagactgaa
tcgtcggttgctgtcgaagtcaccacgacggatgcctctggtgcgacatattccgagacc
ttcaccattgctgtgggcgatgtgaacgagggtccgtcagacatctcgctcagcaatgca
tctgtggacgagaatgccgctggggccgttgtcggatcgctctccacgacagacgtggat
gatggcgatacacatagctacagcgttgacgatgcccgctttgaggttgttggtggggat
ctcaagctcaaggacggtgtgagcctggatcatgagactgaatcgtcggtagctgttgag
gtcaccacgaccgatgcgtctggtgcgacctattctgagaccttcactattgctgtgggc
gatgtaaacgaaggtccgagcgacattgcgctttccaactcaagcgttgacgagaatgca
gctggagccgttgttgggtctttgagcacgacagacgtcgatgctggcgacagccacacc
tatgcggtggatgatgccaggtttgaagttgtcggtggagacctgaagctcaaagatggt
gtgagcctggatcatgagactgagagctctgtggctgtcgaggtcaccacgacagacgcg
tctggtgcaacttactccgagaccttcaatatcgccgtcggtgatgtgaacgaaggacca
agcgatattgcactgagcaatgcgtctgttgacgagaatgcagctggagccgttgttggg
tctctgagcactgctgatgttgatgacggtgatacgcactcttacgcggtcgatgatgcc
cgctttgaagtggtgggcggagacctcaagctcaaagacggtgtgagcctggatcacgaa
gctgagtcttctattgctgtagaggtcaccacgaccgatgcctctggtgcgacctattct
gagaccttcaccattacggttggtgatgtgaacgagggtccgtcagatatcagcctgtcg
aatgcctctgtggacgagaacgccgcgggcgctgttgtcggcacgctctcaacgacagac
gtcgatgctggcgacagccacacatacgctgtcgacgatgcccggttcgaagttgccggg
ggagacctcaagctcaaaaacggtgtctcgcttgatcatgagactgagagctctgtggct
gtcgaggtcaccacgacagatgcgagtggggcgacctattctgagaccttcaccatcgcc
gtgggcgatgtgaatgaaggaccaagcgatattgcactgagcaatgcgtctgttgacgag
aatgcagctggagccgttgttgggtctctgagcactgctgatgttgatgacggtgatacg
cactcttacgcggtcgatgatgcccgctttgaagttgtcggcggagacctcaagctcaaa
gacggtgtctccctcgatcatgagacagagtcgtccgttgctgtcgaagtgaccacgacc
gatgcgtccggtgcgacctattctgagacgttcaccatcgccgttggggatgtaaacgaa
ggtccgtcagacatcagcctctcgaatgcctctgtggacgagaatgccgctggcgcggtt
gttgggtctctgagcaccacagacgttgatgacggtgatacgcactcttatagcgtcgac
gatgcccgctttgaagttgtcggtggcgatctcaagctcaaggatggcgtcagtctggat
catgagtccgagagctcagtagctgtcgaagtcacgacgaccgatgcgtccggtgcgacc
tattctgagaccttcaccatcgctgtgggcgatgtgaatgaaggcccaagtgctggtgct
gttgatcttggtgcaaccaatgaagacacgtctgtgatcatcaccagcgcacagctactt
gcaaactctagtgacgtagatgatggcgatgcaatgagcgtcagttccttgtcggttgat
gcccaatatggatccctcgccgacaatggcgatggaacctggacctttacaccagcgaat
gatgtgagcgcagacaatgttcccttctccttcaccgtgactgatggtgaggtgagcgat
agcgcagcagcgactcttgatattgcggctgttgccgacactccaaatctctcaattgga
acggtctccacgacaacaacgcttatcgactccagtttcgaaggcagctctactggcttt
gtatccacatctgacggctggagcacagacagcgatgccattgaagtctggagcgagagt
ggcgatggccattcagcctctgatggcgacaagtttgtcgaactcaacaatgacgcgatc
gacaattatgatgatgctgatgatatctaccagaatgtcgagaccgttgatggtgcaacc
tacacgctgaccttcgatctctccccacgcgaaggctatgacgcgtctgtcaacaggatc
gaggtcgtctgggatggcgttgttgttgatacaatcgcgcttgatggatctagcaattct
gacaatgtctggacaagctacagctacaccatgacaggcgatggtgacacgtcgaagctt
cagttccgcgaagccggtgtcgaccaggattatggccgcggcatgcggatcgacaatatt
aaattgacagaaaccgtagacggcgctgcaggacgtgccggaacggcaatcgatctccct
gatgtcactgcatctctgagcgacactgatgggtctgaaacacttgcactgtctatcggc
aatataccagatggcgctgtgctcaccgatgggtcgaacacgttcactgcatcaagtggg
agcacgaccgctgatgtttctggctggaacctgacgacgctccaaattacacctgggtcg
gatacatctgggccattgaatctttcagtcacggcgacgtcaacggaaggctcgaatgga
tcgacaagcgtcgacgctggccagatttcagttacagtctctccggcaagcgatacggtg
ctgactgatatcaccgaccccggcgacactatgcccgccctgtcaggtgccacttatacc
tctgacgacgactgggacggctccagcggtgataacacggtcatctacaacggctctgac
agcgacaataagctggacggtcacgacggagatgacatcattgttgacgataacaccaag
ggtgagctcaagggcggcgatggcgatgatacgctttatggtcgcggcggcgacgacaaa
ctgaagggtgaagatggcaacgacacgctctatggtgggtctggcgatgacaaacttgaa
ggcaaagatggcgacgatattctcttcggtgggtctggcgatgatgaactgaaaggcggc
gagggcgaagacgtgctctttggcggctctggcgatgacacgctgaaaggcgaagacggt
tctgacctctttatcttcgaaaccggcaatggtgacagcgactatattgatggcggcagc
agcagcagctggacagacacaatccaactgcaggccaatggcggcggctataacgaaatg
gattggacgctgaacctggacagtgggtcttcgattgagagcacaggcaacgggtcttac
gatctgtcagaagatgcgtctggtaccattaccttcgccgatggttcggagatctccttc
gataatatcgagcgcattgaatggtga
DBGET
integrated database retrieval system
