Rugosibacter aromaticivorans: PG1C_06960
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Entry
PG1C_06960 CDS
T03689
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rbu
Rugosibacter aromaticivorans
Pathway
rbu03030
DNA replication
rbu03430
Mismatch repair
rbu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rbu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PG1C_06960
03430 Mismatch repair
PG1C_06960
03440 Homologous recombination
PG1C_06960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rbu03032
]
PG1C_06960
03400 DNA repair and recombination proteins [BR:
rbu03400
]
PG1C_06960
Enzymes [BR:
rbu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PG1C_06960
DNA replication proteins [BR:
rbu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PG1C_06960
DNA repair and recombination proteins [BR:
rbu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PG1C_06960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_16
AAA_5
AAA_14
TsaE
AAA_18
AAA_24
AAA_30
AAA_2
nSTAND3
PIF1
AAA_19
DUF3646
Mg_chelatase
TIP49
AAA_assoc_2
T2SSE
AAA_28
NTPase_1
AAA_7
SKI
Herpes_Helicase
AAA_29
ABC_tran
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
AJP48271
UniProt:
A0A0C5JLL0
LinkDB
All DBs
Position
1428225..1429883
Genome browser
AA seq
552 aa
AA seq
DB search
MSYQVLARKWRPKSFATLVGQEHVVRALTHALEQNRLHHAYLFTGTRGVGKTTLARIMAK
ALNCEAGVTSTPCGVCTSCTEIDSGRFIDYIELDAASNRGVDDMTQLLDRATYAPTIGRY
KVYVIDEVHQLSGHAFNAMLKTLEEPPAHVKFILATTDPQKIPVTVLSRCLQFNLKQMSQ
SSIVDHLSQVLAAETIPFELPALRHLAKGAAGSMRDALSLLDQAIAHGAGQVTEESVRAM
LGTVGDEYLFALLDGLLAQDIHAMLAVAKQMDAGSFSFDGGLQELATLFHRIALAQFAPE
ALIDEAERSRLTVYAQALDAEFLQLAYQIAIHGRDELALAPDEYAGFVMTLLRLHAFRPE
RKAPSAGFALPVKTAPIKTQPTKAASAATPQGNSRSGVSPAPSFSTSPVVAPDPVIAEAS
APAHADEDWHAQVAKLSLSGMAKQLAQHCELTQLTGTAILLRLSPVHKHLLGTVQQDKLQ
AELQSHYGRKLRLEIEVAEPASVTPAERSRTAQRERQDRAIAAIEQDPFVREVVDLFDAS
IDESTIKSITRE
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggtactcgctcgtaaatggcgccccaaatctttcgccacgctggtgggg
caagaacacgtcgtacgtgcgctgacccatgcgctggaacagaatcgcctgcatcacgcc
tatttgttcactggtacacgcggcgtgggcaaaaccaccctggcgcgtatcatggccaaa
gcgctcaactgcgaagcgggtgtcacatcaacgccctgcggcgtgtgcacttcctgtacg
gaaatagacagtggtcgatttatcgattacatcgagttggatgccgcctcaaatcgcggt
gtggacgatatgactcagttgcttgatcgcgcaacgtatgcgccaacgattggccgttac
aaggtttacgttattgacgaagtacaccagctctccgggcatgcctttaatgccatgtta
aaaacgctggaagaacccccggcgcatgtcaaatttattctggcaaccaccgatccgcaa
aaaattccggtgacagtgctgtcccgctgtctgcaattcaacttgaagcagatgtcgcaa
tcatcgattgtggatcatctgtcgcaggtgttggcggctgaaaccattccgttcgagcta
cctgctttgcgtcatttggctaaaggggccgcaggcagtatgcgtgatgcgctctcgctg
cttgaccaagcgattgctcatggtgctggccaagtgaccgaagagagtgtgcgtgccatg
ctgggcacggtaggcgacgagtatttattcgcactcctggatggtttgctggcgcaggat
atacacgccatgctggcggtggcaaaacagatggatgcggggagtttttcgtttgatggg
ggtttgcaagaattagccaccctgtttcatcgtattgcgctcgcccaatttgcgcctgag
gctttgattgatgaagcagagcgtagccgtttaactgtttacgcgcaggcactggatgct
gaatttttgcaactggcgtatcaaatcgctatccatggccgggatgagctggcgttagcg
ccggatgaatatgctggttttgtgatgaccttgctacggttgcatgcctttcgtccggag
cgaaaggcaccatctgccgggtttgcgctgccagtaaagactgcaccaataaaaacgcag
ccaacgaaggcggcgtctgctgccactcctcaaggaaacagtcgaagcggcgtatcacca
gcaccgagtttttccacgtcaccggttgtggccccagatcccgttatagcagaggctagt
gcgccagcgcatgcggacgaagactggcacgcacaggtggcaaaactttcgctgagcggt
atggccaagcaactggcgcagcactgtgagctcacgcaactgaccggcaccgccatcctg
ttgcggctgtccccggtgcataaacacttgcttggcacggtgcagcaagacaaacttcaa
gcggagttgcaatcccattacgggcgaaagcttcgtctggaaattgaagtcgctgagcct
gccagcgtgacaccggctgaacgcagtcgcaccgcgcagcgtgagcgtcaagatcgtgcc
attgccgcgattgagcaagacccttttgtgcgcgaagtggtcgatctattcgatgccagc
atcgatgaatcaacaattaaatcaataactagggagtaa
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