Rhodococcus pyridinivorans TG9: CEJ39_17565
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Entry
CEJ39_17565 CDS
T05830
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
rby
Rhodococcus pyridinivorans TG9
Pathway
rby00190
Oxidative phosphorylation
rby03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rby00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
CEJ39_17565
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CEJ39_17565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rby03019
]
CEJ39_17565
Enzymes [BR:
rby01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
CEJ39_17565
Messenger RNA biogenesis [BR:
rby03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CEJ39_17565
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase
PP_kinase_C
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
AWZ25735
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All DBs
Position
3721940..3724135
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AA seq
731 aa
AA seq
DB search
MTNGDSPDPTSSEHAAPSGAARPAGRVATATSAPPAATGLQSRTDHDNTLPVDRYLNREQ
SWLDFNARVLALAEDTSQPLLERAKFLAIFASNLDEFYMVRVAGLKRRAETGLSVRSADG
LTPRAQLALIASSTRELAGRHAQVFLDSVMPALAAEGISIIRWADLTEDERRRLTQYFAD
QVFPVLTPLAVDPAHPFPYISGLSLNLAVTVKDSQSSGEHFARVKVPDNVDRFVRVDRAG
SSHGLPAFLPLEELIAAHLDVLFPGMEIVEHHAFRVTRNADFEVEEDRDEDLLQALEREL
ARRRFGSPVRLEVSDDMTEHMLDLLLRELDVDRVDVVQLPGLLDLSSLWQVHAVDRPDLK
DAPFVPATHPAFGERETPKSVFSTLREGDILVHHPYDSFSTSVQRFIEQAAADSQVLAIK
QTLYRTSGDSPIVNALIAAAEAGKQVVALVEIKARFDEQANIKWARKLEQAGVHVVYGLV
GLKTHCKTCLVVRREGSTIRRYCHIGTGNYNPKTARLYEDVGLLTSSPEIGADLTDLFNT
LTGYSRKAQYRNLLVAPHGVRKGIIERVEREIEHHAAGRPSGIRLKANALVDEQVIDALY
RASRAGVRTEVVVRGICALKPGVPGLSENITVRSILGRFLEHSRLFHFRGSDEYWIGSAD
MMHRNLDRRVEVMVQVKNTRLAAQLDGIFDSALDPVTRCWILEGDGTWTASPEPGTAARD
HQVELMRSRAS
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaacggcgattcccccgatcccacgagttccgagcacgcggcaccatccggtgcc
gcacgacccgccggtcgcgtagcgaccgccaccagcgcccctccggccgcgacgggactg
cagtcgaggaccgatcacgacaacacacttcccgtcgaccgctatctcaaccgcgaacag
agctggctcgatttcaacgcccgcgttctcgcgctcgcggaggacacctcgcagccgttg
ctcgaacgcgccaagttcctcgcgatcttcgcgtcgaatctcgacgagttctacatggtg
cgggtcgccgggctgaaacgtcgcgccgagacggggttgtcggtccggtccgcggacgga
ctgaccccgcgcgcccagctcgcgctcatcgcgtcgagcacgcgcgaactcgccggtcgc
cacgcgcaggtcttcctcgactcggtcatgcccgccctggcggccgaaggcatctcgatc
atccgatgggcggatctgacggaggacgaacgccgacgactgacacagtatttcgccgac
caggtcttcccggtcctgacgccgctcgcggtcgatcccgcacaccccttcccgtacatc
agcggcctgtccctgaacctcgctgtcacggtcaaggattcgcagtcgtccggtgaacac
ttcgcgcgcgtgaaggtgcccgacaacgtcgatcggttcgtccgggtcgatcgcgcgggt
tcgtcgcacggactgccggccttcctcccgctcgaggagctgatcgccgcccatctcgac
gtgttgttcccgggcatggagatcgtcgagcaccacgcattccgcgtcacccgcaacgcc
gacttcgaggtcgaggaggaccgcgacgaggatctccttcaagccctcgaacgcgaactc
gcccggcggcgcttcggatctcccgtgcggctcgaggtgtcggacgacatgaccgagcac
atgctcgacctcctgttgcgcgaactcgacgtcgatcgggtggacgtcgtccagttgccc
gggctgctcgatctgtcgtcgctgtggcaggtgcacgccgtcgaccgaccggatctgaag
gacgcccccttcgtgccggcgacccatcccgccttcggcgagcgagagacaccgaagagc
gtgttctccaccctgcgcgagggcgacatcctcgtccaccacccgtacgactcgttctcc
acgagcgtgcaacggttcatcgagcaggccgccgccgacagccaggtcctcgcgatcaag
cagacgctgtaccggacgtcgggcgactcccccatcgtcaacgccctgatcgccgctgcc
gaagcgggcaagcaggtcgtcgcgctcgtggagatcaaggcacgcttcgacgagcaggcc
aacatcaagtgggcgcgcaagctcgaacaggccggtgtccacgtcgtatacggactcgta
ggtctgaagacacactgcaagacctgtctggtcgtgcggcgcgagggttcgacgatccgc
cgctactgccacatcggcaccggcaactacaacccgaagaccgctcgtctctacgaggac
gtcggcctgctcacgtcgtcacccgagatcggcgccgacctcaccgacctgttcaacacc
ctcaccggatactcccggaaggcgcagtaccgcaatctgctcgtcgcaccgcacggagtc
cgcaagggcatcatcgaacgcgtcgagcgtgagatcgagcaccacgcggccggtcgcccc
agcgggatccggctcaaggccaacgccctcgtcgacgagcaggtgatcgacgcgctctac
cgcgcgtcgcgggcgggggtgcggaccgaggtggtcgtgcgcgggatctgtgccctcaag
ccgggcgtgcccggcctgagcgagaacatcacggtgcgctcgattctggggcggttcctc
gaacattcgcggttgttccatttccggggcagcgacgagtactggatcggtagcgccgac
atgatgcaccggaacctcgaccgtcgcgtcgaggtgatggtgcaggtgaagaacacccgg
ctcgcagcgcagttggacggcatcttcgattccgcgctcgacccggtcacccgctgctgg
attctcgagggcgacggcacctggacggcgtcccccgagccgggaaccgctgcccgcgac
caccaggtcgaactcatgcgtagtcgtgcgtcctga
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