Roseiflexus castenholzii: Rcas_0555
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Entry
Rcas_0555 CDS
T00585
Name
(GenBank) Laminin G sub domain 2
Organism
rca
Roseiflexus castenholzii
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_3
Toxin_R_bind_N
Laminin_G_2
Laminin_G_1
3keto-disac_hyd
Motif
Other DBs
NCBI-ProteinID:
ABU56685
UniProt:
A7NGT8
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All DBs
Position
737240..742033
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AA seq
1597 aa
AA seq
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MRTRLWVVGSFIGALLLIALAAPSVSEATIPNRQLWTHAPGTCGPALGGAVFGRAGDNCG
GSGTTFDSVNVESPVILRDIATAAAPCPGIAEGGVCYRMWYTGFDAGGVRRIGYAVSPDG
ATWTRVPGSAGGGAVLGPGPAGNFDNAGVSFPYVIRNGAVFEMWYNGFNGSVFTIGFATS
TDGATWTRVAGPLTQGAVLRPTSAATFDQAIVAAPAVIRDEASPQLPCENGRTSGVCYRM
WYQGTDAANVFRIGYALSPDGVNWMRAAGGNPVLGVGAAGEWDAGSVGAPVVLKDGALFR
MWYNSQASNQSIGHVVSTDGVTWVRPAPNQAVYRGADDPGTLSPDNVWTPFVIKEGAAFR
MWYTVSSRPNAVRVGQATMTPGMLLPAPALSRDLGEYTLLLTTQMIPPGGSVLLMLPASV
PFADVTVGTMSGFGAGATFTAERAAVTDAFAQGTARGALVIRLPDGAPAGVKTITFTLAN
PPSTPAIMTVQTFDVREVIEYATIDLSQATNVGPTATPTPVPPSPTSAPPTATATEGPTA
TATSTPTPTDTPQPPTATSTLLPTNTPQPPTATPAPTADPSNRQPWLHIPGTCPVSVEGA
VFTIAGQNCGGGGTSFDTSEIFPPMVLRDTATPALPCENGRTGGVCYRMWYVGVDGSGTR
RIGHALSPDGMTWTRFIGSGVGGSVFEPSGVPGDFDSTGVSTMYVVRDGNTFRMWYSGFG
NTGAIEGIGYATSPDGITWTRVPGTAGTGAPNRNAVLVERGGVNDFDQDYIVAPSVLIDE
ATPALPCENGRTSGRCYRMWYEGVNNVSAYVFAIGYAVSPDGINWTRIPGGSGGAVLARI
NNFTDFDSNSVGVPTVIKDGAFFRMWYEAKSYATPAFSTGYVVSTDGVNWVRPIPNNPVF
TGADDPGTFSPDGVWAARALKLGSSYRKYYTVGLRPNARRFGLAQMTPGAPLGSVALSVS
GNLYTLSFTTASFIPAGGSVLISLPPDVDFAQVTPGAISGFGAGATLVADPAAVTDAASG
GVARGALLIRLPNGAPAGPKTVQFTLGAPPPSTAPLLVQTFDLREVLEYGEVLMDGTPPL
ATLTATPAPPTNTPTPVPPTATPTAGPSATPTAVTPTATTTPSGSGALRFDGVNDEVRGG
QIAGLGGAQTIELWVRPATAGQNSVIIAHSDDNTGWSLELNGGRVTWWVASTGGWRAAQH
PTALVANTWYHVAVTYDGATARVFVNGAPGSAATIGAITQGPFLRIGGLTGYGFFNGDLD
DVRISNVARYSGAFTPPSTAHPADANTRALYRFDEGSGQTTSDASGNGYHLTLGASGGAD
SADPLWVASTAPIAPPPPTATPTPVPPTNTPTATSLPPTATPTGTAGPNPTPFPPTNTPT
ATATPIPPSNNALRFDGVNDEVRGGQIAGLGGAQTIELWVRPATAGQNSVIIAHSDDNTG
WSLELNGGRVTWWVASTGGWRAAQHPTALVANTWYHVAVTYDGATARVFVNGAPGSAATI
GAITQGPFLRIGGLTGYGFFNGDLDDVRISNVARYSGAFTPPSTAHPADANTRALYRFDE
GSGQTTSDASGNGYHLTLGASGGADSADPLWVASTAP
NT seq
4794 nt
NT seq
+upstream
nt +downstream
nt
atgcgtactcgtttgtgggtggtggggtcgttcattggcgctctcctgttgattgcgttg
gcagcgccatcggtgagcgaagcgacgattcccaatcgtcaactctggacgcatgcgcca
ggaacgtgtggtcctgcgctgggaggcgcggtgttcggtcgtgctggcgataattgcggc
ggaagcggtacgaccttcgacagcgtcaatgtcgaaagtccggtcattctgcgcgatatt
gccactgcggctgcgccatgccccggcattgccgaaggcggtgtgtgttaccgcatgtgg
tataccggcttcgacgctggtggtgtgcgacgcatcggctatgccgtttcgccggatggc
gcaacctggacgcgcgtgccggggtccgcaggcggcggcgcggtgctcggtcctggaccg
gcgggcaacttcgataacgctggcgtctcgtttccgtatgtcattcgtaacggcgccgtc
ttcgagatgtggtacaacggctttaacggctcggtcttcacgattggcttcgccacctcg
accgacggtgcgacctggacgcgcgtcgcaggaccgctgactcagggcgccgtcctgcgt
ccgaccagcgccgccacattcgatcaggcgattgttgccgctcccgccgtgatccgcgat
gaagcctcgccgcaactcccctgtgagaatgggcgcacgagcggcgtgtgttatcggatg
tggtatcagggcactgacgcggcaaatgtctttcgcatcggctacgccctttcgcccgat
ggcgtgaactggatgcgcgcagcgggtgggaacccggtgctcggtgtcggcgcggccggc
gaatgggatgcgggcagcgtcggtgcgccggtggtgttgaaggatggcgcgctctttcgc
atgtggtacaacagccaggcgtccaaccagagtatcgggcatgtggtatcgactgacggc
gtgacgtgggtgcgtccggcgccaaaccaggcagtgtatcgcggcgccgatgatccaggg
acgctttcgcccgacaatgtgtggacgccgtttgtcataaaggaaggtgccgccttccgc
atgtggtacacggtcagcagccgcccgaatgccgtgcgcgttggtcaggcgaccatgacg
ccgggaatgttgctgcctgcgccggcgttgagccgtgaccttggtgaatataccctgttg
ctgactactcagatgatccccccgggtggcagtgtgctgctgatgttgcccgcttccgtg
ccgttcgccgatgtgaccgtgggaacgatgtccggctttggcgccggtgcgaccttcact
gccgaacgtgcggcagtgaccgatgcgtttgcgcagggaacggcgcgcggtgcactcgtc
atccgcttgcccgacggcgcccccgcaggcgtcaagacgatcacattcacactggcaaat
ccgccctcaacgcccgccattatgacagtgcagacgttcgatgtgcgcgaagtgatcgag
tacgcaaccatcgatctgtcacaggcgacgaatgtcggtccaactgcaacgccaacgcct
gtgccgccgtccccgacgtcggcgccgccgactgcgaccgccacagagggaccaacagca
acggcgaccagtacgccgaccccgacagataccccacaaccgccaacggcgaccagcaca
ctcttgccaaccaacaccccgcaaccgccgacggcaaccccggcgccgaccgccgatccg
tcgaaccgtcagccatggttgcacatccccggcacatgcccggtatccgtggaaggtgca
gtctttacaattgccggacagaactgcggcggcggcggcacaagtttcgacacgtcggaa
atcttcccgccgatggtgctgcgcgataccgccacgccggcgctgccgtgcgaaaacggg
cgtaccggcggcgtctgctaccgcatgtggtatgtcggcgtggacggcagcgggacgcgg
cgcatcggtcatgccctctcgccggatggcatgacctggacgcgcttcattggctcaggg
gtcggcggcagtgtcttcgagccgtccggcgtgcccggcgacttcgatagcactggcgtc
tcgaccatgtatgtcgtgcgtgatgggaacacgttccgcatgtggtacagcggctttggc
aatactggcgcaattgagggtatcgggtatgcgacctcgccggacggcatcacctggacg
cgcgtgccgggtactgccggaaccggcgcgccgaaccgcaacgctgttctggtcgaacgt
ggcggcgtcaatgacttcgatcaggattatatcgtcgcgccttcggtgttgatcgatgaa
gccactcctgcgctaccgtgcgagaatgggcgcaccagtggacgctgctatcggatgtgg
tatgagggcgtgaacaatgtcagcgcttatgtgttcgccattggctatgctgtatcgcct
gatggaatcaactggacgcggattcctggcggcagcggcggcgccgtccttgcgcgcatc
aataatttcaccgatttcgatagtaacagcgtcggcgtaccgacggtgatcaaggatggc
gcgttcttccgcatgtggtatgaggcgaaatcgtatgccacgccagccttctcaaccggg
tatgtcgtatcgaccgacggcgtcaactgggtgcgcccaataccgaacaatccggtcttc
accggcgccgacgatcctggcacgttttcgcccgatggcgtgtgggcggcgcgtgcgctg
aaactgggcagcagttaccgcaaatactataccgtcggtttgcgtcccaacgctcgacgc
ttcgggctggcgcaaatgacgcccggcgcgccgctcggctcggtcgcgctgagtgtgtcc
ggcaacctgtatacgctcagttttacaactgcttcctttattccggctggcggcagcgtc
ctgatcagcctcccgccggatgtcgatttcgcgcaggtaacgccgggcgcgatcagtggc
tttggcgcgggcgcaacgctggttgccgaccctgcggcggtgaccgatgccgcctccggc
ggcgtagcacgcggcgcgctcctcattcgcctgcccaatggcgcgccggcaggtccgaag
acggtgcagttcactctgggcgcgccgccgccttcgacggcgccgctgctggtgcagacc
ttcgatctgcgcgaagtactggagtatggcgaagtgctgatggatggaacaccgccgctg
gctacgctgaccgccacgcctgcaccgccaaccaacacccccacgcccgtaccgccaacg
gcaacgccaaccgccggaccgagcgccacgcccactgcggtgacgccaacggcgacaacg
acgccttccggtagtggtgcgctgcgcttcgacggggtgaatgatgaggtgcgcggcggg
cagatcgccgggcttggcggcgcgcaaaccatcgaactctgggtgcgcccggcgaccgct
gggcagaatagcgtcatcatcgcccacagcgacgacaacaccggctggtcgctcgaactg
aacggcgggcgcgtcacctggtgggtggcttcgactggtggctggcgcgcggcgcagcat
ccgacggcgctggtcgccaacacctggtatcacgttgcggtgacgtatgatggcgcgacg
gcgcgggtgttcgtcaacggcgcgcctggttcagcggccaccatcggcgcgatcacgcaa
ggaccgttcctgcgcatcggcgggctgacggggtacggcttcttcaacggcgaccttgac
gatgtgcgcatctcgaacgtcgcgcgctacagcggcgcgtttacgccgccgtcaacggcg
catccggcggatgcgaacacgcgcgcgctctaccggtttgatgaagggagcgggcagacc
accagcgatgcttcggggaacggctaccacctgacgcttggcgcaagcggcggcgccgac
agcgccgatccgttgtgggtggcgtccacggcgccgattgctccaccgccgccaaccgcg
acaccaacgccggttccgccaaccaacaccccaaccgccacatcgttgccgccaaccgcc
acacccaccggcacggcaggtccaaacccgacgccgtttccgccaaccaatacgccgacg
gcaaccgccactcccattccgccatcgaataacgcgctgcgcttcgacggggtgaatgat
gaggtgcgcggcgggcagatcgccgggcttggcggcgcgcaaaccatcgaactctgggtg
cgcccggcgaccgctgggcagaatagcgtcatcatcgcccacagcgacgacaacaccggc
tggtcgctcgaactgaacggcgggcgcgtcacctggtgggtggcttcgactggtggctgg
cgcgcggcgcagcatccgacggcgctggtcgccaacacctggtatcacgttgcggtgacg
tatgatggcgcgacggcgcgggtgttcgtcaacggcgcgcctggttcagcggccaccatc
ggcgcgatcacgcaaggaccgttcctgcgcatcggcgggctgacggggtacggcttcttc
aacggcgacctcgacgatgtgcgcatctcgaacgtcgcgcgctacagcggcgcgtttacg
ccgccgtcaacggcgcatccggcggatgcgaacacgcgcgcgctctaccggtttgatgaa
gggagcgggcagaccaccagcgatgcttcggggaacggctaccacctgacgcttggcgca
agcggcggcgccgacagcgccgatccgttgtgggtggcgtccacggcgccgtag
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