Roseiflexus castenholzii: Rcas_3842
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Entry
Rcas_3842 CDS
T00585
Name
(GenBank) extracellular solute-binding protein family 5
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rca
Roseiflexus castenholzii
Pathway
rca02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rca00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rcas_3842
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rca02000
]
Rcas_3842
Transporters [BR:
rca02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Rcas_3842
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
XylR_N
BTG
Motif
Other DBs
NCBI-ProteinID:
ABU59879
UniProt:
A7NQN3
LinkDB
All DBs
Position
complement(5021678..5023384)
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AA seq
568 aa
AA seq
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MNDRCSDQGEQKVRRIDRRAFLRLVAAGGGALALQACGGGAPPAAAPTTAPAAPTVAPAA
PTAAPAAPTAAPAAPTAAPVASNARGGKVTWAMLGDPVSLEPYGINITGQYNYEAREPMY
DSLLVWDRDLKVQPSLAESFETPDDTTYIFNLRSGVKFHNGRELTAEDVKFSLDTIINPP
DGRNPGAAFFANFDTIEVVDPLTIRINLKKIDPTIPGLFAWSRYTNIFPTDMPSQINPVT
QAIGTGPFRLVSYTPNAEIVYERFSDHWNPEQPNIDQLIYRVIPEEDARIAALRSGDIDG
TDVTPLGARRLQNDSDITILKGLYSQPKVLQFTLKGGKPWDIKEVRQAISLTIDRQELID
KVMEGEAELTGPVVPGYGDWPLSQDELRAAYQVDVEKARQLMAQAGYADGFKVTAMTFAN
YSNDNAIIVQEQLRQLNIDMQIEQIEFGTFAQRVTNGEFEWCFTARGMRADVSGYLNDFR
RLGIAEKNWFPAWENAELNEAYDAAMATFDQAKRRELMQKVQRIVINEAPHIYLYQDYRF
SAVRKRVQNYYVAFTTFRPALREIFVTA
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaccgatgctctgatcagggagaacaaaaggtgcgtcgaatcgatcggcgcgcg
ttcctgcgtcttgtggcggcaggcggaggtgcgctggcattgcaggcttgcggtggcggc
gctccacccgctgctgcgccgacgaccgcccccgctgcaccgacggttgccccggctgcg
ccgacggctgctcctgccgcgccgacggctgctcctgccgcgccgacggctgcacccgtt
gcatcgaacgcgcgcggaggcaaagtcacctgggcgatgcttggtgatccggtgtcgctc
gaaccatacggaatcaacatcacgggccagtacaattacgaagcgcgcgagccgatgtat
gactcgctgctcgtgtgggatcgcgatctgaaagtacagccatcgctggcagagtcgttc
gagacgccggacgatacgacctatatcttcaatctgcgttcgggcgtgaaattccacaac
ggcagggaactcaccgccgaggatgtcaaattctcgctcgataccatcatcaatccgcct
gacggacgcaaccccggtgcagcattcttcgccaatttcgacacgattgaggtcgttgac
ccattgacgattcgcatcaatctgaagaaaatcgacccgaccattcctgggttgttcgcc
tggtcgcgctatacaaacatctttcccaccgacatgccgtcgcagatcaatcccgtgacc
caggcgatcggcaccggtcccttccgattggtcagttatacgcccaacgccgaaatcgtc
tatgagcgcttctccgatcactggaaccccgaacagccgaacatcgatcaattgatctat
cgcgtcatccctgaggaagatgcccgcattgcggcactgcgctccggcgatatcgacggg
acggacgttacgccgttaggtgcgcggcgactccagaacgactccgacatcaccattctg
aaaggtctctactcgcagccgaaggtgcttcagtttacactgaagggcgggaaaccgtgg
gacatcaaagaagtgcgccaggcgatcagtctgaccatcgaccgccaggaactgatcgac
aaggtgatggaaggcgaggcggaactgacgggaccggtcgtgcccggctatggcgactgg
cccctcagccaggatgaactgcgcgccgcgtaccaggttgatgtcgaaaaggcgcgccag
ttaatggcgcaagccggttatgccgacggcttcaaggtgacggcgatgaccttcgccaac
tactcgaacgataatgccatcattgtacaggaacaactgcgccagttgaacatcgacatg
cagattgaacagatcgagtttggcacattcgcgcagcgcgtcaccaatggcgagttcgag
tggtgctttacggcgcgcggcatgcgcgccgacgtgagcggatacctgaacgacttccgt
cgtctgggcattgccgagaagaactggtttcccgcctgggagaacgctgagcttaatgag
gcgtatgatgcagcaatggcgacgttcgatcaggcaaaacgacgcgaattgatgcagaaa
gtgcagcgcatcgtcattaatgaagcgccacacatctatctctaccaggactaccgtttc
tcggcggttcggaagcgggtgcagaattactacgtcgccttcacgacgttccgccccgcg
ctgcgcgaaatctttgtgaccgcgtaa
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