Rhodospirillum centenum: RC1_2432
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Entry
RC1_2432 CDS
T00785
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rce
Rhodospirillum centenum
Pathway
rce03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RC1_2432 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rce03019
]
RC1_2432 (recQ)
03400 DNA repair and recombination proteins [BR:
rce03400
]
RC1_2432 (recQ)
Enzymes [BR:
rce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RC1_2432 (recQ)
Messenger RNA biogenesis [BR:
rce03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RC1_2432 (recQ)
DNA repair and recombination proteins [BR:
rce03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RC1_2432 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
RecQ_Zn_bind
HRDC
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
ACI99816
UniProt:
B6IUJ1
LinkDB
All DBs
Position
2509289..2511121
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AA seq
610 aa
AA seq
DB search
MPDALPLTPTPDARTVLRNVWGYPDFRGMQAAIVEQVIAGGDALVLMPTGGGKSLCYQIP
ALVRPGVGIVVSPLIALMRDQVDALRQLGVRAAYLNSTLDWREALEVERACERGGLDLLY
VAPERLVTPRFLDLLERSRIALFALDEAHCVSQWGHDFRPEYLQCSILHERFPDVPRIAL
TATADAQTRADIVERLGLGGAEVFAASFDRPNITYRVQTKDNERRQLLDFIRHRHGEDAG
IVYCMSRGKVESVAQWLREQGIDALPYHAGLEAETRQANQDRFIKAEGVVMVATVAFGMG
IDKPNVRFVVHMDPPRSLEAYYQETGRAGRDGLPAEALMLYGFQDVVQLRQWVEASDAPA
RHKRTERQKLEALLGFCETARCRRQTILTYFGEEAPQPCGNCDTCFTPVATYDGTVEAQK
ALSAVYRTGQRFGVGHLIDVLRGLATEKVVERGHEKLKTFGVGRDLSKAEWQSVYRQLVA
HGFLCADPEGHGGLMLTEAATPVLKGQEAVRLRKDPAAEARRTLRPGRSGPSERLSPADD
ALWHELKALRLELARDQGVPPYVIFHDATLMEMVRARPLDAVGLGLLPGVGSRKLDRYGE
EFLEVIRRHA
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacgcccttcccctgacgccgacccccgacgcgcggaccgtcctgcgcaatgtc
tggggctatccggacttccggggcatgcaggccgcgatcgtggagcaggtgatcgccggc
ggcgatgccctggtgctgatgccgaccggcggcggcaagtcgctgtgctaccagatcccg
gcgctggtccggcccggcgtgggcatcgtcgtcagcccgctgatcgccctgatgcgcgac
caggtggacgcgctgcgccagctcggggtgcgcgccgcctacctcaactcgaccctggac
tggcgcgaggcgctggaggtggagcgcgcctgcgagcgcggcgggctggacctgctctac
gtggcgccggaacggctggtgacgccgcgcttcctggacctgctggagcggtcccggatc
gcgctgttcgcgctggacgaggcgcactgcgtcagccagtggggccacgatttccggccc
gaatacctgcaatgctcgatcctgcacgagcggttccccgacgtgccgcggatcgccctg
acggccacggccgatgcgcagacgcgggccgacatcgtggagcggctgggcctggggggg
gcggaggtgttcgccgccagcttcgaccggccgaacatcacctaccgcgtccagaccaag
gacaacgagcggcggcaactgctggacttcatccgccaccgccatggcgaggatgccggc
atcgtctactgcatgtcgcgcggcaaggtggagtccgtggcccagtggctgcgcgaacag
ggcatcgacgccctgccctaccatgccgggctggaggcagagacgcgccaggccaaccag
gaccgcttcatcaaggccgaaggcgtggtgatggtggcgacggtggccttcggcatgggc
atcgacaagcccaacgtccgcttcgtcgtccacatggacccgccgcgcagcctggaggcg
tactaccaggagaccggccgcgccggccgcgacgggctgccggccgaggcgctgatgctg
tacggcttccaggacgtggtgcagctccgccagtgggtggaggcgtccgacgccccggcc
cggcacaagcgcaccgagcggcagaagctggaggcgctgctgggcttctgcgagacggcg
cgctgccggcgccagaccatcctgacctatttcggggaggaggcgccgcagccctgcggc
aactgcgacacctgcttcaccccggtggccacctacgacggcacggtggaggcgcagaag
gccctgtccgccgtctaccgcaccggccagcgcttcggcgtgggccacctgatcgacgtg
ctgcgcgggctggcgaccgagaaggtggtggagcgcggccacgagaagctgaagaccttc
ggcgtcggccgcgacctgtccaaggcggagtggcagagcgtctaccgccagctcgtggcg
cacggcttcctctgcgccgatccggaggggcacggcgggctgatgctgaccgaggcggcg
acgcccgtgctgaagggacaggaggcggtgcggctgcgcaaggacccggcggcggaggcg
cgccgcaccctgcgtccgggccgcagcggaccgtccgagcggctgtcgcccgccgacgac
gcgctctggcacgagctgaaggcgctgcggctggagctggcgcgggaccagggcgtgccg
ccctacgtcatcttccacgacgccaccctgatggagatggtgcgcgcccgcccgctggac
gcggtggggctgggcctgctgcccggggtgggcagccgcaagctggaccgctacggcgag
gagttcctggaggtcatccgccgccacgcctga
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