Ruminococcus champanellensis: RUM_01060
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Entry
RUM_01060 CDS
T02600
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
rch
Ruminococcus champanellensis
Pathway
rch00521
Streptomycin biosynthesis
rch00523
Polyketide sugar unit biosynthesis
rch00541
O-Antigen nucleotide sugar biosynthesis
rch01100
Metabolic pathways
rch01110
Biosynthesis of secondary metabolites
rch01250
Biosynthesis of nucleotide sugars
Module
rch_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
rch00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
RUM_01060
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
RUM_01060
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
RUM_01060
Enzymes [BR:
rch01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
RUM_01060
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Gene cluster
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
CBL16376
UniProt:
D4L9T1
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Position
complement(120077..120685)
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AA seq
202 aa
AA seq
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MGQIKVDQHVGGIQGLCIIQPAVHGDSRGYFMETYNQNDMQEAGLDIAFVQDNQSCSTKG
VLRGLHFQKQFPQTKLVRVIRGSVFDVAVDLRSNSATYGKWFGVELTAENKKQFLIPKGF
AHGFLVRSEIAEFCYKCDDFYHPGDEGGLAWNDPAIGIDWGVTGTYPGSASGSGYTLPDG
TGLMLSEKDQLWLGIQDTFKFN
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgggacagatcaaggtcgatcagcatgtaggcggcatccagggactatgcatcatccag
cccgccgtgcatggggacagcaggggctattttatggaaacctataaccagaacgatatg
caggaagccggactggacattgcctttgtacaggataaccagtcctgctccacaaagggt
gttctgcgggggctgcactttcagaagcagttcccccagaccaagctggtacgggtcatc
agaggcagcgtgtttgacgttgccgtagacctgcggagcaattcagcaacctacggcaag
tggttcggcgtagagctgaccgccgagaacaagaagcagttcctgattccaaagggcttt
gcacacggcttcctggtgcgcagcgagatcgccgagttctgctataaatgcgacgacttc
tatcaccccggggatgagggcggccttgcctggaatgacccggctatcggcatcgactgg
ggcgtaaccggcacatatcccggctccgcctccggcagcggctataccctgccggacggt
accggactgatgctcagcgaaaaggatcagctgtggctgggcattcaggatacgttcaag
tttaactaa
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