Ruminococcus champanellensis: RUM_01860
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Entry
RUM_01860 CDS
T02600
Name
(GenBank) Hemolysin-type calcium-binding repeat (2 copies).
Organism
rch
Ruminococcus champanellensis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HemolysinCabind
HCBP_related
Motif
Other DBs
NCBI-ProteinID:
CBL16439
UniProt:
D4L9Z4
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All DBs
Position
188629..191295
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AA seq
888 aa
AA seq
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MIRSTQAPGDDVVYGDAGDDAIIGGEGNDLIYGGDGNDTIEGNTGNDTIYGGSGNDTITG
NEGDDMLYGGDGNDMLDGGEGNDILDGGEGDDSLSGGTGDDTLSGGDGDDTYYINADHGN
DTIYDSEGRSTLVFGDELSAEDYALRIDIHSGISLVHHETGETISIPDFINMPEYYDFTF
DGEAQIIGGGDSRQVIEGTDEDDVITGGSGFNIIKGGDGNDTITGGDNLNFIYGGDGDDT
ITGGNGINIIRGEGGDDTITDGTGDGYLDGGDGNDTIHAGAGNDILIGGAGNDRLFGEDG
DDVIAGNDGDDYLSGGDGNDTLYADAGNDELHGGNGNDSLFGGDGDDTLYGDAGDDYLEA
GNGTDTLYGGTGNDIFVGGEGINYIYGEDGNDTFYGGNGLNYMYGGDGDDNFTGGELADY
IEGGAGNDTMNGGNGNNEMYGGDGDDYIYGGDGDDYIYGGNDDDYIEGGNGDDHLYGGNG
VNTIYGGAGNDIIYSGDHGSFLYGGDGNDRIYAGGGADVLDGGAGNDYLQGDHGGDTYIF
GIGYDIDTINASADLNTIRIHGYTVADMHNTRMANNDLVIDFGEGTGDRLVIQGFFNFNS
NRDFNFVFDDETVLGQYDIQAASAPIIGTDADEWLAIQGNDGGVIHAGAGNDGLSGGSGN
DELYGEAGNDTLYGNDGNDMLDGGAGNDSLNGGNGEDTYIFAKGYAQDTINEWGSDHSIV
MLTDINSDEITVSDQWGSNLLISVNGTDDVLTISNFKWGQSTFTFKFADGAEGYVDKDTW
QLVLTKQPDEIEDTEQVNAELLESLYADDTCLSDLLTDGSTVITDMTESTVLTDENDDIS
DVTDIQAMLLAENMSAFGNNDQISDSVNITDITVDTSLTDSLLVGALQ
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgatacgatcaacgcaggctccaggtgatgatgtagtctacggcgatgcaggcgatgat
gccatcatcggcggtgaaggaaatgatcttatctatggcggcgatggtaacgacacgatc
gaaggcaacaccggaaacgatacgatttacggcggcagcggaaatgacacgatcaccgga
aacgaaggggatgacatgctctacggcggggatggaaacgatatgctggacggaggcgaa
ggaaatgacatccttgacggcggagaaggagatgattctctcagcggcggtacaggagac
gacacgctttctggcggcgatggcgatgatacctattacatcaatgctgaccacggtaac
gatacaatttacgactccgaaggacgcagcacacttgtgttcggcgatgagctgagtgcg
gaggactacgcattgcgtattgacattcacagcggcatttcgcttgtccatcacgagacc
ggagagacgatctctattccggatttcatcaatatgcccgaatactatgacttcacattt
gatggtgaagcgcagatcattggcggcggcgattctcgtcaggttatcgaaggtacggat
gaagacgatgtcattacaggtggcagcggattcaatattatcaaaggcggtgatggtaat
gataccatcacaggtggtgacaacctcaacttcatctacggcggagacggtgacgacact
atcactggtggcaatggcataaatatcattcgcggcgaaggcggagatgatacaattaca
gacggaaccggcgacggttatctggatggtggcgacggaaacgatacaatccacgctggc
gcaggcaatgatattttgattggcggtgccggaaacgaccggctcttcggcgaagacggg
gatgatgtaatcgcaggaaacgatggggatgattatctttcaggcggagacggcaatgat
acactctatgcagatgccggaaatgacgaactccacggcggtaacggtaatgattccctg
tttggcggggacggcgacgataccctctacggcgatgccggagatgactatctggaagcc
gggaacggtacggatacattgtatggcggcacaggaaatgacatctttgtcggcggtgaa
ggcatcaactatatctatggtgaggatggcaacgataccttctatggcggaaatggtttg
aactatatgtatggcggagacggtgatgataacttcactggcggagagcttgctgattac
atcgaaggcggtgccggcaatgataccatgaacggcggaaatggcaacaatgagatgtac
ggcggcgatggtgacgactacatttacggcggcgatggtgacgactacatttacggcgga
aacgatgatgactatatcgagggcggcaacggggatgaccatctctacggcggcaacggt
gtgaatactatttacggcggtgctggtaatgacatcatctacagcggcgatcacggcagt
ttcctctacggtggagacggtaatgaccggatctatgccggcggtggtgcagatgttctt
gacggaggcgcaggcaacgattatctccagggcgaccacggcggtgatacctatatcttt
ggtattggctatgacatcgatacaatcaacgcttctgccgacctgaacacgatccgcatc
catggctacacagtggctgatatgcataataccagaatggcgaacaacgaccttgtgatt
gactttggtgaggggacaggggacagactggtgatccagggcttcttcaacttcaacagc
aatcgtgacttcaactttgtgttcgatgacgagactgttcttggacagtatgatattcag
gctgcctctgcacctatcattggtaccgatgcggatgaatggcttgcaattcagggcaat
gacggcggtgtgatccatgcaggcgcaggaaatgacgggctcagcggcggcagcggaaat
gatgagctgtatggtgaagccggaaatgataccctttacggcaatgacggaaacgatatg
cttgatggtggtgcaggaaatgactccctcaacggcggtaacggcgaggacacctacatt
ttcgcaaagggctatgcacaggataccatcaatgagtggggcagcgaccacagtatcgta
atgctgacagacatcaactccgacgagatcactgtatccgaccagtggggctcaaatctg
cttatttctgtgaatggtacagatgatgtgctgaccatcagcaacttcaagtggggacag
tcaacattcacattcaagtttgccgatggtgcagaaggctatgtggataaggatacatgg
cagcttgtactgacaaagcagcctgacgagatcgaggataccgagcaggtaaatgcagag
cttctggaatctctgtatgcagacgatacatgcttgtccgatcttctcacggatggcagt
accgtgattaccgatatgaccgagagtacagtgcttactgacgaaaacgatgatatctcg
gatgtgacggatatccaggcaatgctccttgcagaaaatatgtctgcattcggcaacaat
gatcagatttccgacagcgtgaacatcactgacattacagtggatacttctctgacagat
tcactgcttgtaggcgcattacagtaa
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