KEGG   Methanocella arvoryzae: RCIX231
Entry
RCIX231           CDS       T00526                                 
Name
(GenBank) ATP-dependent RNA helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
rci  Methanocella arvoryzae
Brite
KEGG Orthology (KO) [BR:rci00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rci03400]
    RCIX231
Enzymes [BR:rci01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     RCIX231
    5.6.2.6  RNA 3'-5' helicase
     RCIX231
DNA repair and recombination proteins [BR:rci03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    RCIX231
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C ResIII AAA_25 AAA_19 PhoH AAA_22 Zn-ribbon_8
Other DBs
NCBI-ProteinID: CAJ35705
UniProt: Q0W7D8
LinkDB
Position
2518754..2521567
AA seq 937 aa
MGNVFELLDPRIREALSELGMTEPTGTQQKAIPAILSGGHVLLIAPTGTGKTESALLPAF
DLLMRMSSEEREGIKVLYITPLRALNRDMMKRMRWWAGRLDLNIDVRHGDTTTHERRRQA
LKPPDILITTPETVQAMLMGSRMRENLKSLAMVIVDEVHELASSKRGTQMAIALERLGRY
TEFRRIGLSATVGTPGEVAKFLAGTGREAQIVEVKLAKSLDFHVTYPETIDSDKPLSKKL
LTDPDIAAQIRTMIDLIKRNRSTLMFVNTRQSAEAIGARFRKLDQAIAVHHGSLSKEARI
EAEDSFKDGKVNALVCTSSMELGIDIGDIDHVIQYMSPREVSRLLQRVGRAGHSIGETSS
GTIITINEDDSAEAWAICRRASAGQIENINLYKKSYDALANQICAMALEYGDISATYVYE
TVCKAYPYAQLSRKEFDRVLQQLVEERLIFLSPEGLIGRKAKTRTYMYENLSMIPDEKRF
DVYDVITGRMIGTLDEAFVVNFADVGAIFITKGEMWRIVEVTEDRVRVEPIENPQGEVPS
WTGEEIPVPFSVAMEVGAIRRTVAEMAGSPEADIVRYLTSAYPTDEATARSYVRYVKKQV
AGNYPVPSDQLVTVEEEERTIMINACFGHKVNETLGRVVTALLASRFGGGVAMEIDPYRI
KLELPKRIRAADVAKMIADLEPIFVEPIIEKTLKNTLLLKWKMVHVARKFGALSRDVDYE
RISMEKLLNVFEGTPMYEEAVNEILHDKLDIDNAIKVLEKIRSGEIKVLTGRLSPIGDAG
FTGGRELMAPESADRSIVLALKERIMNDHVILFCLNCKQFSSKRKVKDVEERPVCPLCNS
RLIAALKPWEKEEADLVKKAAKNKLAEPEMVKVKRVYRNGNLVLSHGRVAVIALASRGLG
PESASRVIGRQREDEEDFYRDILKAERDYVRTRRFWA
NT seq 2814 nt   +upstreamnt  +downstreamnt
atgggtaatgtttttgagctgttagatccccgtatacgggaggcgctctccgaactcggg
atgaccgagccgacggggacgcaacagaaggctattcctgccattctgagcgggggccac
gttcttttgattgcgccgacgggcacgggcaagacggagtccgccctgctgccggcgttt
gatctgctgatgcggatgagctctgaggagcgggaaggcatcaaggtcctgtacattact
ccgctgcgggcgctgaacagggacatgatgaagcgtatgaggtggtgggcggggcgcctc
gatctgaacatagacgtgaggcacggcgataccaccactcacgagcggcggaggcaggcg
ctgaagccgcccgacatcctgatcaccactccggagactgtgcaggctatgctgatgggc
agccggatgcgggagaacctcaaaagcctcgccatggtgattgtcgacgaagtgcacgag
ctggcctcctccaaaaggggcacccagatggccatcgcactggagcggctgggccgatac
actgagttccggaggatcggcctgtctgccactgtgggcacgcccggggaagtggccaaa
tttctggcaggcaccggccgggaagcgcagatcgtcgaggtcaaactggctaaatctctc
gattttcacgtgacctacccggagaccatcgacagcgacaagcctctgtctaagaagctc
ctcaccgacccggatatcgccgcccagatccggaccatgatagacctgatcaagaggaac
cgctccaccctgatgttcgtcaacacccggcagtccgccgaggctatcggcgcccgtttc
aggaagctcgaccaggccatagcggtccaccacggctccttatccaaagaggcccgtatc
gaggcagaggactcgttcaaggacggcaaagtcaacgctctggtttgcacctcgtccatg
gagctgggcatcgacatcggcgacatcgaccacgtcatccagtacatgtcgccccgtgaa
gtttcccggctgctgcagcgtgtcggccgtgccggccacagcattggggagacatccagc
ggcacaatcatcaccatcaacgaagacgactcggctgaggcatgggccatctgccgcagg
gcttcagcaggccagatcgagaacatcaacctgtataaaaaatcgtacgacgcgctggcc
aaccagatctgtgccatggctctggagtacggcgatatcagcgctacctacgtctacgag
accgtatgcaaggcttacccctatgcgcagctatcccggaaagagttcgaccgggtacta
cagcagcttgtcgaagaacgcctgatctttttaagccccgaagggctcatcggcagaaag
gcgaagacccgcacatacatgtacgagaacctctccatgatcccggacgagaagcgcttc
gacgtgtacgacgtgatcaccgggcggatgatcggcacgctggacgaagccttcgtcgtc
aacttcgccgacgtgggcgccatcttcatcaccaagggcgagatgtggcggatcgtggaa
gtcaccgaagaccgggtccgggtcgagcctatcgagaacccgcagggagaggttccctcc
tggactggggaagaaatccctgttcccttctcggtagccatggaagtgggcgccatccgg
agaactgtggcagagatggcaggttcgccggaagccgacattgtcaggtacttgacttca
gcatatcctacggacgaggctaccgcgaggtcttacgtacggtacgtgaaaaagcaggtg
gccggcaattaccctgttccttccgatcagctggttacagtagaggaagaagagcggacg
atcatgatcaacgcgtgcttcggccacaaggtaaacgagaccctgggcagagtcgtcacc
gccctgcttgcctcccggttcggaggcggtgtggccatggagatcgatccgtaccggatc
aagctggagctgccgaagcgcattcgggccgctgacgtggcgaagatgatcgccgacctc
gagccgatcttcgtggagccgatcatcgagaagacgctcaagaacacgctgctgctcaag
tggaagatggtccacgtggcccggaagttcggcgccctgtcgagagacgtggactacgag
cgcatcagcatggagaagctgctgaacgtctttgaaggcacgcccatgtacgaggaagcg
gttaacgagatcctgcacgacaagctggacatcgataatgccatcaaagtgctggagaag
atccgctccggggagatcaaggtgctcaccggcaggctcagcccaatcggagacgccggc
ttcaccgggggcagagagctgatggcgcccgaatcggccgaccggtctatagtgctggcg
ctgaaggagcggatcatgaacgaccacgtgatcctcttctgcctgaactgcaagcagttt
tcatccaaacgaaaagtaaaggatgtcgaggagcggcctgtctgtcctctatgtaattcg
aggcttatagcggcgctcaagccgtgggagaaggaagaggccgacctggtgaagaaggcg
gcaaagaataagcttgccgagcccgaaatggtcaaggtaaaacgagtctaccgtaatggc
aacctggtgctctctcacggccgcgtcgccgtcatcgcactggcatccagaggcctcggc
cccgagtccgcctcacgggtgatcggcagacagcgcgaggatgaagaggacttctaccgg
gatatcctgaaggccgagagagactacgtccggacccgcaggttctgggcttaa

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