Riemerella columbina: NYR17_08285
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Entry
NYR17_08285 CDS
T09247
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
rcl
Riemerella columbina
Brite
KEGG Orthology (KO) [BR:
rcl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rcl02000
]
NYR17_08285
Transporters [BR:
rcl02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NYR17_08285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD-like_3
SusD_RagB
TPR_6
Motif
Other DBs
NCBI-ProteinID:
WKS96142
LinkDB
All DBs
Position
complement(1764965..1766275)
Genome browser
AA seq
436 aa
AA seq
DB search
MVFANGDNAEANLTGILSLLRYNFVNQDASNLGSVYFARTVRGEDFIVPSSWYSYDYRNI
TRLSVHRRANFTWDYFYTIIRQVNEFISGVNESTKISESGKKSLIARAKVLRALAYFELV
QDFQLGYSYAKDFPAIPIYETYSSEAHPLSTTKEVYEFIINDLETAIPELPQSRPSKAFV
NQQVGYALAARVYQVKKDWSKAYQYAELAYGGSVEATLDAAAYASGFNTLDSKEWILGYG
QQAGQSVYWTMAPHSFTDLSLENDGYSNAYISKSLYDLFSDTDIRKLFDYDPKASSYRQY
STHKFIFKRGEAACPYIRTPEMILIAAEAQYQLGNTTKAQEILYKLQKNRDPKAVEQHNT
GNALLEEILVERRKELYGEIGVELYDARRLSRPLKRSAYHLQPLDLKANDYKFIYQYPQQ
EIDANPYLDKNINANR
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggtatttgcaaatggcgataatgctgaagcaaatttaacaggaatattgagtttactt
cgttataactttgtaaatcaagatgcttctaatttgggaagtgtatatttcgcacgaaca
gtgagaggagaagattttatagtacctagttcttggtattcttatgattatcgtaatatt
acaaggttgtcagtgcatagaagagccaactttacttgggattatttttatacgataatt
cgtcaggttaatgagttcattagtggagttaatgaaagtactaagatatcagaatcagga
aaaaaatccttaatagcaagagccaaagtacttcgtgcattagcttattttgagttagta
caagattttcagttaggatactcttatgctaaagactttcctgctatacctatttacgaa
acctattctagcgaggcacaccctctaagcactacaaaggaagtgtatgaatttattatc
aatgatttagaaactgctattccagagttaccacagagcagaccttctaaggcatttgta
aatcagcaagtaggctatgcgctggcagccagagtttatcaagtgaagaaagattggtct
aaggcttatcaatatgcagaattggcatatggaggtagtgtagaggctacattagatgca
gcagcttatgcaagtggtttcaatactttagattccaaagaatggattttaggctatggg
cagcaagcagggcagagcgtatactggactatggcaccacattcttttacagacttgtca
ttggaaaatgatgggtatagcaatgcctatataagtaaaagtttatatgacttatttagt
gatactgatattagaaaactatttgattatgaccctaaagcaagttcttatagacagtat
agtacacataagtttatatttaaaagaggtgaagcggcttgcccttatataagaacacca
gagatgattcttattgcagcagaggcacaataccaattgggcaataccacaaaagcacaa
gagattctttataaactacaaaaaaatagagaccctaaagcggtggagcaacacaatact
ggcaatgcccttttagaagaaattttagtggaaagaagaaaagaactctatggagaaata
ggtgtagagctttacgatgcaagaagactttcaagaccgcttaaaagaagtgcataccat
ctacagcctttggatttaaaagccaacgattacaaattcatataccaatatccacaacag
gagatagatgccaacccttatttggataaaaacatcaatgccaaccgataa
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