Riemerella columbina: NYR17_08360
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Entry
NYR17_08360 CDS
T09247
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
rcl
Riemerella columbina
Pathway
rcl00521
Streptomycin biosynthesis
rcl00523
Polyketide sugar unit biosynthesis
rcl00541
O-Antigen nucleotide sugar biosynthesis
rcl01100
Metabolic pathways
rcl01110
Biosynthesis of secondary metabolites
rcl01250
Biosynthesis of nucleotide sugars
Module
rcl_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
rcl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
NYR17_08360 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NYR17_08360 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NYR17_08360 (rfbC)
Enzymes [BR:
rcl01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
NYR17_08360 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
WKS94928
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Position
complement(1780769..1781314)
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AA seq
181 aa
AA seq
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MKLTETPLKDCYLIEPTIFNDSRGYFYEKFNEKTFEKLTGQNGHFVQDNISKSSYGVVRG
LHLQKGEHAQAKLVSCLEGSVWDVAVDVRTGSETYGQWFGVELTAENKLQLYVPRGFAHG
FAVLSETAVFSYKCDNYYSRESEGGILWNDADLAIDWKLPIEDIMLSDKDKVQPTFVEKN
F
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaacagaaacgccactaaaagattgttaccttatagaacctaccatttttaat
gattctcggggatatttttacgaaaaattcaatgagaaaacctttgaaaagcttacaggg
cagaatggtcatttcgttcaggataatatttcaaaatcttcctatggcgtggttaggggc
ttgcatttacaaaaaggcgaacacgcacaagccaaattggtttcttgtttagaagggagt
gtttgggatgttgctgtagatgttcgcacaggttcggagacttatggacaatggtttggc
gtggagcttacagcagaaaataaacttcagctgtatgttcccagaggttttgctcacggt
tttgcggtattgagtgaaactgcggtgttttcttataaatgtgataattattacagccga
gagtctgaaggagggatattatggaacgatgctgatttagccattgattggaaacttccg
atagaagatattatgctttcggataaagataaagtacaacctacttttgtagagaaaaat
ttttaa
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