Rosa chinensis (China rose): 112165639
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Entry
112165639 CDS
T06020
Name
(RefSeq) heat stress transcription factor A-1 isoform X1
KO
K09419
heat shock transcription factor, other eukaryote
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rcn03000
]
112165639
Transcription factors [BR:
rcn03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
112165639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
CENP-F_leu_zip
APG6_N
XhlA
TMF_TATA_bd
DUF6261
DUF6212
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
112165639
NCBI-ProteinID:
XP_024158000
LinkDB
All DBs
Position
5:complement(21026608..21030341)
Genome browser
AA seq
492 aa
AA seq
DB search
MEDAATMINSATSIPPFLNKTYDMVDDPSTDYLVSWTDANNSFVVWNDAQFARDLLPKFF
KHNNFSSFVRQLNTYGFRKVHPDRWEFANEGFLRGQKHLLKTVNRRKPVNVQSHQQSAPV
PAPKVKSSQVAACVEVGKLGLEEEVERLKRDKNTLMQELISLRQEQQATDNQLQNVGQRV
QGMEQRQKQMMSFLAKAMHSPGFLSQLVQHQNESNRRITGSNKKRRLPRQEDEILVGKLS
SKTLDGQIVKYQPSMNEAAKAMLRQIMKMNISPRREPSMNNPDAFLIDNVPSSNVLDSRN
CSRNLGVTLSEVSPTYMTAESGFPVTCHSRATSQVQPSPSVATDCVTATQISEENIYNLQ
EDTVLPELTAMQGIAPPSTVEIPNANFMPSETVNTEYMDVSVLDQAMPTKTEVFSPEINP
DADVSQDGEPNLPGINDVFWDKFFDTDEIDLSSVVGVTKDQEMQSGKGNGWDKIQHISPI
APQQTGLEGMIG
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgcggcgacgatgatcaactcggcgacgagcatcccgccgtttctgaacaag
acctacgacatggtcgacgacccctccaccgactacttggtctcatggaccgacgccaac
aacagtttcgtcgtttggaacgacgcccagttcgcccgggacctgttgcccaagttcttc
aagcacaacaacttctccagcttcgtccgccagctcaatacttatggttttagaaaagtt
catccagaccgatgggaattcgcaaatgaagggtttctaagaggtcagaaacatcttttg
aagactgtcaataggcgaaagccagttaatgtacagagtcatcaacaatcagcaccagta
ccagcacctaaagtaaagagctcccaagttgctgcatgcgtagaggtgggaaaacttgga
ctggaggaggaggttgaaaggcttaaaagggacaagaacactcttatgcaggaacttatt
agtttgaggcaggagcagcaagcaacagataaccaattacagaatgttggtcaacgtgtg
cagggaatggaacagcggcagaagcaaatgatgtcatttcttgcaaaggctatgcatagt
cctggctttttatcccagcttgtacagcatcagaatgagagcaacaggcgcatcactgga
agcaacaagaaaaggagacttccgaggcaagaagacgaaattttggtggggaagcttagc
agtaaaactctggatggacaaattgtgaaataccagccttcaatgaatgaagcagcaaaa
gcaatgctacggcagattatgaagatgaatatatctcctaggcgggaaccgtcaatgaac
aatcctgatgcttttctgattgacaatgttccttcttccaatgtattagacagtaggaac
tgtagccggaatttgggagtcaccctttcagaggtttcaccgacttatatgacagcagaa
tctggatttcctgtcacttgtcattctagagctacttctcaggtccagccttccccttct
gtggctactgactgtgttacagcaactcaaatttcagaagagaacatctacaatcttcaa
gaagatacagttttgcctgaactaactgcaatgcaaggtattgccccaccaagcactgtg
gagatccctaatgcaaactttatgccctctgagacggtgaatacagagtacatggatgtg
tcagttttggatcaggcaatgcctacaaaaactgaggtcttttctcctgagatcaatcct
gatgcagatgtctcgcaagatggagagcctaaccttccgggaattaatgatgtcttctgg
gataagttttttgacacagatgaaattgatttgagttcagttgttggggtgaccaaggat
caggagatgcagtcagggaagggaaatggatgggacaagattcaacatataagtccaatt
gctcctcagcaaacagggcttgagggcatgattggttga
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