Rosa chinensis (China rose): 112166325
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Entry
112166325 CDS
T06020
Name
(RefSeq) ABC transporter B family member 9 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112166325
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rcn02000
]
112166325
04147 Exosome [BR:
rcn04147
]
112166325
04090 CD molecules [BR:
rcn04090
]
112166325
Enzymes [BR:
rcn01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
112166325
Transporters [BR:
rcn02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
112166325
Exosome [BR:
rcn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112166325
CD molecules [BR:
rcn04090
]
Proteins
112166325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
AAA_16
Zeta_toxin
AAA_22
AAA_21
RsgA_GTPase
AAA_15
AAA_30
nSTAND1
DLIC
Motif
Other DBs
NCBI-GeneID:
112166325
NCBI-ProteinID:
XP_024158912
LinkDB
All DBs
Position
5:complement(8521712..8527673)
Genome browser
AA seq
1266 aa
AA seq
DB search
MEGGGGDGDGRAKVSDPDKQKVPFYKLFLFADQYDVGLMIVGSICAIGNGLSQPFMTLIF
GSLINTFGHTDRAHIVPMISKVSLKFVYLGIGTGIAAFLQVSCWMVTGERQATRIRSLYL
KAILRQDIGYFDTETNTGEIIGRMSGDTILIQDAMGEKVGKFIQLLSTFVGGFVIALVKG
WLLTLVLLSCIPAIVFAGGIMAIIVSKMSTRGQRAYAEAGSIVEQTVGAIRTVASFTGEK
QAIEKYNKKLKVAYNSTVQQGLATGVGLGTFILIVFGTYGLAIWYGSKMIIEKGYNGGQV
INVIFAIMTGGMCLGQTSPSLNAFAAGTAAAYKMLETIKRKPKIDPYDTSGVVLDDIKGD
VELKDVYFRYPARPDVQIFAGFSLHVPSGTTTALVGQSGSGKSTVIGLVERFYDPEAGEV
LIDGVDLKKLHLRSIREKIGLVSQEPNLFTTTIRENIAYGKENATQEEIRRAIELANAAK
FIDKLPQGLDTMVGEHGTSLSGGQKQRIAIARAILKNPRILLLDEATSALDAESERIVQD
ALVRLMSNRTTIVVAHRLTTIRNADAIAVVHKGKIVEIGTHDDLTQNPEGAYSQLIRLQE
RAKEKGAEPSDPDNGLNIDRTMSRSGSQRLSAVRSLSKGSSGSRRSFTITSFGVPAPVNC
EVQVEEEDEENRVKTKVDPEQRKKVSIKRLAYLNKPELPVLLLGSIAAAGHGVIFPVFGL
LLSKAIKMFYEPHNELRKDSKVWAGVYVGIGFFGLFVIPGQNFFFGIAGGKLIERIRALT
FQKVVHQQISWFDDPANSSGAIGARLSSDASTVKALVGDALALIAQNIATIIAGLIIGFV
ANWRLALIIIAVSPLLIGQGILQTKFLKGFSADAKVMYEEASQVANDAIGSIRTVASFCS
EKKVMDTYEKKCEGPMKQGVRLGVVSGTGFGASFVVMFFTNALIFYVGAHLVKNGQATFE
QVFRVFFALTISAVGVSQSTGMAPDSNKAKDSAASIFQILDSKPKIDSSSDDGMTLPSIT
GEIDLDHVSFKYPTRPDVQIFRDICLKIPSGKTVALVGESGSGKSTVIGLIERFYDPDTG
SVLLDGVEIHKFKLNWLRQQIGLVGQEPILFNESIRTNIAYGKLGDATEEEIIAATTASN
AHNFISSLPQGYDTSVGERGVQLSGGQKQRIAIARAILKDPKILLLDEATSALDAESERI
VQDALDRVMVNRTTVVVAHRLTTIKGADIIAVVKNGVIAEKGSHDYLMRITDGAYASLVA
LHASAA
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaggaggaggagatggagatggaagagcaaaagttagcgatccagacaagcag
aaggtcccgttctacaagctgtttctgttcgcagaccaatatgacgtggggttgatgatc
gtcgggagtatctgtgccatcggaaacgggctgtcgcagccgttcatgacgctcatcttc
ggcagtcttatcaatactttcggacatactgaccgggctcatatcgtccccatgatttct
aaggtgtctctaaaatttgtgtacttgggcattggtactggcattgctgcatttctacag
gtatcatgttggatggtaactggggaaagacaggccactcgaattcgaagcttgtacttg
aaagcaattttaagacaggacattggatattttgacaccgaaactaacactggagagatc
attggcagaatgtcaggggacacaattctcattcaagatgccatgggagaaaaggtgggg
aagttcattcaactcctttcaacttttgtaggcggttttgtaattgctttggtcaaagga
tggcttctcaccctggtgttactgtcatgtattcccgctattgtctttgctggtggaatc
atggccattattgtttccaaaatgtcaacacgtggacagcgtgcttatgcggaagctggc
agtatagtagaacaaacagttggagccattcgaacagttgcatcttttaccggagagaag
caagcgatagaaaaatataacaagaagctaaaggttgcctacaatagtacagttcaacaa
ggacttgccacaggagttggacttggtacgttcatacttattgtctttggcacttatgga
cttgccatatggtatggatccaaaatgatcatcgaaaaaggatataatggaggccaagtc
atcaatgttatatttgcaataatgacgggtggaatgtgcctggggcagacatcaccgtct
ttgaatgcatttgcagctgggacagctgctgcatacaaaatgctcgagaccatcaaacga
aagccgaagattgatccttatgatacctctggagttgtattggacgatattaaaggagat
gtggagctcaaagacgtctatttcaggtaccctgccaggccggacgtgcagatttttgcg
ggattctcgttgcatgttccgagtggcacaacgactgctttggttgggcagagtggaagt
gggaagtcaaccgtgataggcttggtagagaggttttatgatccagaagctggtgaagta
cttatagatggtgtcgatttgaagaagttgcatctaagatcgataagggagaagattggg
cttgtaagtcaagagccgaatctttttactacaacaataagggagaacatagcatatggg
aaggaaaatgcaactcaagaagagattagaagagcaattgagctcgcaaatgcagcaaag
tttattgacaagttgcctcaggggctcgacacaatggtaggtgagcatggaacatcgtta
tcgggtggacaaaagcaaagaattgcaattgcaagagccattttaaagaaccctagaatt
ctacttctggacgaagcaacaagcgccttggatgctgagtcggagagaattgttcaagat
gcactggtgagattgatgtcaaatagaacgactatagttgttgcacatcgcttaacaacg
attaggaatgctgatgcaatagctgtggtgcataaagggaaaattgttgaaataggaact
catgatgacttgacccaaaacccagaaggagcttatagccaactaatccgcctgcaagaa
agagctaaagaaaaaggtgcagagccctctgatccagataatggtttgaatatagatagg
acaatgagtagatctgggagccagagactttcagcagtgagatctttaagcaaaggttca
tcaggtagtcggcgctcattcactattactagctttggtgttcctgctccagttaattgt
gaagtacaagtagaagaagaagatgaggagaaccgtgtgaaaacgaaggttgatccggag
caacgcaaaaaagtttccatcaaaaggctggcctatttgaataaacctgagcttccagtt
ttgctgcttggatctattgctgcagcaggtcatggagtgatttttcctgtcttcggctta
ctactctcaaaagccatcaagatgttctatgaaccgcataatgagctgcgaaaagactcc
aaagtttgggcaggagtgtatgttggtataggtttctttgggttgtttgttattccaggg
caaaatttcttctttggaattgcaggtgggaagctgatagagcgaattcgtgccttgaca
ttccaaaaagttgtacaccagcaaattagttggtttgatgatcctgcaaattcaagtggt
gctattggtgcaaggttgtcttctgatgcttcaactgtgaaggctcttgttggtgacgca
ttagccttgattgctcagaacatagcaacaatcatagcaggactgattataggtttcgta
gctaactggagactagcgcttataattatagctgtgtcgccattgttgattgggcaagga
atactccaaacaaaatttcttaaagggtttagtgccgatgccaaggttatgtatgaagaa
gcaagtcaagtggcaaatgatgcaattggtagcattcgaactgttgcatcattttgttct
gaaaagaaggtgatggatacgtatgagaagaagtgtgaaggtccaatgaaacaaggagta
cgactgggagtagtaagtggtacaggttttggcgcttcatttgtagtaatgttcttcaca
aatgcattaattttctatgttggagctcatcttgtgaaaaatgggcaagccacatttgaa
caagtattcagggtgttctttgctctaactatttcagctgtgggggtttcacaatctact
ggcatggctcctgactccaataaagccaaggactcagcagcttcaatatttcaaattctt
gatagcaagccgaagatcgattcaagcagtgatgatggcatgacactaccgagcattact
ggagaaattgatcttgaccatgtcagcttcaaataccccacaagaccagatgtgcagata
ttcagggacatttgtttgaaaatcccttctggaaagactgttgctttggttggagagagt
ggcagtgggaaatcgacagtaataggacttatagagcgtttctatgaccccgatacaggt
agcgtactgttagacggagtggaaatccacaagttcaagctaaactggttgaggcaacag
attggtttggttggtcaagaacctattctctttaatgagtcaattcgtaccaacattgcc
tatggcaagctgggagatgcaaccgaagaagagatcatagcagcaacaactgcatcaaat
gcgcacaatttcatatcttcattgcctcaaggatatgacacctcagtgggggaacgaggt
gttcagttatcaggcgggcaaaagcaaagaatagccattgcaagggctatactaaaggac
ccaaaaatccttttgcttgacgaagctaccagtgcactggacgcagaatcagaacgtata
gtacaagatgctttggacagagttatggtgaataggacaactgttgttgttgctcaccgc
ctcaccacgatcaaaggagcagatataatcgctgtggtgaagaatggtgtgattgctgag
aagggaagccatgattatctgatgaggatcactgatggggcttatgcatctttggtggca
cttcacgctagtgcagcatga
DBGET
integrated database retrieval system
