Rosa chinensis (China rose): 112168016
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Entry
112168016 CDS
T06020
Name
(RefSeq) kinetochore protein NDC80 homolog
KO
K11547
kinetochore protein NDC80
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rcn03036
]
112168016
Chromosome and associated proteins [BR:
rcn03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Kinetochore proteins
KMN network proteins
NDC80 complex
112168016
NMS complex
112168016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc80_HEC
DUF5595
DUF4094
SHE3
MAD
ApoO
V_ATPase_I
ATG17_like
Fib_alpha
DUF4407
MitMem_reg
NPV_P10
CCDC93_CC
CCDC93_N
Tropomyosin
Motif
Other DBs
NCBI-GeneID:
112168016
NCBI-ProteinID:
XP_024160897
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All DBs
Position
5:42095308..42100762
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AA seq
591 aa
AA seq
DB search
MRGSRRPKPSMNPRPPPPSTPLEHFRHRDSDASFASSRPSSIGIGGGPGGSIANVDLYKD
RSYQQSALSAINSYLSSHSVQVFLKFPIPPAREITEALKFLVARLDWPSPKLEDDLPVIL
KSLKCPFKLNKSMIRNPTVNSHQWPNLLAVIHWLFQLVRYNDHLEQNSEAFLDNNPVGQY
TLQSYLHYIRGQDDEAEEVDREFVGKFERQRDESEEQLKVLQQHATELEAEVEALRSEPS
PKEALEREKSMLEEDVSKFHEMIENLDKNVKKLQKVLEEKEKALEAKREEKKRILQENEE
LKKRVESQSFNERDVERMKRELQAVERDIGEAELARNVWEEKVWELDNTLSPKVKELEAL
AMECNQVMRRLKLCNGFQYVLNPKGSTPAEVMGVDYKSTLKPALDSYSQKIKKDSVETLD
GLILLQHQSSALSADIEEKRNDISTLQSRLDEVEAQLNSLRKETQDYTHRCEEEARNMMD
EVKKEAHDMNIVEREAAEILKTSKLKLQEVTKQTEEETQRCACELVAIIDSVSKYKEHVQ
SKIEEMNRDVSDTAAMLSDIHKGSLQYQYSFPFDSSQRSESTEASKVYQLQ
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgagaggcagtcggcgacccaagccgtcgatgaacccacggccaccgccaccatcaacg
ccgctcgagcacttccgccaccgcgactccgacgcaagcttcgcaagcagccgcccctcc
tcgatcggaatcggcggcggtcccggcggctccatcgcaaacgtcgacctatacaaagac
cgctcctaccagcaatccgcgctctccgccatcaattcctacctttcctctcactccgtc
caagtcttcctcaaattcccgatccctcccgccagagagatcaccgaagccctgaaattc
ctcgtcgcccggctcgattggccgtcgccgaagctcgaagacgaccttccggtgattctg
aaatccctgaaatgccctttcaagctcaacaagtccatgattcgaaaccctacggtgaat
tcgcaccagtggccgaatctgctcgctgtgattcactggctgttccagcttgttcgttat
aacgatcacctggagcagaattcggaggcgtttctggacaacaaccctgtgggtcagtac
acgttgcagagctacttgcattatataaggggccaagatgatgaagctgaggaggtggat
cgtgagtttgtggggaagttcgagaggcagagggacgaatcggaggagcaattgaaggtt
ctgcagcagcatgcgacggagctggaggcggaagtggaggccttgaggtcggagccgtcg
cctaaggaggcattggagagggagaagagtatgctggaagaggatgtgagcaagttccat
gagatgattgagaatctcgacaagaatgtgaagaaactgcagaaagttttggaggagaaa
gagaaggcattggaggccaagagggaagagaagaagaggattttacaggagaatgaggag
ctgaagaagagagtcgaatcgcagagttttaatgagagggatgtggagagaatgaagagg
gaattgcaggctgtggagagggacattggggaagccgagctggctaggaatgtgtgggag
gagaaggtttgggaattggataacacgctcagcccaaaggttaaggagttggaggctttg
gcaatggagtgcaaccaagtcatgaggaggttgaaactttgtaatggctttcagtatgta
ttgaatcctaagggatcaacacctgctgaggtgatgggagttgactataaatcaacttta
aagcctgcacttgactcatactctcaaaaaataaagaaggattctgtggaaacactggat
gggttgattttgcttcagcatcagtcgagtgcactttctgctgatattgaggaaaaaaga
aatgatatatcaacacttcagtcgcgtcttgatgaagtggaagctcaattgaattcatta
aggaaagagacacaggactatactcatagatgtgaagaagaagctagaaatatgatggat
gaagttaaaaaggaggctcatgacatgaatattgtggaaagagaagcagctgagattctg
aagacttccaaattgaaattgcaggaagtaactaaacaaactgaagaagagactcagagg
tgtgcttgcgaactcgttgccataattgactcggtctcaaaatacaaagaacatgtgcag
tcaaagattgaagaaatgaatagagatgtctccgatactgcagctatgttatcagatatt
cacaaaggttcgttgcaataccagtacagttttccgtttgattcaagccaacgctctgaa
tcaactgaagccagcaaggtctatcagcttcagtag
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