Rosa chinensis (China rose): 112170473
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Entry
112170473 CDS
T06020
Name
(RefSeq) ubiquitin domain-containing protein DSK2a isoform X1
KO
K04523
ubiquilin
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112170473
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcn04131
]
112170473
03051 Proteasome [BR:
rcn03051
]
112170473
Membrane trafficking [BR:
rcn04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
112170473
Proteasome [BR:
rcn03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
112170473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
XPC-binding
Rad60-SLD_2
Ubiquitin_2
Dsc3_N
CSTF2_hinge
Motif
Other DBs
NCBI-GeneID:
112170473
NCBI-ProteinID:
XP_024163547
LinkDB
All DBs
Position
6:44057433..44061597
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AA seq
575 aa
AA seq
DB search
MGVEGDSSEPKVGGGEGGELINIRCSNGSKFSVRAALDIDVGAFKAILAQNCNIPADQQR
LIYKGRILKDDQTLTSYGLQADHTVHMVRAFAPGASTTPATPAAKATSASPNTAAAAGVT
RGVGSEGVESPDLGASLLFGQGLGGLGTGGAPGGLFGSGLPEFEQVQQQLTQNPNMMRDI
MNTPAIQSLMNNPELMRGLIMNNPQMRDIIDRNPELAHILNDPGILRQTLEAARNPELMR
EMMRNTDRAMSNIESSPEGFNMLRRMYENVQEPFLNATTMTGNAGNDAAANPFAALLGNQ
GGAQARDGTNNPSTTGSETTAGSAIPNANPLPNPWSNTTGGNQTNAPRSTPAGDGRAPSI
GGLGGLGGLGGLGGLGGLPGMEQMMGGMPDANAMNQLMQSPAISQMMQSILSNPQYMNQI
LNLNPQLRAMVDLNPQLREMMQNPELLRQLTNPELLRQLTNPETMQQMLALQQSLVSQTN
RQQSTQDPTQTGGATGTPNNGAGLEMLMNMFGGLGAGSLAAPVSNVPPEERFATQLSQLQ
EMGFFDTQENIRALQATSGNVHAAVERLLGNPPGA
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgggggttgagggcgattcaagcgagcctaaagtaggtggtggagaaggcggagagctg
attaatattcggtgctctaatgggtccaagttttcggtcagggcggctttggatatcgat
gttggggcattcaaggcgattttggctcagaattgtaatattccagctgatcagcaaagg
ttgatttacaaaggtcggattttgaaggacgaccagaccctcacaagttatggtttgcag
gcagatcatactgtccacatggttcgtgcctttgctcctggtgcctcaacaacaccagct
actcccgccgctaaggctacttctgcaagtcccaacactgcagctgcagctggtgttact
cgtggtgttggttccgagggggttgagagtcccgaccttggggcatctttgctatttggg
cagggtttgggtggtcttggtactggtggagcacctggtggtttatttgggagtgggctt
ccggaatttgaacaagtgcagcagcaactaactcagaacccgaacatgatgagggatata
atgaatacgcctgccattcagagtcttatgaataaccctgagttgatgcgaggcttgatc
atgaacaatccacaaatgcgtgacatcattgaccggaacccagagcttgcacatatactt
aatgatcctggtattcttagacagacactagaagctgcaaggaaccctgaactcatgcgt
gagatgatgcgaaacactgacagggcaatgagtaatattgaatcttcgcctgaggggttc
aacatgctgcgacgaatgtatgaaaatgttcaggagccatttttgaacgctaccacaatg
actgggaatgctgggaatgatgcggctgcaaacccctttgctgctcttttagggaatcag
ggtggggcacaggccagggatgggactaacaacccttcaaccaccggttcagaaactact
gcaggttctgctattcctaatgcaaaccctcttcccaacccttggagcaatactactgga
ggaaatcaaacaaacgcacccaggtcaactcctgctggggatgggagggcaccaagtatt
ggcggtcttggaggtctgggaggtctaggaggtctgggaggtcttggtggtcttccagga
atggaacaaatgatgggtggcatgccagatgctaatgcaatgaatcagctcatgcagagt
ccagcaatatcacagatgatgcaaagcatactctctaatccccaatatatgaatcagatc
ctgaacctcaatccacaactacgcgccatggttgatttaaaccctcaacttagagaaatg
atgcaaaatccagagcttctacgtcagttgacaaaccctgagcttctacgtcagttaaca
aaccctgagacaatgcagcaaatgcttgcattgcagcaatcactagtttctcagaccaat
cgacagcaatcaactcaggatccaactcagactggtggtgctacaggaacccccaataat
ggtgctggactggagatgctgatgaacatgtttggtggtcttggagctggtagcttggct
gcaccagtcagcaatgtaccaccggaggaacgttttgcaactcagctgtcacaacttcaa
gaaatgggtttcttcgatactcaagagaatatcagggcattgcaagccacttccgggaat
gtccatgctgcagtagagcgacttttagggaacccaccaggagcataa
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