Rosa chinensis (China rose): 112172644
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Entry
112172644 CDS
T06020
Name
(RefSeq) methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial isoform X1
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00280
Valine, leucine and isoleucine degradation
rcn01100
Metabolic pathways
Module
rcn_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
112172644
Enzymes [BR:
rcn01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
112172644
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Gene cluster
GFIT
Motif
Pfam:
MCCA_BT
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
Biotin_lipoyl_2
ATP-grasp
ATPgrasp_ST
HlyD_3
HlyD_D23
ATP-grasp_4
ATP-grasp_3
ATPgrasp_TupA
Motif
Other DBs
NCBI-GeneID:
112172644
NCBI-ProteinID:
XP_024165829
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Position
6:53397134..53408522
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AA seq
794 aa
AA seq
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MASVATVLRRKLSGKPFHFRLLPVRPFSDSPQRIEKILIANRGEIACRIMRTAKRLGIQT
VAVFSDADRHSLHVKSADEAVRIGPAPARLSYLDASSILDAAVRTGAQAIHPGYGFLSES
SDFAQLCEDKGLTFIGPPASAIRDMGDKSASKRIMGAAGVPLVPGYHGKDQDIDLMKIEA
DKIGYPILIKPTHGGGGKGMRIVQSPDEFVEAFLGAQREAAASFGVNTILLEKYITQPRH
IEVQIFGDKHGNVLHLYERDCSVQRRHQKIIEEAPAPNVSNDFRSHLGQAAVSAAKAVSY
HSAGTVEFIVDTVSGQFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEHLPISQSQ
VPLSGHAFEARIYAENVPKGFLPATGVLHHYQHAPVSPSAVRVETGVEQGDSVSMHYDPM
IAKLVVWGENRAVALVKLKDCLTKFQVAGVPTNISFLSKLANHREFENGNVETHFIEHFK
DDLFVNPSNLEVMNTVLGAARFVAKLAAACLIEKENSVFREILPGSNNTISIWYSSPPFR
VNHCARHTVELEWENEYDSSGSRLLTYSITYKSDGSYLIEMLHLCVQTEEDISPPLEVKA
TCVGDHDFRVEADGVIMDVSLAVYSKDQTKHIHLWHGSHHHHYRQKLGLELSDEDETEHR
PSFDRSSHPPGTVVAPMAGLVVKVLIKDATKVEEGQPILVLEAMKMEHAVKAPSAGYVRG
LHLAAGQQVSDGSVLFSIKAQSLKPDILSAPHCDAIFQNMEISYSDNSVIVYNVYITFDR
FQICRMACWSAGWI
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagtggccaccgtcctccgccggaagctctccggcaagccattccatttccga
ttactaccagtccgaccattctccgactcgccgcagagaatcgagaagattctgatagcc
aaccggggcgaaattgcgtgcaggatcatgaggacagcaaagagactcggaattcaaacc
gtcgccgttttcagcgacgccgatagacactcgctccacgtcaaatccgccgacgaggcc
gttcgtatcggtccggctccggctcggctcagctacctcgacgcctcgtcgattcttgac
gccgccgttcgtactggtgcgcaggctatccatcctggctatggttttctgtcagagagt
tccgactttgctcaactttgtgaggataagggtcttacctttattgggcctccagcatct
gccatcagggacatgggtgataaaagtgcgtcaaagagaataatgggtgcagcaggggta
cctcttgtgcctggatatcatgggaaagaccaagatattgatctaatgaagatagaagcc
gacaagattggatatccaatcttaataaagccaactcatggaggtgggggaaagggtatg
aggattgtgcaaagtccggatgagtttgttgaagccttccttggagcacaacgtgaggct
gctgcttcttttggcgtaaacacaattttgctggagaaatatattacacagccaagacac
atagaagtccagatatttggggataaacacgggaatgttctacatttatatgagagagat
tgcagcgtacaaagaaggcaccagaaaataatcgaagaagccccagctccaaatgtttct
aatgacttccggtctcacttgggtcaagcggctgtatctgctgccaaggcagttagctat
cacagtgccggcacagtggagtttatagtcgatacagtctcaggccaattttatttcatg
gagatgaatacccgtcttcaggttgagcatcctgtgactgagatgattgttggccaagat
cttgtagagtggcaaattcgtgtagcaaatggagaacaccttcccataagtcagtcacag
gtccctttgtcaggtcatgcttttgaagcccgtatatatgctgaaaatgtaccaaaaggg
ttccttcctgcaactggagttcttcatcactatcagcatgctccagtttcaccatcagca
gttcgagttgagactggggttgaacaaggagacagtgttagcatgcattatgatcctatg
attgccaagcttgtagtatggggagaaaatcgtgcagtagcactggtaaaactgaaggat
tgcttgacaaagtttcaggttgcaggtgtaccaaccaacatcagttttctgtcaaaactt
gccaaccatcgggaatttgaaaatgggaatgtggaaactcattttattgaacattttaaa
gatgacctgtttgtcaaccctagtaatttggaagtaatgaacacagtgcttggtgctgct
agatttgttgccaaactggcggctgcatgtctcattgaaaaggaaaattctgtattcaga
gaaattcttcctggaagcaacaacacgatctccatatggtattcttctccgcctttcaga
gtcaatcattgtgctaggcatacagtggaactcgagtgggagaatgaatatgatagcagt
ggctcaaggttattgacctattccatcacttacaaatctgatgggagctatctaattgag
atgctgcatctttgtgtgcagacagaagaagacatttccccacctttggaggttaaagca
acttgtgtaggtgatcatgatttcagagttgaagctgatggtgtaatcatggatgttagc
ttagctgtttactcgaaggatcagaccaagcacattcatctgtggcatgggtcacatcat
catcattatagacaaaaattgggtcttgaattgtctgatgaagatgaaaccgaacatagg
cccagttttgatagatcatctcatcctccgggaacagttgttgcacccatggctggtttg
gtggtcaaggttcttattaaggatgcaacaaaagtggaggaaggacaacctattttagta
ttagaggcaatgaagatggagcatgctgtaaaggcaccatcagcaggctatgtccgcggg
cttcatctagcagctggacagcaggtttctgatggcagtgttctcttcagtattaaggct
caatcactcaaaccggatatattgtcggcaccacactgtgacgctatttttcaaaacatg
gaaatctcatactcggacaactccgtcattgtttacaatgtttatatcactttcgaccgg
ttccaaatctgcaggatggcttgttggagtgcgggatggatctaa
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