Rosa chinensis (China rose): 112173385
Help
Entry
112173385 CDS
T06020
Name
(RefSeq) endo-1,4-beta-xylanase 5 isoform X1
Organism
rcn
Rosa chinensis (China rose)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_10
Glyco_hydro_cc
CBM_4_9
Motif
Other DBs
NCBI-GeneID:
112173385
NCBI-ProteinID:
XP_024166760
LinkDB
All DBs
Position
6:140095..143333
Genome browser
AA seq
555 aa
AA seq
DB search
MGSTTLTFVRLQLLMFILLLGSPFVFSFDGPLYDSTAYTECKRQPEKPLYGGGIIVDEPS
AVADIDNGDVYSPAFLLQNLTGNGTIYSFSSWVKIGGAGSALIQASLKAEDESYNCIGTV
LAKRGCWSFLKGGFVLNSPPNFSILFFQNTDGRDVGLAIASASLQPFSVQQWNTYHQYMI
NSKRKRAVTVHVSNGQGKGLQGAAITVEQVSKDFPFGSAISKTILGNLPYQNWFVERFNA
AVFENELKWYATEPNQGNVTYTIADQMLQFVRAHQITARGHNIFWEDPKYTPPWVRYLTA
DQLQSAVNSRIQSLMSKYKEEFIHWDVSNEMLHFDFYEKQLGPNATLDFFQTAHKSDPLA
TLFMNDFNVVETCTDVNSTVDTYVSRLRELQQGGVSMDGIGLEGHFTIPNPPLMRAIIDK
LATLGLPIWLTEVDISNTLDKETQAIFLEQVLREGFSHPSVNGIMLWSALHPNGCYEMCL
TDNNLKNLPAGDVVDKLLKEWQTGKIEAQIDEHGSHSFFGFLGEYRVSVKYGNRTANSTF
SLCEGEETRHVSIQL
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcactactctcaccttcgtcaggctgcagcttctgatgttcattctcctcctg
ggctcaccctttgttttttcctttgatggtccactatatgactctactgcttacactgag
tgtaaaaggcagccagagaagcctctatatggtggagggatcattgttgatgagccttca
gctgttgcagacatagacaatggggacgtttattcaccggcattcctactccaaaatctc
accggcaacggcaccatttacagcttctccagttgggtgaagatagggggtgcaggttca
gcactgatacaggcaagtctaaaggcagaagatgaatcatacaattgtataggaactgtt
ttggccaagcggggatgctggtcattcctcaagggtggctttgtcctaaattcaccacct
aatttctctatactattcttccagaatacggatggcagggatgtcggcctagcaattgca
agtgcttctttgcagccatttagtgttcagcaatggaatacatatcaccaatatatgatc
aacagtaaaaggaagcgtgccgtgacggtccatgtctcaaatggacaaggaaaggggctg
caaggagctgcaattaccgtagagcaagtctccaaagatttcccatttggatctgcaatt
tcaaagaccattctaggcaatttaccctaccagaattggtttgttgagagattcaatgct
gcggtgttcgagaatgaactcaagtggtacgcaacagaacctaatcaaggcaatgtcact
tacactatagcagatcaaatgttgcaatttgttcgagctcaccaaatcactgctagaggg
cacaatatattctgggaagatcccaaatacacaccaccttgggttcgatacctcacagct
gatcagctacaatcagctgtcaactctcggatacaaagcctaatgagcaaatacaaagaa
gagttcattcattgggatgtcagcaatgaaatgcttcactttgatttctatgagaaacaa
cttggccccaatgccaccttggatttctttcagacggcacacaaatctgatcctttggca
accctttttatgaatgactttaatgtggtggagacttgcactgatgtgaattccacagtt
gatacctatgtttcaaggctgagagaacttcaacaaggtggagtatcaatggatgggatt
ggactagagggtcattttacaataccaaacccccctctaatgagagctattatagataag
ttggctaccctaggccttcctatttggctcacagaggttgatatcagcaatactctggac
aaagaaacacaggccatttttctagagcaagtattaagagaaggtttctcacatccatct
gtaaatgggataatgctctggagtgctctacatcctaacgggtgctacgagatgtgcctg
acggataataaccttaaaaatctaccagctggtgatgtggtggacaagctcttgaaagaa
tggcaaaccgggaagatagaggctcagatcgatgagcatggatcacatagctttttcggg
ttcttgggtgagtacagggttagtgtgaagtatggaaataggaccgcaaactcaacattc
tcactgtgtgaaggggaagaaactagacatgttagcattcaactgtaa
DBGET
integrated database retrieval system
