Rosa chinensis (China rose): 112174532
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Entry
112174532 CDS
T06020
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03013
Nucleocytoplasmic transport
rcn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112174532
09122 Translation
03013 Nucleocytoplasmic transport
112174532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112174532
03041 Spliceosome [BR:
rcn03041
]
112174532
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
112174532
Spliceosome [BR:
rcn03041
]
Complex C
Other components
EJC/TREX
112174532
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
112174532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Herpes_UL92
Motif
Other DBs
NCBI-GeneID:
112174532
NCBI-ProteinID:
XP_024168089
LinkDB
All DBs
Position
1:15804301..15813772
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AA seq
612 aa
AA seq
DB search
MEVFRTAILQPGPPETFALQTVQQVIKPQKGTKLVQDENQLLENILRTLLQELVSSAVQS
GEQIMQYGQSIDDGESTRGHIPRLLDVVLYLCEKEHVEGGMIFQLLEDLTEMSTMRNCKD
VFGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSE
RSAVNIKGVFNTSNETKYEKDAPDGISIDFNFYKTFWSLQEHFCNPPSLTVAPTKWQKFT
SSLMVVLNTFEAQPLSDEEGDANNLEESANFSIKYLTSSKLMGLELKDPSFRRHILVQCL
ILFDYLKAPGKSEKDLPSESMKEEINSYEQHVKKLLKMTPPKGESFLNKIEHILEREKNW
VWWKRDGCPPFEKQPIEKKTVQDGAKKRKPRWRLGNKELSQLWKWADQNPNALTDPQRLQ
TPAITEYWKPLAEDMDPAAGIEAEYHHKNNRVYCWKGLRFSARQDLEGFSKFTEYGIEGV
VPLELLPPEERAKYTPKPNDRSKRARKEDTKGAAHQVEENQMATAATEVDGEGLRTDVGA
FVAPLDTDNTATVGNTSQGSSPMADEHQKQSSDTDGGQEAGQLEDDAEVDAEGDAGMIDG
EMEPEVDLDAVS
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgttcagaactgcgatactgcaaccaggccctcctgaaacctttgcattacag
acggttcaacaagttataaagcctcagaaagggaccaagttagtgcaagatgagaatcaa
ctgttggaaaatatcctccggacattgctacaggaactagtgtcttctgcagtgcagtct
ggggagcagataatgcagtatggtcaatcaattgatgatggagaatctacaagaggacat
attccacgtcttctagatgttgtgctgtatctttgtgagaaagagcacgtggaaggtggc
atgatatttcagctattggaagacttgacagagatgtctacgatgagaaactgcaaagac
gttttcggttatatagagagtaagcaggatatattaggaaagcaagagctttttgccaga
ggaaaacttgtgatgttgagaacatgcaatcaacttcttcgtcgtctatcaaaggcaaat
gacgtggttttttgtggacgaattctaatgtttctagcacactttttcccattgtctgag
cgctcagctgtgaatatcaaaggagtttttaacacatctaatgaaacgaagtatgagaaa
gatgcccctgatggaatatccattgatttcaacttctacaagaccttctggagcttacag
gaacacttttgtaaccctccttccttaactgttgctcctacaaagtggcagaaatttaca
tccagtttaatggttgtcctaaatacctttgaagctcaaccattaagtgatgaagaggga
gatgccaataatttggaggagtcagcaaatttcagcataaagtatcttacaagtagtaag
ctgatgggtttggagttaaaggatccgagtttccgacgacacattcttgtgcagtgcctc
atattgttcgattatctgaaggccccaggaaaaagtgaaaaagatttgccttctgaaagc
atgaaagaagaaataaattcttatgagcagcatgtgaagaaactgcttaaaatgactcca
ccaaagggggaaagttttcttaataaaattgagcatatattagaacgtgaaaagaattgg
gtatggtggaaacgtgatggttgcccgccatttgagaagcagccaatagagaagaaaacg
gttcaagatggagccaaaaagcgaaagccgaggtggagattgggaaataaagaactctcc
cagttgtggaagtgggcagatcagaatccgaatgctttaactgatcctcaacgtcttcag
acccctgccatcactgagtattggaaacccttggctgaggacatggatccagcagctgga
atagaagctgaatatcaccacaaaaataaccgagtttactgctggaaaggtcttcgattt
tcagctagacaagacttggaaggattttctaaatttactgaatatggtattgaaggagtg
gtacctctagaacttctgcctcctgaagaacgtgctaaatacactcctaaaccaaatgac
aggtccaaacgcgctagaaaggaagatacaaagggtgctgcgcatcaagtagaagaaaat
cagatggcaacagctgcaaccgaggtagatggtgaaggactcagaactgatgttggggcc
tttgtggctccattggacactgataacaccgccacggttggcaatacgtcccaaggtagc
agtccaatggcagatgaacatcagaagcaaagttctgatactgatggtggtcaagaggca
gggcagttggaagacgatgctgaggtggatgccgagggggatgccgggatgattgatgga
gagatggaaccggaggttgatttagatgcagttagctga
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