KEGG   Rosa chinensis (China rose): 112179080
Entry
112179080         CDS       T06020                                 
Name
(RefSeq) cyclin-dependent kinase D-3
  KO
K02202  cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn03022  Basal transcription factors
rcn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    112179080
  09124 Replication and repair
   03420 Nucleotide excision repair
    112179080
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:rcn01001]
    112179080
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rcn03021]
    112179080
   03019 Messenger RNA biogenesis [BR:rcn03019]
    112179080
   03400 DNA repair and recombination proteins [BR:rcn03400]
    112179080
Enzymes [BR:rcn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     112179080
    2.7.11.23  [RNA-polymerase]-subunit kinase
     112179080
Protein kinases [BR:rcn01001]
 Serine/threonine kinases: CMGC group
  CDK family
   112179080
Transcription machinery [BR:rcn03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     112179080
Messenger RNA biogenesis [BR:rcn03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Capping factors
     112179080
DNA repair and recombination proteins [BR:rcn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     112179080
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr ABC1 Haspin_kinase Seadorna_VP7
Other DBs
NCBI-GeneID: 112179080
NCBI-ProteinID: XP_024173166
LinkDB
Position
7:1506572..1511085
AA seq 418 aa
MGEVDSSKKVADRYLKREVLGEGTYGVVYKAIDTHTGQTVAIKKIRVGKQKEGVNVTALR
EIKLLKELKDPNIIELIDAFPHKGNLHLVFEFMETDLEAVIRNHNIVLSPADIKSYIQMT
LKGLAFCHKKWVLHRDMKPNNLLIGPNGQLKLADFGLARVFGSPDRRFTHQVFARWYRAP
ELLFGTKQYGPGVDVWAAACIFAELLLRQPFLQGTSDIDQLGKIFAAFGTPTPSQWPDMV
YLPDYVEYQYAPPSALRKRFAMASDDAFDLLSKMFTYDPKARISVQQALEHRYFTSAPLP
TDPDKLPRPAPKKESSNSKASDFNPNEGPTVLSPPRKSRRVMPERVSFEGNAPQSDKVDD
HVGDIRQAAGESTSRNEPVPMSVDFSIFGAKPPNRPTINSADRTHLKRKLELDFQQPE
NT seq 1257 nt   +upstreamnt  +downstreamnt
atgggcgaggtcgattcatcgaagaaagttgcagataggtatctgaagcgcgaggtcctc
ggtgaaggtacttatggagtcgtctacaaagccattgatactcatacaggacagacagtt
gctatcaagaagattcgggttgggaagcaaaaggaaggggtgaatgttacagcgcttaga
gagattaaactgctaaaggagctgaaagatccgaatattattgagttgattgatgcgttc
ccccataaaggaaacctgcatcttgtgtttgagttcatggagacggaccttgaagctgtt
atacgtaaccataatatagtcctttcaccagcggatataaagtcgtacattcagatgacg
ctaaaaggacttgctttttgtcacaagaaatgggttttgcacagggatatgaagcccaac
aacttgttgataggacctaatggacagcttaaacttgcagattttggtttagcacgagta
tttgggagtccagatcgcaggttcactcatcaggtctttgctcgatggtatagagcacct
gagctattatttggcaccaaacaatatggacctggggtggatgtttgggctgcagcttgt
atattcgctgagcttctcctacgacaaccatttctgcagggaacaagtgatattgatcaa
ctaggaaagatttttgcggcttttgggactccaacaccttctcaatggcctgatatggta
taccttcctgattatgtggaataccagtatgctccaccatctgctttgcgtaaaaggttt
gcgatggctagtgatgatgccttcgatttgctatcaaagatgtttacttatgacccaaaa
gctagaatatctgtgcaacaggcactagagcacaggtacttcacatctgctccactacct
acagatccagataagcttccgaggcctgctccaaagaaggagtccagcaattctaaggct
tcagatttcaatccaaatgagggtcctactgttttgtcacctccaagaaagtcaaggaga
gtgatgccagaacgtgtgagttttgaaggaaatgcaccccaatcggataaggttgatgat
catgtcggagacatccgacaggctgctggtgaaagtacaagcaggaatgaaccagtgcca
atgtcagtagatttttccatctttggagcaaaacctccgaataggcctacaataaatagt
gctgacagaacacatctaaaaaggaaactagagcttgacttccaacagcccgaataa

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