Rosa chinensis (China rose): 112179648
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Entry
112179648 CDS
T06020
Name
(RefSeq) cyclic nucleotide-gated ion channel 1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
112179648
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rcn04040
]
112179648
Ion channels [BR:
rcn04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
112179648
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
112179648
NCBI-ProteinID:
XP_040368995
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Position
1:12308854..12313395
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AA seq
634 aa
AA seq
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MYKQRVPVENDDTYMMSTTRGTNYDFESVEEQGRDGSSKTVDALSTKKKLKIALLSVSLW
NKLFLIACVIAVSLDPLFFYIPIINEDEKCLGIDKELRTIALILRSLSDIIFIVHIVYQI
CEATMAAYKVHIKGKSELELDWSYSKISMGEIIPFAKLVAGKLAWRSTLTDILAVLPIPQ
FLVVFGFFKMRGRGYLERKKILNVFLLGQYLPRIYRIYLSSKELRQTTGIWVKALFNFFL
YILASHVIGAFWYFFSIQRETSCWHHACIKNSTNVEGCMSTFYCDGHNTTARNVTFFNQF
CHINVEDNATALFDFGIFLNSLKNGNTGHIHFATKLSYSFWWGLRNLSNFGTSLETSTYV
WESCFAVFICVIGLLLFLYLIGNVQTFMSMEAQRWEVIRNKMLLKEKDIERWMDRNELPD
DMKKEIKKNITQKLEENKDSDLENLFNILPWYTKKYLKRVLCMDILKKVPKLERMDEKVL
KMICDYLKPEMYAEGAMVFHMGEPLDSMLFITEGTILTYKTTGTDNHAHENAKLGPPASP
SIGTLEKGYFYGEQLLHWASQKNVNLTEVPSSADNVKCHTKVEGFVLMAKDLRTVVSKCE
YWWKLSISTPRVGGTRTTPNARNVQQKPGVDPQY
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgtataagcagcgtgtccccgttgagaacgatgatacctatatgatgagcacaacacga
ggtacgaactatgatttcgaaagtgttgaggagcaagggcgagatggttcatcgaaaact
gtagatgcactttcaaccaagaaaaaattgaaaattgcacttctttccgtttcattgtgg
aacaagctattcctaatcgcatgtgtgattgcagtctcattagaccccttgttcttttac
attccaatcatcaatgaagatgaaaagtgtcttggaatagacaaagagttgaggaccata
gctctcattttgcgatccctcagtgatatcattttcatagtgcatattgtgtatcaaatt
tgcgaagctactatggcggcctacaaagtacacataaaaggaaagtcggaattggaattg
gattggtcatattcgaagatatcaatgggtgagataattccatttgctaaattagttgct
gggaagctagcatggcgctccacgctaactgatattttggctgttcttcccataccacaa
tttctagtggtctttggtttcttcaaaatgagaggccgtggatatttggaacgcaagaag
attctcaatgtctttctcctgggtcaatatttgccaaggatttatcgaatttacttgtca
tctaaggaacttagacaaactacaggaatttgggttaaggctctgttcaacttttttctg
tatatactagccagtcatgtcattggagccttttggtacttcttttctattcaacgtgag
acatcatgctggcatcatgcttgtataaagaatagtacaaatgtcgaaggatgtatgagt
actttttactgtgatggtcacaatactaccgctagaaatgtcacttttttcaatcagttt
tgccacatcaatgttgaagacaatgctacagcgctttttgattttggaatatttcttaat
tctctcaagaatggtaacacgggccatatacattttgcaacaaagttgtcctactcattt
tggtggggattgcggaatctgagcaattttggcacgagtctcgaaacaagtacctatgtg
tgggaaagttgctttgcagtatttatttgtgtcattggcttgctactgtttctatatctg
attggaaatgttcagacctttatgtccatggaagctcaaagatgggaggttataagaaac
aagatgcttttgaaagagaaagatatagaaagatggatggacaggaatgaattgcccgat
gatatgaagaaagaaatcaagaaaaacataacgcaaaaattggaagaaaacaaagattca
gatctggagaaccttttcaatattcttccctggtacaccaaaaagtacctaaagcgagtt
ctctgcatggacatactaaagaaagtacctaaactggaaagaatggatgagaaagtgttg
aaaatgatctgcgactatctaaagccagagatgtatgctgagggcgccatggtttttcac
atgggagaaccgcttgatagcatgctattcattacagaaggcactatactgacctacaaa
actaccggtactgataatcatgctcatgaaaacgcaaaattgggtcctcctgcatcccca
tcaatcggcacccttgagaaaggctacttctatggcgaacaactgctgcactgggcatca
caaaaaaacgtgaatttaacggaggtccctagctctgccgacaatgtgaagtgccataca
aaagtagaaggctttgttctcatggccaaggacttaagaactgtagtctccaaatgtgag
tactggtggaaattaagcattagtactcctagagtgggtggtactcggaccacaccaaat
gctaggaatgtgcagcagaaacctggagtggatccgcagtactag
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