Rosa chinensis (China rose): 112182790
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Entry
112182790 CDS
T06020
Name
(RefSeq) pumilio homolog 1 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
rcn
Rosa chinensis (China rose)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NABP
PUF
DUF445
DNA_pol3_alpha
Motif
Other DBs
NCBI-GeneID:
112182790
NCBI-ProteinID:
XP_024177102
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All DBs
Position
1:58272954..58280218
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AA seq
1030 aa
AA seq
DB search
MVTDTYSKMMSEMSMRSMLKNNGDYSEDLSLLIRQQRQEVSEREKELNPYRSGSAPPTVE
GSLNAVGGLFDAVNGFASEEELRADPAYHSYYYANVNLNPRLPPPLRSKEDWRFAQRGGA
GGGSGVGGIGDRRKGGRGGSGEGSLFSVQPENGAAARNGEWGGDGLIGLPGLGLGSRQKS
IAEILQDDIQNTTGSRHPSRPASRNAFDDGVETSDTQYAQMHRDLASLDALRSGGNKQGM
SAAQNFGSSGSHTYASALGGSLSRSTTPDPQLVSRAPSPRIPPVGGGRAPSTDKNSVGGQ
NSYNGIASNVKESADLVAALSGMNLSKNSRMHEENHAHSQIQGDNHFDMQGDRNHIKQNS
YMNKPDSGNYHLHSVSQSTKNSYQNMAKGSGFGRDQNNPSLMSDGLAEINNPAVSSANSY
LRGPSAPALNGRGSSVSHYQSVDGMNSSFANYGLAGYSVSPSSPSMMGSPLGNGNLPPLF
ENAAAVSAMGGLDSGAFGGGMSLGPNLLAAAAELQNMGRGGNHAAGGALQMPLMDPLYLQ
YLRSNEYAAAAQLASLHDPTADREGMYVDFLGLQKAYLGQLLSPQKSQFGAPYMGKSGSL
NHGYYGNPAFGLGMSYSASPLLPNSPVGPGSPVRHSDRNLRFSSGMRNMSGGLMGAWHSE
TGGNFDESFASSLLDEFKSNKTKCFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKN
MVFDEIMPQALSLMTDVFGNYVIQKFFEHGSAAQIRELADQLTGHVLTLSLQMYGCRVIQ
KAIEVVDLDQQTQMVTELDGHIMRCVRDQNGNHVIQKCIECIPEDAIQFVVSTFYDQVVT
LSTHPYGCRVIQRILEHCHDPKTQQIMMDEILHAVCTLAQDQYGNYVVQHVLEHGKPDER
SDIIRKLTGQIVQMSQQKFASNVIEKCLTFGTLAERQALVTEMLGTTDENEPLQAMMKDQ
FANYVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAGEKRISILT
PQCPPATATA
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggttactgatacgtattcgaagatgatgtccgagatgtcaatgcgatccatgcttaag
aacaacggcgattacagtgaagatttgagccttctgattcgtcagcagaggcaagaagtg
agcgagcgagagaaggagctcaatccatacagaagtgggtcggccccaccaaccgtagaa
gggtcgctgaacgccgtcggcggtcttttcgacgccgttaacggctttgcgagcgaggag
gagctaagggctgatccggcttatcatagctactactacgccaatgtcaatctcaatccg
cggctaccgccgccgctgaggtccaaggaggactggcggtttgcgcagcggggcggcgcc
ggaggaggttctggggtcggaggcattggggataggaggaaaggcgggaggggtggtagt
ggtgaagggtcacttttttcggtgcagccggagaatggggcggcggcgaggaatggagag
tggggcggagatgggctgattgggttgcccgggttgggccttgggagtaggcagaagagt
attgccgagattcttcaggatgatatacagaatacaactggctcaaggcacccttctcgt
ccagctagccggaatgcatttgatgatggtgttgaaacttcagatacccagtatgctcag
atgcatcgtgatttggcatctttagatgctttgcgctctggtggaaataagcagggtatg
tctgctgcccagaactttggttcctcgggctctcatacttatgcttctgctctaggtggc
tcactgtcaagaagcaccacaccagatcctcagcttgtatctagggctcctagtccccgg
attccaccagttggaggaggaagagctccttccactgataaaaatagtgtcggtggtcaa
aattcatataatggtatcgcatccaatgtgaaagagtctgcagatctggtagctgcctta
tctggtatgaacctgtcaaaaaacagtaggatgcatgaagagaatcatgcacattcacag
attcaaggtgataaccactttgatatgcaaggggatcggaaccatattaaacaaaattca
tatatgaacaagcctgattcagggaattatcatttgcattctgtttcccagtctaccaaa
aactcttatcagaatatggccaaaggcagtggatttgggagggaccagaacaacccttca
ctgatgtctgatgggctagctgaaattaacaatcctgctgtatcttctgctaactcatac
ttgagaggaccctctgccccagctcttaatggccgaggaagctcagtctctcactatcag
agtgtagacggtatgaattcctcatttgcaaactatgggttagctgggtattctgttagt
ccatcgtcaccctccatgatggggagcccactgggtaatggtaatttaccacccttgttt
gaaaatgctgctgctgtttctgcaatgggtggcttggactctggagcctttggaggaggt
atgtctctgggaccaaatttgttagcagcagctgctgaattgcagaatatggggaggggt
ggaaatcatgctgccggaggggctcttcagatgcccctgatggaccccttgtatctgcag
tatttaagatcaaatgagtatgctgctgctgcacagcttgcatcccttcatgaccccaca
gcagacagggaaggcatgtatgtggactttctggggttgcaaaaagcttatctgggacaa
ttactttcgcctcaaaaatcacagtttggtgctccctacatgggtaagtctggtagcttg
aatcatggttattatggaaatccagcatttgggcttggcatgtcttattctgcaagtccc
cttcttccaaactctcccgttggaccaggtagtcctgtcagacacagtgacaggaacttg
cgtttttcttcggggatgaggaacatgagtggaggtctcatgggagcttggcactctgaa
actggtggaaatttcgatgaaagttttgcatcctctttgctagatgagttcaagagcaat
aagactaaatgttttgaactttcagaaatttcaggccatgttgttgagttcagtgcggac
cagtatgggagtaggttcattcaacagaaacttgaaactgccacaaccgaagaaaagaac
atggtttttgatgaaattatgccccaagccctttctttgatgactgatgtgtttggtaat
tatgtgattcagaagtttttcgagcacggttctgcagcacaaattagagaactggctgac
cagctcactgggcatgtgctgacccttagccttcaaatgtatggctgtcgagtgatccag
aaggctatagaagttgttgatctggaccagcagactcaaatggtcacagaactggatggt
cacattatgcgttgtgttcgtgatcaaaatgggaaccatgtcatccagaagtgtattgaa
tgtatacctgaagatgctatccagtttgttgtttcaaccttttatgatcaagttgtgaca
ctgtcaactcatccatatggttgtcgtgtcatacagagaattttggagcactgccatgat
cccaaaacgcagcagataatgatggatgagattttgcatgctgtttgcactttggcacaa
gatcagtatggaaattatgttgtgcagcatgtgctggagcatggaaagccagacgagcgc
tcagatataattaggaaactaactgggcagattgttcaaatgagccagcagaaatttgcc
tccaatgttatagagaagtgtttaacttttggaactcttgctgagcgccaggcccttgtc
actgagatgctcggtaccactgatgaaaacgaaccccttcaggcaatgatgaaggaccag
ttcgcaaattatgttgtacagaaagttttggaaacttgtgatgaccagcaacttgaacta
atccttaaccgtattaaggttcatctgaatgctctgaagaagtatacttatgggaagcat
atagttgcacgtgtagagaaacttgttgctgctggagagaagaggattagcatcctgact
ccacaatgtccacctgctactgctactgcttag
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