Rosa chinensis (China rose): 112182837
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Entry
112182837 CDS
T06020
Name
(RefSeq) cyclic nucleotide-gated ion channel 1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
112182837
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rcn04040
]
112182837
Ion channels [BR:
rcn04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
112182837
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Motif
Pfam:
Ion_trans
cNMP_binding
DUF1240
Ribosomal_L6e
Motif
Other DBs
NCBI-GeneID:
112182837
NCBI-ProteinID:
XP_024177159
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Position
1:65979305..65982349
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AA seq
642 aa
AA seq
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MAFQMSRIQSGDIEENGEELIQKANSNHSSASLASVDSAVDKVYRAMGPGFEGLKSFKKT
MKIYYEVLSIGLSSNDKILYRRELIQHRWNKMLLVLCVIALSLDPLFCYILVVNDEKKCL
GLDRTLGAIASVLRFVVDFFYVFYIIYQFRASVVTLCSQSSKEEGELVPHTRARAWRYLL
LYFIFDILVILPLPQVIVYVVIPRLNNSRLFHATQSLYFIVIFQYVLRVLRICSLLKEAT
SSSGILAETAWAKAAFNLFLYMLASHVVGAFWYFFSIERKTSCWRKSCKMHATAHCSLYC
DDTFGASTFLNDSCSSKTPNSTFFDFGIYLGALESGVIESTDFMTKISYCFWWGLQNLSS
LGQSLKTSTFVWEVYFSVFVSLSGLILFAFLIGNMQTYLQSKTARLEEMRLKGQEIELWM
AFHSLPRKLKKRIWQYQKYKWQETKGVDVENFLHNLPRDIRRETKQYLCSGPLSQVPMLQ
NMDKRLLDAICDHLKPALYIEHSFILRKGDPLDEMLFITRGKVLTYTTEGNVGADCLEKG
DFYGQELLDWVLKTYPNASLSNLPFSTKTVQAHTKVEVFALRANDLKNVVSKFWWLFPSL
DQSRQPRAAHALQAAWRRYKQLQKTPPSKEGSVSRTDHAVVP
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttcaaatgtcaaggatacagagtggtgatatagaagaaaatggtgaagaacta
attcaaaaagctaatagtaatcattcaagtgcaagtttagcatcagtggactcggctgtc
gataaggtctatagagctatggggcctggttttgaagggctaaagagctttaagaaaacc
atgaaaatctattatgaagttttgtctataggcttgagttccaatgataaaattctttac
cgccgggaattaatccagcacaggtggaataagatgcttcttgttctgtgtgtcatcgct
ctctcactggatcctttgttttgttatattcttgtggttaatgatgagaagaagtgcctt
ggattggacagaacgttaggagctatagctagtgttctgcgatttgtcgtggatttcttt
tatgtgttttatatcatttatcaatttcgtgctagtgttgtcactctttgttctcaatca
tcaaaagaagaaggtgaactggttccacatactcgggcaagagcatggagatatttgttg
ttgtacttcatattcgacatccttgtaattcttccacttccacaggtgatagtttatgtt
gtcattccaagattgaataactcgagacttttccatgcaacacagtcattgtacttcata
gttatctttcaatacgtgctaagggttcttcgaatctgctcattgttaaaagaagccaca
agttcttctggcatccttgctgaaactgcatgggctaaagctgcctttaatctttttctt
tatatgcttgccagtcatgttgttggagccttttggtacttcttttcaatagaaaggaaa
acatcttgctggcgaaaatcctgtaaaatgcatgctactgctcactgttcgttatattgt
gacgatacttttggagctagcacttttctgaatgactcttgctcttcgaagacaccaaat
tccacattttttgattttggaatatacttaggtgctcttgaatctggtgtcatcgaatca
acagatttcatgacaaagatctcttactgcttttggtggggactgcaaaacctgagttcc
ctaggtcaaagcctcaaaacaagtacctttgtctgggaagtctacttctcagtttttgtt
tcactttctggattgatactgtttgcatttcttattggaaatatgcagacatatttgcaa
tcgaaaacagcaaggctggaggaaatgagattgaaggggcaagagatagagttgtggatg
gccttccattcccttcctcggaagctcaagaagcgaatatggcaataccagaaatacaaa
tggcaagaaactaaaggtgttgatgtggagaattttcttcacaatcttccccgggacatc
agaagggagacaaagcagtatctatgctctggtccactcagtcaagttccgatgcttcaa
aatatggataaacgattgcttgatgcaatatgtgatcatctgaagccagcactttacata
gagcacagcttcatacttcggaaaggagaccctctcgatgagatgttgttcatcactcgt
ggcaaagtattgacttacaccacagaaggcaatgtaggcgctgattgtcttgaaaagggt
gacttctatggccaagaacttcttgactgggtgctcaagacttatcccaatgccagccta
tccaaccttcccttctcaaccaaaacagtccaagcgcataccaaagttgaagtgtttgct
ctaagggctaatgacttgaagaatgtagtctctaagttctggtggcttttccccagtttg
gaccaatcacgccaaccaagggcagctcatgctttgcaagcagcatggcgccgctataaa
cagcttcaaaagactcccccgtctaaggagggcagtgtttctcgcactgaccatgctgta
gtcccataa
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