Rosa chinensis (China rose): 112188344
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Entry
112188344 CDS
T06020
Name
(RefSeq) ubiquitin domain-containing protein DSK2b isoform X1
KO
K04523
ubiquilin
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112188344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcn04131
]
112188344
03051 Proteasome [BR:
rcn03051
]
112188344
Membrane trafficking [BR:
rcn04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
112188344
Proteasome [BR:
rcn03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
112188344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
UBA
STI1-HOP_DP
Ubiquitin_2
Dsc3_N
Rad60-SLD_2
RAWUL
UBX
Dynactin_p22
HOIP-UBA
Motif
Other DBs
NCBI-GeneID:
112188344
NCBI-ProteinID:
XP_024183207
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Position
2:complement(10045288..10050152)
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AA seq
537 aa
AA seq
DB search
MGGGADDASTQSDGGDGVNINIRTPSGSKFAARISLDATVRALKEALSPKCDIPADQQRL
IYKGRILKDDQTLRSYGLEADHAVHLVRGFAPSAAANTAGATNAGSENSTQARGFGSNGG
GALGGSGNVNGMGSTGGLFGSAFPDLEQVQQQFRDIMNIPLFDNLASSTDMIQNMVMNNP
QMREIIDRNPEVGHVLNDPGTIRQTLEAARNPELMREMMRNSDRAMSNIEASPEGFNMLR
RMYENVQEPLLNASTMAGDAGGDSSNPFAALFVPQGENPTRTQSTNSSTASSDSATRPPA
PNTVPLPNPWSPTGPAGVAQTNTTRSNPLGDGRPQTPAGRTGLSFPEFEATMGAMQDAAL
LNQAVQNPAVSQLMQNIISNPQNMSENLGSDPQLRSMLDSNSFFREMMQNPEFFRQLASP
ETMQLFLILLQSLMLLLGDQQQQSTQEPGETGQTGGDTGSVDSMGLEMLMNMFGGLGTGS
PAVPNRPNVPPEELYAAQLSQLQEMGFFDRQENIRALMTTAGNVHAAVERLLGNSGR
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgggaggcggagccgacgacgcgtcgacccaatcggacggcggagacggagtcaacatc
aacatcagaacccccagcggctccaagttcgccgctcgcatcagcctcgacgccaccgtc
cgggcgctcaaggaagctctctcgcccaagtgcgacattccggctgatcagcagcgcctg
atttacaagggccggatcttgaaggacgatcagactctccggagctacggtttggaggca
gatcatgctgttcacttggttcgtggctttgcaccatctgctgcagccaacactgctggt
gcaaccaatgctggaagtgaaaattctacccaagcaaggggttttggatctaatggaggt
ggagcattgggaggatctggcaatgtcaatgggatgggcagcactggtggtttatttgga
tcagcgtttcctgacttggaacaagtgcagcaacaatttagagacataatgaacatccct
ctctttgacaatcttgcgagtagcactgacatgatacagaacatggttatgaacaaccct
caaatgcgtgaaattattgatcggaatcctgaggtaggacacgttctcaatgatcctggc
actattcgtcagacacttgaagcagcaagaaaccctgagcttatgcgtgagatgatgcgc
aacagtgacagggctatgagcaacattgaagcttcacctgagggatttaacatgcttaga
cgtatgtatgaaaatgtacaagagccattactgaatgcatcaaccatggctggtgatgct
gggggtgatagttcaaatccatttgcagctctgttcgtcccccaaggtgaaaacccaacc
agaactcagtcaactaactcatcaactgctagttctgattcagcaactaggccccctgct
ccaaatacggtcccacttcccaacccatggtcacctacaggcccagctggagttgcccaa
actaacaccacgaggtcgaaccctctaggggatggtaggccgcagacaccagctggccgt
actggacttagttttccagagtttgaagccacgatgggtgcgatgcaggatgccgcttta
ctgaatcaggccgtacaaaacccagctgtttctcagctcatgcaaaacatcatctccaat
cctcagaatatgagtgagaatcttgggtccgacccccagttacgcagcatgcttgattca
aattctttctttagagaaatgatgcaaaaccctgaattttttcgtcagttggcttctcct
gagactatgcagttattcttgattttgctacaatcacttatgttgctgctaggtgaccaa
caacaacaatcaacccaggaaccaggagagacaggacagactggtggagacacaggatca
gttgatagcatggggttagagatgctgatgaacatgtttggtgggcttggcactggcagc
ccggctgttcccaacagaccaaatgtgccaccggaggaactctatgctgcacagctttca
caacttcaggagatgggtttctttgatagacaagagaacatacgggctctgatgaccact
gcaggaaatgtccatgcagcagtagagcgactgttggggaattctggtcgatag
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