Rosa chinensis (China rose): 112191373
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Entry
112191373 CDS
T06020
Name
(RefSeq) ABC transporter B family member 4 isoform X3
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112191373
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rcn02000
]
112191373
04147 Exosome [BR:
rcn04147
]
112191373
04090 CD molecules [BR:
rcn04090
]
112191373
Enzymes [BR:
rcn01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
112191373
Transporters [BR:
rcn02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
112191373
Exosome [BR:
rcn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112191373
CD molecules [BR:
rcn04090
]
Proteins
112191373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
ABC_ATPase
RsgA_GTPase
AAA_22
AAA_21
AAA_15
AAA_16
Zeta_toxin
AAA_23
AAA_25
DEAD
AAA_7
DLIC
DUF815
Sigma54_activ_2
AAA_30
Motif
Other DBs
NCBI-GeneID:
112191373
NCBI-ProteinID:
XP_024186462
LinkDB
All DBs
Position
3:complement(468394..473870)
Genome browser
AA seq
1285 aa
AA seq
DB search
MAEKNGLGGNTNMDEDEALPSESKAEKANRSCSITEIQEDSNKKTKGNETVPFLKLFSFA
DSTDILLMTIGTIGAIGNGLCMPIMTILFGQLTDSFGYNYNSKDIVHVVSKVSLRYVYLA
LGAGVAAFLQVACWMATGERQAARIRSLYLKTILRQEVAFFDMETNTGEVVGRMSGDTVL
IQDAMGEKVGKFLQLISTFIGGIVIAFIKGWLLTLVLMSTIPFLVAAGAIMSIIIVKMAS
RGQNAYAKAASVVEQTISSIRTVASFTGETQAITNYKKYLVDAYKSGVHEGLAAGLGFGM
FMLVMLSSYGLATWFGAKMVLERGYKGGAVVNVIVAVLAGSMSLGQVSPCMSAFAAGQAA
AFKMFETIKRKPEIDACDTKGMVLDDIHGDIELRDIYFSYPTRPNEQIFQGLTLSIPSGT
TTALVGQSGSGKSTVICLIERFYDPWAGEVLVDGINLKDFQLKWIRGKIGLVSQEPVLFA
SSIRDNILYGKDGATSEEIRAALVLANAAKFIDKLPQGLDTMVGEHGTQLSGGQKQRVAI
ARAVLKDPRILLLDEATSALDAETELIVQEALDRIMVNRTTLIVAHRLSTVRNADIIAVL
HKGKVMEKGPHSELVRDPDGAYSQLIHLQELSEDTEQAADHQTTSEISKKKSLQRSLSHD
SSGAGSSSRHSFKLPFGFPTGLEVVDIVTKEPESLTTSMQQSPKAPIRRLAYLNKPEIPV
LVIGATAAIANGVIFPVVGLIISSAIKTLYEPPHQLKKDSKFWALMYVTLGLASLLVIPV
RSYFFSVAGCKLIERIRLMCFTKVVHMEIGWFDEPRSGEIGAKLSANAATVRSLVGDALA
QLIGNIASAVAGLVIAFVACWQLAFIVLVLFPLIGVTGYMELKFMKGFSADSKMMYEEAS
QVATDAVGSIRTVASFCAEEKVVQQYNTKCEGPMRTGIRQGIISGMGFGLSFFLMFSVYA
TSFYAGAQLVVHGKTTFLDVFRVFFSLTMAAMTISQSSSLAPDSSKANAATASIFAIIDQ
ESKIDPSDESGMTMDNVKGDIELRNVCFRYPSRPDVQIFQDLNLVIHSGKTVALVGESGS
GKSTVISLLQRFYDPNSGHITLDGVEIWKLQLKWLRQQMGLVIQEPVLFNDTIRANIAYG
KEGNATEAEILAASESANAHNFISGLQEGYDTIVGERGVQLSGGQKQRVAIARAIVKSPK
ILLLDEATSALDAESEKVVQDALDLVMLNRTTVVVAHRLSTIRNANVIAVVRDGAVVEKG
KHETLISVKDGFYASLVALHNTHQD
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaaaaatggcttgggtggcaatacaaatatggatgaagatgaagcactacca
tcagaaagcaaagcggaaaaagcaaacagaagctgtagcatcactgagatacaggaagac
tcaaacaagaagaccaaaggaaatgagaccgttccatttctcaagctgttttcatttgca
gattcaactgatatcttattgatgaccatcggcacaattggtgccattgggaatggtttg
tgtatgcccattatgactatactctttggccaactgactgattcttttggatataattac
aatagcaaagacatagttcatgttgtttccaaggtctctctaagatatgtctacctggct
ttgggggctggtgttgcagcattcctccaggtagcttgctggatggccacaggggagcga
caggctgcacgcataaggagtttgtacctgaaaaccatattgaggcaagaagtagctttc
ttcgatatggaaacaaacactggagaggttgttgggaggatgtctggtgatactgtcttg
atacaagatgcaatgggcgagaaggttggaaagtttttacaactaatatcgacattcatt
ggaggcattgtcatagcattcatcaaaggctggcttctaaccctcgtcctgatgtccact
attccatttcttgtggcagccggagcaataatgtccattatcatagtcaaaatggcttcc
cgaggacaaaatgcctatgcgaaagctgcaagtgtagttgaacaaacaatcagctcaatc
agaactgttgcatcatttaccggagagacacaagctataacaaactataagaaatatctt
gtagatgcttacaagtctggtgttcatgaaggcttggcagccggattgggttttggcatg
tttatgttggttatgttatccagttatggtttggctacatggtttggtgcaaaaatggta
ttggaacgaggatataaaggaggagctgtggtcaatgtgattgttgctgtgctggctggt
tccatgtctctaggccaggtatctccctgtatgagtgcatttgctgctggtcaggctgca
gcctttaagatgtttgagactataaagaggaaaccagagatagatgcttgtgatacaaaa
ggaatggtattggatgacattcatggtgacatagagctgagggatatttacttcagttat
ccaaccagaccgaacgaacaaatattccaaggattgactctgagtatccctagtggcaca
actacagctttggttgggcaaagtggaagcggaaagtcgacagtgatctgcctgatagag
agattctatgatccatgggctggtgaggttctcgtagatggtatcaaccttaaagacttt
cagcttaaatggatcagaggaaaaattggtctagtcagccaggaaccggtgttgtttgca
tcgagcatccgggacaatattttatatggaaaggatggtgcaacttctgaagagataaga
gcagcattagtacttgcaaatgctgctaagtttattgacaaattgcctcaggggctggac
accatggttggggagcatggaactcagctgtctggtggacagaagcagagggttgccata
gctcgagcagttcttaaagacccgcgaatattacttctagatgaagctacaagtgcactg
gatgcagaaactgagctaattgtacaagaggcattggaccgaattatggtcaatcgaact
actctcattgttgcacatcgtttgagcacggtgaggaatgctgatatcattgctgttctt
cataaaggaaaggtgatggagaaaggtccacactcggaactagttagggatcctgatgga
gcctactctcagcttatacacttgcaagagttaagtgaagacacagaacaagctgcagac
catcaaacaacgtcagaaatcagtaaaaaaaaatcattgcaaagatccttaagtcatgat
tcatccggagcaggaagtagcagccgccactcattcaaactaccattcggatttcccaca
ggacttgaggtagtagatattgttacaaaagaaccagaatcccttacaacaagtatgcaa
caatctccaaaggctcctatccgccgccttgcctaccttaacaagccagagattccagtg
ctagtaattggagctacagctgcaatagccaatggtgtgatatttccagttgttggtcta
ataatttccagtgccatcaaaacattatatgaaccacctcatcaacttaaaaaggattct
aagttttgggcactaatgtatgtgacccttggtttggcttccttactggtgattccagta
agatcatacttcttttctgtggctggatgcaagctaattgaacgtattagattgatgtgt
ttcacaaaggtggttcacatggagattggttggtttgatgagcctcggagtggcgaaatt
ggtgcaaagctctcggcaaatgcagccacagtgcgctccctagttggtgatgcacttgct
cagctgattggaaatattgcatcggcagttgccggtttagtgattgcttttgttgcatgt
tggcagctggcatttattgtcctggtattgttccctcttattggtgtcacaggatatatg
gaattaaaatttatgaaagggttcagcgcagattcaaagatgatgtatgaggaagcaagc
caggttgctaccgatgcagttgggagtataagaacagttgcttctttctgcgccgaagag
aaggtggtgcaacaatacaacacaaaatgtgaaggccctatgaggacagggataaggcaa
ggtattatcagtggcatgggattcggattatcgttcttcttgatgttttctgtctacgca
acaagtttttacgcaggagctcaactagtggtgcatggcaaaacaacattcttagatgtt
tttcgggttttcttctctctaactatggctgctatgacgatttctcaatcgagttcctta
gctcctgattcatctaaagccaatgctgctactgcttctatctttgccataatagaccag
gagtcaaagattgatccgagtgatgagtctgggatgacaatggacaatgtaaagggagat
attgagcttcgtaatgtatgcttcaggtatccgtccaggccagacgttcagatttttcaa
gacctcaacctagttattcattctggcaagacagttgccttggttggagaaagtgggagt
gggaaatccaccgtgatctcactgttgcaaagattttatgatcctaactcgggtcatatt
actctcgatggtgttgaaatttggaagctccaattgaagtggctgaggcaacaaatggga
cttgtgatccaagaaccagttttgtttaacgatacaattcgtgccaacattgcatatgga
aaggaaggaaatgcaacagaagctgaaatcctggctgcatccgagtctgccaatgcccac
aatttcattagtggcttacaagagggctatgacaccatagtgggggaacgaggagtccaa
ttgtcaggtggacagaagcaacgtgtagcgattgcgcgtgctattgttaaaagccccaag
atcttactactagatgaggctaccagtgcactagatgctgaatctgagaaagtagtacaa
gatgcattagaccttgtcatgctgaatcggacaacagttgtggtggcacatagattatct
acaatcagaaatgcaaacgtaattgcagttgtcagagacggagctgtagtagagaaagga
aagcatgagactttgattagcgtcaaggatggtttctatgcctccttagttgcattacac
aatacacatcaagactaa
DBGET
integrated database retrieval system
