Rosa chinensis (China rose): 112192978
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Entry
112192978 CDS
T06020
Name
(RefSeq) ABC transporter B family member 4
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112192978
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rcn02000
]
112192978
04147 Exosome [BR:
rcn04147
]
112192978
04090 CD molecules [BR:
rcn04090
]
112192978
Enzymes [BR:
rcn01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
112192978
Transporters [BR:
rcn02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
112192978
Exosome [BR:
rcn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112192978
CD molecules [BR:
rcn04090
]
Proteins
112192978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_22
AAA_16
RsgA_GTPase
AAA_21
ABC_ATPase
Zeta_toxin
DEAD
AAA_5
DUF87
AAA_25
AAA_15
AAA_30
DUF815
DLIC
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
112192978
NCBI-ProteinID:
XP_024188719
LinkDB
All DBs
Position
3:complement(32741277..32748653)
Genome browser
AA seq
1295 aa
AA seq
DB search
MAEENGVNGDTKNHENHAEEEKSSAPINRDQPGSSDSNGDEKVEKIPFSKLFSFADKTDV
ILMVVGTIGAIGNGSCMPLMTLLFGEMIDSFGSNQNSDIVSVVSKVSLKFVYLAVGAAVA
AFLQVSCWMVTGERQAARIRGLYLKTILRQDVAFFDMETNTGEVVGRMSGDTVLIQDAMG
EKVGKFLLLLSTFIGGFIIAFIKGWLLTLVMLSYIPLLVASGAMMSIIITKMASRGQTAY
AKAANVVEQTIGSIRTVASFTGEREAITSYNKYLVDAYKSGVHEGSVAGIGLGLVMCIVF
SSYALAVWFGSKMIRENGYTGGEVLNVIVAVLTGSMSLGQTSPCMSAFAAGQAAAYKMFQ
TISRKPEIDAYDEKGKTLGDISGDIELRDVYFSYPARPDEQIFDGFSLCIPSGTTAALVG
QSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLKWIRSKIGLVSQEPVLFASSIKEN
IAYGKDGATTEEIQAAAELANAAKFVDKLPQGLDSLVGEHGTQLSGGQKQRIAIARAILK
DPRILLLDEATSALDAESERVVQEALDRIMVNRTTVVVAHRLSTVRNADMIAVIHKGKMV
EKGSHLNLLKDPEGAYSQLIRLQEVNKESEQTSEDQNKPEITLASLRQSSQRTSSQRLSF
ARSLSRNSSVGNSSRHSYSVAFGLPTGLGGIGVQDAAYEETELAPEQPPKVSLRRIAALN
KPEIPVLIIGTIAAIINGVILPIFGVLISRVIKTFYEPPHQQKKDAAFWAIIFMILGLIS
FLAIPAQGYFFSVAGSKLIQRIRLLCFERVVHMEVGWFDEPENSSGAIGARLSADAASVR
ALVGDALAQMVQNMAAAVAGLVIAYIACWQLAFIILALLPLIAVNGYVQIKFMKGFSADA
KMMYEEASQVANDAVGSIRTVASFCAEEKVMELYRRKCEGPMKTGIRQGLISGIGFGVSF
FFLFCVYTTSFYAGAQLVKAGKTTFTDVFKVLFALTMAATGISQSSSFGPDSGKAKTSAA
SIFAIIDRPSKIDPSNESGTKIDGGVKGEIELHYVSFKYPSRPETPIFRDLNLTILSGKT
VALVGESGSGKSTVVALLQRFYDPDSGHITLDGIELGNYNLKWLRQQMGLVSQEPVLFND
TIRANIAYGKEETATEAEIIAASELANAHKFISSLHQGYDTVVGERGIQLSGGQKQRVAI
ARAIIKSPKILLLDEATSALDAESERVVQDALDQVMVNRTTVVVAHRLSTIKNADVIAVV
KNGVIVENGKHDNLINITDGFYASLVALHMSSSTA
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggagaatggagtgaatggtgataccaaaaatcatgaaaaccatgcagaagaa
gagaaaagctcagcccccataaatagggatcagccaggctcatcagatagcaatggagat
gagaaagttgaaaagattcctttctccaagctattctcctttgcagataagactgatgtt
atcttgatggttgtcggcacgattggtgccattgggaatggttcttgtatgcccctcatg
acgctattgtttggggagatgatagattcttttggatctaatcaaaattcagacatagtc
tcagttgtttcaaaggtctctctgaaatttgtttacctggctgtgggagcagcagtggca
gcattcctccaggtgtcttgctggatggtcacaggggaaagacaagctgcaagaattaga
ggtttgtatttgaaaacaatattgagacaagatgttgccttcttcgatatggaaacaaac
accggagaggtagttgggagaatgtctggtgatactgttctcattcaagatgccatgggg
gagaaggttggaaaattcttactgctgctttcaacattcattggagggtttataatagca
ttcatcaaagggtggcttctcactcttgtcatgctatcctatattcctttgcttgtggca
tctggtgcaatgatgtccatcattataaccaagatggcatcccgtggacaaactgcttac
gcaaaagcagcaaatgtagttgaacaaacaattgggtccattagaactgttgcatcattt
actggcgagagggaagctataactagttataacaaatatctcgtagatgcttacaaatca
ggtgttcatgaaggttcagttgctggaataggtcttggcttggttatgtgtattgtgttc
agctcatatgccttggctgtatggtttggttcaaagatgataagggaaaatggatatact
gggggtgaagtactgaatgtgattgttgctgtgttgactggatctatgtctttagggcag
acatcaccatgcatgagtgcatttgctgctggtcaagctgcagcttataagatgtttcag
actattagtaggaagccagaaatagatgcttatgatgaaaagggaaagactttgggtgac
atttcgggagacatagagttgagagatgtttatttcagctatccagccagaccggatgag
caaatatttgacgggttctctctttgtatccctagtggcacaactgctgctttggttgga
caaagtggaagtggcaagtcaacagtcatcagtctgatagaaagattttatgatccgcaa
gctggtgaagttttaatagatggcataaacctaaaagaatttcaacttaaatggattcgg
agtaaaattggtcttgtcagtcaggaacctgtcctgtttgcatccagcattaaggaaaat
attgcctatggaaaggatggtgctaccactgaagagatacaagcagcagctgagcttgca
aatgcggctaaatttgttgataaattgcctcagggccttgacagcttggtcggtgagcat
ggaactcagctatctggtgggcagaagcagagaattgctattgcaagagcaattttgaaa
gacccaaggattttacttctggatgaagctacaagtgcacttgatgcagaatctgagagg
gtagttcaagaagcattggataggattatggttaaccgaactactgttgttgtcgctcat
cgtttgagtacagtgaggaatgcagacatgattgctgtcattcataaaggaaagatggtt
gaaaaaggttcgcacttgaatttactcaaagatcctgagggagcttactctcagcttata
cgcttgcaagaagtaaacaaagagtcagaacaaacgtcagaagaccaaaacaaacctgaa
ataactctggcatctcttagacagtcaagtcaaagaacatcgagtcaaagactttcgttt
gcacgatccttaagtagaaattcctccgtaggaaatagcagccgtcactcatattcagtg
gcatttggtttacccactggacttggaggcattggtgtccaagatgctgcatatgaagaa
acagaactagcaccagagcaacctccaaaggtctcactccgccgcattgctgccctgaac
aaacctgagattccagttcttattattggaactatagctgcaatcatcaatggtgttata
cttccaatattcggtgtgctcatttccagggttataaagactttctatgaaccacctcat
caacagaagaaagatgcagcattttgggcaataatttttatgatccttggtctgatatca
ttcttggcgatcccagcacaaggatatttcttttcagtagctggcagcaagttaattcag
cgtatcagattattgtgttttgagagagtggttcacatggaggttgggtggtttgatgag
cctgagaactcaagtggtgcaattggtgcaaggctctcagcagatgcagcgtcggtgagg
gccctagtcggagacgctctagctcagatggttcaaaacatggcagctgcagttgcaggt
ttggtcattgcttatattgcatgttggcagctggcatttattatcctcgcactgcttcct
ctcattgcagttaacggatatgtacaaataaagttcatgaaaggattcagcgcagatgca
aagatgatgtatgaggaggcaagccaagttgctaatgacgcagttggaagtataagaaca
gttgcttctttctgtgctgaagagaaggtaatggaactatacagaaggaaatgtgaaggc
cctatgaagacagggataagacaaggcttgatcagtggtataggatttggggtatctttc
ttctttttgttttgtgtctacacaaccagtttctatgcgggagctcaacttgtgaaggct
ggcaaaacaacatttacagacgttttcaaagttttatttgctctgaccatggcagctacc
ggaatttctcaatcaagctcctttggtcccgattctggtaaagccaaaacttctgctgct
tccatatttgcaataatagaccggccatcaaagatagacccaagtaacgagtctggtacg
aaaattgatggtggtgtgaaaggagagattgagcttcactatgtaagctttaagtatcca
tctaggccagaaacacctattttccgagacctcaatttaactatcctctctggcaagact
gttgccctggtcggagaaagtgggagcggaaaatcaactgttgttgcattgttgcaaaga
ttttatgatccggattcaggtcatatcacacttgatggaattgaacttggcaactacaac
ttgaaatggttgaggcagcagatgggactcgtaagccaagaacctgttttatttaatgac
accattcgcgccaacattgcgtatggaaaggaagaaactgcaactgaggcagaaattata
gctgcatcagagttggccaatgcccacaagttcatcagtagcctacaccagggctatgat
accgtagtaggagaacgaggaatccaattatccggggggcagaagcaacgtgtagccatt
gcacgtgctataatcaagagccccaagatattactgttggatgaagctacgagtgcactt
gatgccgaatctgagagagtggttcaagatgcattagaccaagtcatggtgaaccggaca
acagtggtggtggctcatagactatccacaatcaagaatgctgatgtgattgcagtggtt
aaaaatggagttatagtagagaatgggaagcatgacaatttgattaatatcaccgatggg
ttttatgcatccctagttgctcttcacatgagctcttcaactgcatga
DBGET
integrated database retrieval system
