Rosa chinensis (China rose): 112194777
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Entry
112194777 CDS
T06020
Name
(RefSeq) cyclic nucleotide-gated ion channel 1 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
112194777
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rcn04040
]
112194777
Ion channels [BR:
rcn04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
112194777
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
112194777
NCBI-ProteinID:
XP_024190776
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Position
3:complement(48303155..48317336)
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AA seq
562 aa
AA seq
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MTFSTARLYRYIRFLSHHPILGFVSFIAHIIPVYLCPFIRTVDLLAAGDVPVVALPSVVY
LFLDPLFLYAPLINGDTKCLVLDHRLKITALVFRSWGDLHYLVKMFEGLRRKSPISKKLS
GLAIDTLAILPIPQVTILGFLPKMRGSNSLKTMNVLTSLIVLQYLPRGYPLYQLCSTWNT
WTIGGTGYKLPNWSLIVINIYGYIIASHIFGAFWYFFSIQREIECWEHACRIENGCEFST
SCVQNTYRNITLLKNLCPIDPPNKQIFDFGIFRDALQSGIQGSTNFSQKWLRCFSWGIRN
LSSFGSNLGDTSAYGWENLFVVLISISGLLLFMYLLGHVQEIMQKVNKPIKEMINIRSIL
HEYGMSDDENHGMEKKIKLVVKSKLQHVENPIVENMSSILSLVEDKKFTMQIRRKLFMDK
LKKVEGLKDRTEEVLEKICECLEPMIYRKGCYIIREGEPLDMMFFVTWGNVLTYATNNGG
SNGSSGTIQHEKEKDDLYGKELLTWAEERSDKLSYLPISPITVKSHNKVEVFALQATVLQ
LVVSKFQSQFNLTIAVDNEIVN
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgacattctcgactgcacggctctatagatatatcagattcctttcacatcatcctatt
ttaggctttgtaagtttcatagcccatataataccggtgtacttgtgcccattcatacgc
actgtcgatcttctcgctgctggtgatgttccagttgttgccctaccatctgtggtgtat
ctgttcttggatcctctgtttctatatgctcctttaatcaacggggacaccaaatgtctc
gtgttagaccacagattgaagataacagctcttgtttttcgatcttggggagatcttcat
tacctagtaaagatgtttgaaggccttcggcggaagagccctatctctaagaaactgtcg
gggctggcaattgacacgctggctattctacctattccacaagttacaatcttaggtttt
cttccgaagatgaggggctccaactctttgaagacaatgaatgttctcacctcccttatt
gtactgcaatatctgccacgaggttaccccctctatcaactgtgcagtacgtggaataca
tggaccattggcggtacgggatacaagcttccaaattggtctttaattgtcatcaatatc
tatgggtacattattgccagccatatattcggagcattttggtactttttctccatccaa
cgagagatagagtgttgggaacatgcttgcagaattgaaaatggatgtgaatttagtact
tcatgtgttcaaaatacatacagaaatatcacacttttgaagaacttgtgccctatagat
cccccaaataaacaaatattcgattttggcatatttcgtgatgctttacaatccggcatt
caaggatcaacaaatttttcacaaaaatggctgcgatgtttttcatggggcatacgaaat
ctaagttcttttggttcaaaccttggtgataccagtgcatatggatgggaaaacttgttt
gtggttctcatttcgataagtggcttgctactgtttatgtatctcttggggcacgtgcag
gaaattatgcagaaggtcaacaaaccaattaaagaaatgattaatatacgatccatatta
catgaatatggcatgtctgatgatgagaatcatgggatggagaagaaaatcaagcttgtg
gtaaagtctaaacttcaacacgttgaaaaccctattgtggagaatatgtcttcaattctt
tccctagtagaagataaaaaatttactatgcagatcagacgcaaactcttcatggataaa
ctcaagaaagtcgaagggcttaaagatagaacggaagaagttttggaaaaaatttgtgag
tgtcttgagccaatgatctataggaagggatgctacattattcgagagggggagccactt
gatatgatgttcttcgtcacatggggcaatgtactcacctatgcgactaataatggtgga
tcaaatggttcttcaggtaccatccaacatgagaaagagaaagatgatctgtatggcaaa
gagcttctaacttgggcagaagagcgttctgacaaattgtcctacttaccgatctctccc
ataactgtcaagtcccacaacaaagttgaagtctttgctctccaagctaccgttttacag
cttgttgtctctaaattccaaagtcagttcaatctcaccatagctgtcgataatgaaata
gtgaattaa
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