Rosa chinensis (China rose): 112197543
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Entry
112197543 CDS
T06020
Name
(RefSeq) ABC transporter B family member 4
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112197543
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rcn02000
]
112197543
04147 Exosome [BR:
rcn04147
]
112197543
04090 CD molecules [BR:
rcn04090
]
112197543
Enzymes [BR:
rcn01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
112197543
Transporters [BR:
rcn02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
112197543
Exosome [BR:
rcn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112197543
CD molecules [BR:
rcn04090
]
Proteins
112197543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
AAA_22
AAA_16
Zeta_toxin
RsgA_GTPase
AAA_21
AAA_30
AAA_15
DUF815
AAA_7
AAA_24
DEAD
nSTAND1
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
112197543
NCBI-ProteinID:
XP_024194039
LinkDB
All DBs
Position
4:52905553..52911657
Genome browser
AA seq
1301 aa
AA seq
DB search
MGDQENPLDGDHVIREEAAASKSQSAVPESQNGPESRSNKEDASKSKEGGTKAVPFFKLF
SFADSMDYLLMSVGTIGAIGNGVCMPLMTIIMGEVINSFGESGNSNKVVDTVSKVALKYV
YLALGAAAASFLQMSCWMITGERQAARIRCLYLKTILRQDVSFFDKETNTGEIIGRMSGD
TVLIQEAMGEKVGTCIQLVATFFGGFIIAFVKGWLLTLVMLSSIPALVISGATMSIIISK
LASRGQAAYSAGATVVEQTIGSIRTVASFTGEKQAITKYNNSITKAYKSGVQEGLASGLG
IGSVMLIIFCSYALAIWYGGKMILEKGYKGGDVMNVVFAVLTGSLSLGQTSPCLAAFASG
KAAAYKMFETISRNPEIDASDTKGKQLQDIKGDIELRDVHFSYPARPDEHIFRGFSLTIP
SGATAALVGESGSGKSTVISLIERFYDPQAGEVLIDGVNLKEFQLKWIRQKIGLVSQEPV
LFTCSIRDNIGYGKDGATTEEIRAAAELANAAKFIDKLPQGLDTMVGEHGTQLSGGQKQR
VAIARAILKNPRILLLDEATSALDAESERVVQEALDRIMVNRTTVIVAHRLSTVRNADTI
AVIHRGTIVEQGPHSELVKDPEGAYSQLIRLQETRTVSEQTGVNDQDRPDISSDSRRQSS
QRFSLLRSISRGSSGKANSGRHSFSISYGGAPTAIGILETNPDEPDTHAPASSKGHPEVS
LGRLAALNKPEIPVLLLGTLAAAANGVILPVFGILISSVIKTFFEPPDQLSKDSKFWALI
FVVLGVASFLAQPSRAYLFGVAGCKLIRRVRSKCFEKVVYMDVGWFDESDHSSGAIGARL
STDAASLRGLVGDALGLLVQNLATAVAGLVIAFVANWQLALIILVLLPLLGLSGYFQVKL
MKGFSADAKKMYEDASQVANDAVGSIRTIASFCAEEKVMELYQKKCEGPIKNGIRQGLVS
GIGFGLSFFFLFSVYACSFYAGAQLVEAGKTEFSDVFRVFFALTMTAVGISQSSSLAPDI
SKGKSSASSIFAILDGKSKIDSSDDSGTTIENVKGDIELRHVSFKYPTRPNVPIFQDLCL
TIRHGKTVALVGESGSGKSTVISLLQRFYDPDSGHITLDGIEIQKLQLKWLRQQMGLVSQ
EPLLFNDTIRANIAYGKDGNATEGEIIAAAELANAHKFISSLQQGYDTVVGERGVQMSGG
QKQRVAIARAIMKEPKILLLDEATSALDAESERVVQDALDRVMVDRTTVVVAHRLSTIRS
ADLIAVVKNGVIAEKGKHETLINIKDGTYASLVALHASASS
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatcaggagaatcctttggatggagatcatgtgatcagagaggaagctgccgcg
tcgaaaagtcaatcagcagtgccggaatcccagaatggaccggaaagtaggagtaacaag
gaagatgcaagcaagagcaaggagggtggcaccaaggcagtaccctttttcaagctcttc
tcatttgctgattccatggattacttgttaatgtcggttggtacgattggcgctatcgga
aatggagtgtgtatgcctctaatgaccataatcatgggagaagtgattaattcttttgga
gaatctgggaattccaataaagtggttgacacagtgtctaaggtggctctaaagtatgtc
tacttggctttgggagccgcagctgcttcatttctacagatgtcttgttggatgatcacc
ggagagagacaggctgcgagaattagatgtttatacttgaaaacaatattgaggcaagat
gtaagcttttttgataaagaaactaacactggagaaattattgggaggatgtcaggtgat
actgtgctcattcaggaggccatgggagagaaggtaggaacttgtatccagttagttgca
acattctttggaggctttatcatagcctttgttaagggatggcttcttaccctggtcatg
ctttcttctatccccgctctggtcatctctggtgctaccatgagcatcatcatatcaaag
ttggcatctcgtggacaagctgcttattcagcgggagcaactgtggttgagcagacaatt
ggttcaataagaactgttgcatcatttacaggggagaaacaagctataactaagtacaac
aactctattactaaagcttacaagtctggtgtgcaagagggtttggcatctgggttgggt
atcggttcagttatgcttattatcttctgtagttatgctctggctatatggtatggcgga
aaaatgatacttgaaaagggatataaaggaggagatgtcatgaatgtagtttttgctgtg
ttgactggctccttgtctcttgggcagacatctccatgcttggcagcatttgcttctggg
aaagctgcagcttacaagatgtttgagacaattagcagaaacccagagatagatgcttct
gatactaaagggaagcaattacaagatattaaaggagacatagaactgagggatgttcat
tttagttatcctgcaagaccagatgaacatatattccgtggattttctctcacaatacct
agtggtgcaactgctgctttggtaggagagagcggaagtggtaaatcgactgtaatcagt
ttgatcgagagattttatgacccacaggctggtgaagttcttattgatggtgtcaatctc
aaagagttccagctgaaatggatcagacagaaaataggtcttgtcagccaggaacctgta
ttgtttacttgcagcattagagataatattggctatgggaaggatggtgcaactactgaa
gagataagggctgctgctgagcttgccaatgctgctaaattcatagacaaacttcctcag
ggactagatacaatggtgggtgagcatggaactcaactatctgggggccaaaagcagaga
gttgctatagctcgagcaattctaaaaaacccaagaattctacttctagatgaagccaca
agtgctcttgatgcagaatctgagagagttgtgcaggaggcactggatagaattatggtt
aaccggactactgtcatagtagcccatcgcttgagcacagtaaggaatgctgataccatt
gctgtcatacatcgaggaacaattgttgaacaaggaccacattccgagctagttaaggat
cctgagggagcatatagccagcttataagattacaagaaacaagaactgtgtcagaacag
actggtgtaaatgatcaggataggccagatatttcttctgattctcggagacagtcaagt
caaagattttctttattaagatccataagccgtggatcatctggaaaagcaaatagtggt
cgtcactcattctcaatctcatatggtggtgcgcctactgcaatcggcatccttgaaaca
aatcctgatgaacctgatactcatgctccagcatcatctaaagggcatccagaagtctca
cttggccgcctagctgccctgaacaagccagagatcccagtgctgcttcttggtacttta
gctgcagcagccaacggggtgatcttacctgtttttgggatactaatatctagtgtaatc
aagaccttctttgagccacctgaccaactgagtaaggattcaaagttttgggcattaatc
tttgttgttcttggagttgcatcattcttggcacaaccatcaagagcatacctttttggt
gtggctggatgtaagttgataagaagagttcgatcaaagtgctttgagaaggtggtttac
atggacgtaggttggtttgatgagtctgatcattcaagtggtgcaattggggcaaggctt
tctacagatgcggcttctctaagagggttggttggagatgctctaggtttattggttcag
aatttagcaactgcagttgccggcctagttattgcttttgtagcaaattggcaattggct
cttataattcttgtcctgctgccactgttaggacttagtggatattttcaagtcaagtta
atgaaagggttcagtgcagatgcaaagaaaatgtacgaggacgcaagccaagtagccaat
gatgctgttgggagtattagaacaattgcttccttttgtgctgaagagaaggtgatggaa
ctgtaccagaaaaaatgtgaaggtcctattaaaaatgggataagacaaggcttagttagc
ggaattggttttgggctatcgttctttttcctattttcagtgtatgcctgcagtttctac
gctggagcccaacttgttgaagcaggcaagacagaattttctgacgtgtttcgggttttc
tttgctctcactatgacagctgtaggaatatctcagtcgagctccctagcccctgatata
agtaaaggaaagagttccgcttcttccatatttgcaattcttgacggcaagtcaaaaata
gactctagtgacgactctggaactacaatagaaaatgtgaagggagatattgaactacgc
catgtcagcttcaagtatccaactagacccaacgtgccaatcttccaggatctttgcttg
accattcgtcatggcaagacggttgctctggttggagaaagtggtagtgggaagtcgaca
gtgatctcattgttgcagagattttatgaccctgattcaggtcacattacattagatgga
atcgaaatccaaaagctacaattgaagtggttgagacagcaaatggggctggtgagccaa
gagcctctgctgtttaatgacactatccgtgccaacattgcatatggaaaggatgggaat
gcaaccgaaggtgaaattatagctgcagcagaattggcaaatgcccacaagttcattagt
agcttacaacagggttacgatacagtagtaggagagcggggggtccaaatgtcaggtgga
cagaaacagagggtggcaattgcacgagctattatgaaggagccaaagatattactccta
gatgaggccaccagtgcacttgatgctgagtctgaacgagtcgttcaagacgcattggac
agagtaatggtggatcgaacaacagtggtggttgctcatcggttatcgacaatcagaagt
gcagatttgatagcagtggtaaagaatggggtcattgcagagaaaggaaagcatgagact
ttgatcaatatcaaggatggcacttatgcttctctggtagcattacatgcaagtgcctca
tcttag
DBGET
integrated database retrieval system
