Rosa chinensis (China rose): 112197947
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Entry
112197947 CDS
T06020
Name
(RefSeq) ABC transporter B family member 11
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112197947
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rcn02000
]
112197947
04147 Exosome [BR:
rcn04147
]
112197947
04090 CD molecules [BR:
rcn04090
]
112197947
Enzymes [BR:
rcn01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
112197947
Transporters [BR:
rcn02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
112197947
Exosome [BR:
rcn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112197947
CD molecules [BR:
rcn04090
]
Proteins
112197947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_22
ABC_ATPase
Zeta_toxin
RsgA_GTPase
AAA_21
AAA_16
AAA_15
AAA_5
AAA_30
DEAD
AAA_24
AAA_7
nSTAND1
SbcC_Walker_B
4HB_MCP_1
DUF2585
Motif
Other DBs
NCBI-GeneID:
112197947
NCBI-ProteinID:
XP_040375288
LinkDB
All DBs
Position
4:complement(52530069..52535741)
Genome browser
AA seq
1285 aa
AA seq
DB search
MADHEEQSDGDVLKEPAMASTKAADSENNKQDTAGKSKEGATNTVPYYKLFSFADSLDYL
LMSVGTISAIGNGVCMPLMTVIMGEVINSFGETTSINKVVGIVSKVALKYVYLALGAAAA
AFLQMSCWMITGERQAARIRSLYLKTILRQDVGFFDTEANTGEIVGRMSGDTVLIQEAMG
EKVGSFIQLVATFIGGFVIAFAKGWRLTLVMLTSIPPLILSGAVMSLTIRKLASRGQEAY
SVGATVVEQTIGSIRTVASFTGEKQAITKYNNSLTKAYKSGVQEGLASGLGLGMVVLVVF
CSYALAVWYGGKTILEQGYKAGDVMNVIFAVLTGSFSLGQASPCVSAFSAGQAASFKMFE
TINRKPDIDAYDTNGIESEDIRGDIELRDVSFSYPARPDEKIFHGFSISISSGATAALVG
QSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLKWIRQKIGLVSQEPVLFTCSIRDN
IGYGKDGATTEEIRAAAELANAAKFIDKLPQGLDTMVGEHGTQLSGGQKQRVAIARAILK
NPKILLLDEATSALDAESERAVQEALDRIMVSRTTVIVAHRLSTVRNADTIAVIHRGTIV
EQGPHAELVKDPDGAYSQLIRLQEISSVSEQNAQNDHEMPELSSSFQKFPSFRSISRGSS
GRGNSYRRSHSFSISHGAPTVTGVLEIETDIPASESSEVHPQVSLRRLAHLNKPEIPVLF
LGTIAAIVNGVTLPIFGVLISSIIKTFFEPPHQLRKDSKFWALIFIVLGVVSLLAHPMRA
YFFAVAGCKLIRRVRSLCFEKVVYMEVSWFDEADHSSGAIGTRLSANAASLRGMVGDALG
LAVMNTSTTIAGLVIAFVANWQLALIILVMLPLLGISGYFQVEFLKGLSANAKKMYEDAS
QVATDAVGSIRTVASFCAEEKVIKLYQTKCDGPIRSGIRQGIVSGIGFGLSFFLLYSVYA
CSFYAGARLVAAGKTTFPNVFRVFFALTMTAIALSQQSSLAPDASKGKSSAASIFAILDR
KSKIDSSDDSGTTIENMKGEIEFRHVSFKYPNRPNVPIFQDLCLTIHHGKTVALVGESGS
GKSTVISLLQRFYDPDSGQITLDGTEMQTLQLKWLRQQMGLVSQEPLLFNDTIRANIAYG
KEGEATEAEIIAAAELANAHKFISSLQQGYDTIVGERGVQLSGGQKQRVAIARAIMKAPK
ILLLDEATSALDAESERVVQDALDRVMVDRTTVVVAHRLSTIKGADLIAVVKNGVIAEKG
KHETLISIEGGTYASLVSLHASTSS
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcacgaagaacagtcagatggagatgtattaaaagagccggccatggcatca
acaaaggcagcagattccgaaaacaacaagcaggatactgcaggcaagagcaaggagggt
gcaaccaacacagtaccatattacaagctcttctcatttgctgattccctggattacctg
ttaatgtctgttggtacgatcagtgctatcggaaatggagtatgtatgcctctaatgacc
gtgatcatgggggaggtgatcaactcttttggagaaactacaagtatcaataaagtggtt
ggtatagtttccaaggtggctctcaagtacgtttacttggctctgggggctgctgctgct
gcatttttacaaatgtcttgctggatgatcactggagagagacaggcagcaagaataaga
agtttatacttgaaaacaatactaaggcaagacgttggcttttttgatacggaggctaac
actggggaaattgttggcaggatgtcgggggatactgtgctcattcaggaagcaatgggg
gagaaagtaggaagttttatccagttagttgctacattcataggaggctttgttatagca
tttgccaagggatggcgtctcacccttgtcatgctcacctctattccccctcttatctta
tccggtgctgtcatgagcctcactataaggaagttggcgtcccgtggacaagaggcatat
tcagttggcgcaactgttgtagagcagacaattggatctatcagaactgttgcatcattt
acgggggagaagcaagctataaccaagtacaacaactccttaactaaagcttacaagtct
ggtgtgcaagagggtttggcatcagggttgggtcttggtatggttgtgcttgttgtattc
tgcagttatgctttggctgtatggtatggcggaaaaacgatacttgaacagggatataaa
gcaggagatgtcatgaatgtgatttttgctgtattgaccggctctttctctcttgggcag
gcatctccatgcgtgagtgcattttctgctggacaagctgcatcatttaagatgtttgag
acaattaacagaaagccagatatagatgcttatgacactaatgggatagaatcagaagac
attcgtggagacatagaacttagggatgtttcttttagttatcctgcaagaccggatgaa
aaaatattccatggattctcaatctcaatatctagtggtgcaactgctgctttggttgga
cagagtggaagtggtaaatcgaccgtaattagtttgattgagagattttatgacccacag
gctggtgaagttcttattgacggtattaatctcaaagagttccagctgaaatggatcaga
cagaaaataggccttgtcagccaggaacctgttttgtttacttgcagcattagagataat
attggctatgggaaggatggcgcaactactgaagaaataagggctgctgctgagcttgcc
aatgctgcaaagttcatagacaaactacctcaggggctagatacaatggttggtgagcat
ggaactcagctatctgggggccaaaagcagagagttgctatagccagagcaattttaaag
aacccaaaaattcttcttttagatgaagcaacaagtgctcttgatgcagaatctgagaga
gctgtgcaagaggcattggacagaattatggttagtcggactactgtcattgtagcgcac
cgcttgagcacagtaaggaatgctgataccattgcagtgatacatcgtggaacaattgtt
gagcaaggaccacatgctgagctagttaaggatcctgatggtgcatatagccagcttata
aggttgcaagaaattagcagtgtgtccgaacagaatgctcaaaatgatcatgaaatgcca
gaactttcttcaagttttcaaaaatttccttcctttcgctctataagtcggggatcatct
ggaagaggaaatagttaccgccgcagccactcattctcaatctcacatggtgcacccact
gtgaccggtgtccttgaaatagaaactgatattccggcttcagaatcatcagaagtgcac
ccacaagtctcacttagacgcctggctcacctgaataagccagaaatcccagtgctattc
ctaggtactatagctgcaatagtcaatggggtaaccttgcctattttcggggtgttaata
tccagtataatcaagaccttctttgagccacctcatcaactccgaaaggattctaagttt
tgggcattaatatttattgttcttggagtggtgtctctcttggcacatccaatgagagca
tacttttttgctgtagctgggtgcaagttaataagacgagtccgttcactatgctttgag
aaggtggtttacatggaagtaagttggtttgatgaagctgatcactcgagtggtgcaatt
ggtacaaggctttcggcaaatgcagcttccctacgggggatggttggagatgctctaggt
ttggctgtcatgaatacttcaactacaattgccgggttggttattgcttttgtggcaaat
tggcaactcgctcttataatacttgttatgctgcccctactaggaataagtggatatttt
caagtcgagttcctgaaaggattaagtgcaaatgcaaagaaaatgtatgaagatgcaagc
caagtagccacggatgctgtggggagtattagaacagttgcttccttttgtgctgaagaa
aaggtgatcaagttgtaccagacaaaatgtgatggccctatcaggagtgggataagacaa
gggatagttagtggcataggctttgggctatcatttttcttgctttattctgtatatgca
tgcagtttttatgcgggggctcgacttgttgcagcaggcaagacaacatttcctaatgtt
tttcgggttttctttgctctcactatgacagctattgcattgtctcaacagagttcttta
gccccggatgcaagtaaaggaaagagctctgccgcttccatatttgcaattcttgaccgg
aaatccaagatagattcaagtgatgactccggaacaacaatagaaaatatgaagggagaa
attgagtttcgccatgttagtttcaaatatccgaatagacctaatgtgccaatctttcag
gatctttgcttgaccattcaccatggcaagacagttgctctggttggagagagtggaagt
gggaagtcgacagtgatctcattgttgcagcgcttttatgatcctgattcaggtcaaatt
acattagatggtacagaaatgcaaacattacagttgaagtggttgagacagcaaatgggg
ctggtgagtcaggagcccctattgtttaatgacacaatccgagccaacattgcatatgga
aaggaaggagaggcaactgaggctgaaattatagcagcagcagaattggcaaatgctcac
aagttcattagtagtttacaacagggttatgacacaatagtgggtgaacgaggggttcaa
ctttctggtggacagaagcaaagggtagctattgcaagagctataatgaaggcaccaaag
atattactactagatgaagccaccagtgctcttgatgctgaatccgaaagagtggttcag
gatgcactggatcgagttatggtggatcgaactacagtggtggttgcccatcggctatct
acaattaagggtgcagatttaatagcagtggtgaaaaatggagtcattgcagagaaagga
aagcatgaaactttgatcagtatcgagggtggaacttatgcttctttggtatcactacat
gcaagtacctcatcttag
DBGET
integrated database retrieval system
