Rosa chinensis (China rose): 112199683
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Entry
112199683 CDS
T06020
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00040
Pentose and glucuronate interconversions
rcn01100
Metabolic pathways
Module
rcn_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112199683
Enzymes [BR:
rcn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
112199683
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Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Pectate_lyase_4
Motif
Other DBs
NCBI-GeneID:
112199683
NCBI-ProteinID:
XP_024196429
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Position
4:complement(60065319..60074798)
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AA seq
386 aa
AA seq
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MVSTSAIQCACLVLLLVTINKVQAQSKVYNVLEHGAVADGKFDNSKVLSEVWNQSCHQNT
GGGVILFPQGTFMVAPVVLQGHCKGPMELQVQGTLQAPVDVQSSVGVDHWISFRYVEHFV
IHGGGLLDGRGASAWGKSKALPTTLRLDFVSHASIRQITFLNSKNTHIKIFTCSVVVISN
INISAPGDSPNTDGIKVSNSKYIQILDSVISVGDDCIACLPNSKNINITRVHCGPGHGFS
IGSISRGAVTNLNIRNSSLVGTQNGVRIKTKAYPSQPGNVAYITFEHIEMDNVGNPIIID
QNYCPDHGCSGKESSQVQIKNVKFNNIWGTSRTKTAVNFNCSQSKPCHEIELRDIDLNYR
DGGPANSSCSYVDGKAYGKQNPPSCL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggtctcgacctcggctatccaatgtgcttgcttagtgctattgcttgtaaccattaac
aaagttcaagctcagtccaaagtttacaatgtactggaacacggggccgttgcagatgga
aaatttgataacagcaaggtcttgagtgaagtatggaaccaatcctgtcatcaaaacact
ggaggtggtgttattttatttccacaagggacgttcatggtggcaccggtggttctacaa
gggcattgcaagggaccaatggagttgcaggtacagggaaccctacaagctcccgtggac
gtccaatcttcggttggtgtggaccattggatcagcttcagatatgttgaacacttcgta
attcatggtggtggattgttggacggccgaggagcctctgcttggggaaagagcaaggca
cttcccactacattgaggttagattttgtttctcatgcaagcatccgccaaataacattt
ctcaacagcaagaacacccacatcaaaattttcacatgcagtgttgtagtaattagcaac
atcaacatatcggctcccggcgacagtcccaacactgacggaatcaaagtaagtaattcc
aaatacatccaaatcttggattcagtgatatccgtaggggacgactgcatagcgtgcctt
cccaattcaaagaacatcaacataactagagttcactgtggacctggacatggatttagc
atcggaagcatttctcgtggtgctgttactaatttgaacataagaaacagcagtttagtt
ggtactcagaatggagtgagaatcaagacaaaggcttatccatctcagccaggcaacgtt
gcatatattacatttgagcacattgaaatggataatgtcggcaaccccatcatcattgat
caaaactattgccctgatcacggatgtagcgggaaggaatcctcacaagttcagattaaa
aatgttaagtttaataacatttggggaacttcaagaacaaagactgcagttaatttcaac
tgcagccaaagtaaaccttgccatgagattgagctgagagacatcgacctaaattataga
gacggaggacctgcgaattcgtcatgttcatatgtggatggcaaagcttatggcaaacaa
aaccctccttcttgcttataa
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