Rosa chinensis (China rose): 112200749
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Entry
112200749 CDS
T06020
Name
(RefSeq) ABC transporter B family member 3 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112200749
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rcn02000
]
112200749
04147 Exosome [BR:
rcn04147
]
112200749
04090 CD molecules [BR:
rcn04090
]
112200749
Enzymes [BR:
rcn01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
112200749
Transporters [BR:
rcn02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
112200749
Exosome [BR:
rcn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112200749
CD molecules [BR:
rcn04090
]
Proteins
112200749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_22
ABC_ATPase
Zeta_toxin
AAA_21
RsgA_GTPase
AAA_16
AAA_15
AAA_5
AAA_30
SbcC_Walker_B
G-alpha
AAA_7
4HB_MCP_1
Motif
Other DBs
NCBI-GeneID:
112200749
NCBI-ProteinID:
XP_024197523
LinkDB
All DBs
Position
4:complement(52555147..52561131)
Genome browser
AA seq
1289 aa
AA seq
DB search
MADQENHIDGDHDVIAEPGTASAVAADSKNNNQEDTGKSKEDATGSVPYYKLFSFADSMD
YLLMSVGTISAIGNGLCMPLMTVIMGEVINSFGETPNTKKVVGIVSKVALKYVYLALGAA
AAAFLQMSCWVITGERQAARIRSLYLKTILRQDVGFFDKEVTTGEIVGRISGDTVLIQEA
MGEKVGSIIQLVATFIGGFVIAFAKGWRLTLVMLTSIPPLVFSGAVLSFTVKRMTTRGQA
AYSVGATVVEQTIGSIRTVASFTGEKQAVTKYNNSLDKAYESGVQEGLASGFCLGAIVLI
VFCSYALAVWYGGKMILEQGYKAGDVMNVIFAVLTGSFSLGQASPCISAFSAGQAAAYKM
FETINRRPEIDASDTNGKQLEDIRGEIEFRDVYFSYPARPDEQIFQGFSLSISSGATAAL
VGQSGSGKSTIISLIERFYDPQAGEVLIDGINLKEFQLKWIRQKIGLVSQEPVLFTCSIK
DNITYGKDGATFEEIKAAAELANAAKFIDKLPQGLDTMVGEHGTQLSGGQKQRVAIARAI
LKNPRILLLDEATSALDAESERVVQEALDRVMVSRTTVIVAHRLSTVRNADTIAVINRGK
IVEQGPHSELVKVPDGAYSQLIRLQQISSVSEQNSQNVQEIRPLSNSRRDRSPRLSPLQS
ISRGSSGNTSPHSFSISHGAPTVIGVLEIAPTEPHILAASSELHPEVSLSRLAYLNKPEI
PVLILGTIAAAINGVILPIFGVLISSIIKTFFEPPHRLQKDSKFWSLIFILLGVASLLAY
PLKAYFFAVAGGKLIRRVRSLCFEKVIHMEVSWFDEAEHSSGAIGARLSADAASLRGLVG
DALGLAVLNGSTAIAGLVIAFVANWQLALIILILLPLLGISGYFQVQFLKGLSASAKKMY
EDASQLATDAVGNIRTIASFCAEEKVIKLYHTKCEGPIKAGIRQGIVSGIGFGLSFFLLF
SVYACSFYAGAQLVGAGKTTFPDVFRVFFALTMTAIALSHQGSVAPDSIKGKSAAASIFA
LLDQKSKIDSSDDSGTTIVNVKGEIQFRHVSFRYPNRPNVPIFRDLCLTIHHGKTLALVG
ESGSGKSTVISLLQRFYDPDSGHITLDSVEMKTLQLKWLRQQMGLVSQEPLLFNDTIRAN
IAYGKEGIATEAEIIAAAELANVHKFISSLQQGYDTIVGERGVQLSGGQKQRVAIARAIM
KAPKILLLDEATSALDAESERVVQDALDRVMLDRTTVVVAHRLSTIKGADLIAVVKNGVI
AEKGKHESLINIKGGTYASLAALHASASS
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcaggaaaaccatatcgatggagatcatgatgtaattgcagagccaggcacg
gcatcagcagtggccgcagattcgaagaataataaccaagaggatacaggcaagagcaag
gaggatgcaaccggttcagtaccatattacaagctcttctcctttgctgattctatggat
tacctgttaatgtctgttggtacgatcagtgctattggaaacggattatgtatgcctcta
atgactgtgatcatgggagaagtgattaactctttcggagaaactccgaataccaaaaaa
gtggttggtatagtctccaaggttgctctaaaatatgtttacttggctttgggggctgca
gcagctgcatttttacagatgtcttgctgggtgatcaccggagagagacaggcggcacga
ataagaagtttatacttgaagacaatcctaaggcaagatgttggttttttcgataaagaa
gttaccaccggggaaatagttggaagaatttcaggtgatactgtgctcattcaagaggcc
atgggcgagaaagtaggaagtattatccagttagttgcaacattcataggaggctttgtc
atagcatttgctaagggatggcgtctcacccttgtcatgctgacctctattccccctctt
gttttctccggtgctgtattgagcttcactgtaaagaggatgactactcgtggacaagct
gcttattcagtgggagcaactgtggtagagcagacaattggttcaatcagaactgttgca
tcatttacaggtgagaagcaagctgtaacaaagtacaacaactcattagacaaagcttac
gagtctggagtgcaagaaggtttggcatcagggttttgtcttggcgcgattgtgcttatt
gtattctgcagctatgctttggcagtatggtatggcggaaaaatgatacttgaacaagga
tataaagcaggagatgtcatgaatgtgatatttgcagtattaactggctccttctctctc
ggacaagcatctccatgcataagtgcattttcggctggacaagctgcagcttacaagatg
tttgagacaattaacagaaggccggagatagatgcttctgatactaatgggaagcaatta
gaagacatccgaggggaaatagaatttagggatgtttattttagttatcctgcaagacca
gatgaacaaatattccaaggattctcactctcaatatctagtggtgcaactgctgctctg
gtaggacagagcggaagcggtaaatcgactataatcagtttgattgagagattttatgac
ccacaggcaggtgaagttcttatcgatggcattaatctcaaagagttccagctgaaatgg
atcagacaaaaaatagggcttgtcagccaggaacctgttttgtttacttgcagcattaaa
gataatattacctatgggaaggatggagcaacttttgaagaaataaaggctgccgctgag
cttgccaatgctgctaaattcatagacaaattacctcagggtctagatacaatggttggg
gagcatggaactcagctatctgggggccaaaagcagagagttgccatagctagagcaatc
cttaagaaccctagaattctgcttttagatgaagctacaagtgctcttgatgcagaatct
gagagggttgtgcaagaggcattggacagagttatggttagccggactacagtgattgta
gcccaccgcttgagcacagtgaggaatgctgatacgattgcagttataaatcgcggaaaa
attgttgaacaaggaccacattctgaactagttaaggttcctgatggagcatatagccag
cttataaggttgcaacaaattagcagtgtgtcagaacagaactctcaaaatgttcaggaa
attaggccattgtcaaactctagaagagatagaagtccaagactttctcccttacaatcc
ataagtcgaggatcatctggaaatactagtccccactcattctcaatctcacatggtgcg
cctactgtaataggtgtgcttgaaatagcaccaactgaacctcacattctagctgcatca
tcagaactgcatccagaagtctcacttagccgcctagcttacctgaacaagccagaaatc
ccagtgctaattctaggtactatagctgcagcaattaatggcgtaatattgcctattttt
ggggtgttaatatccagtataatcaagacattctttgagccacctcatcgacttcaaaag
gattccaagttttggtcattaatctttattcttcttggagtggcatctctcttggcatat
ccattgaaagcatacttttttgctgtggctgggggcaagttaataagacgagttcgatca
ctatgctttgagaaggtgattcacatggaagtaagttggttcgatgaagctgagcactca
agtggtgcaattggtgcaaggctttctgcagatgctgcctctctccgagggcttgttgga
gatgctctaggtttggctgttttgaatggatcaactgcaattgctggattggttattgct
tttgtggcaaattggcaacttgctcttataatccttattctcctacctctactaggaata
agtggatatttccaggtccagttcctgaaaggattaagcgctagtgcaaagaaaatgtat
gaagacgcaagccaattagccacagatgctgtggggaatattagaacaattgcttcattt
tgtgctgaagaaaaggttatcaagttgtaccacacaaaatgtgaaggtcctatcaaggca
gggataagacaagggatagtcagtgggataggctttggactatcgttcttcttgctcttc
tctgtatatgcatgtagtttctatgctggtgctcaacttgtaggagcaggcaagacaaca
ttccctgatgtttttcgggttttctttgctctaactatgacagctatagcattgtctcac
cagggttccgttgcccctgattcaattaaaggaaagagcgctgccgcttctatatttgca
cttcttgaccaaaaatcaaaaatagattctagtgatgactctggaacaaccattgtaaat
gtgaaaggagaaatccaatttcgtcatgttagtttcaggtatcctaatagacctaacgtg
ccaatcttccgggatctttgcttgaccattcaccatggcaagacacttgctctggtggga
gaaagtggaagtggaaaatcgacagtgatctcattgcttcagagattttatgaccctgat
tcaggtcatattacattagatagtgttgaaatgaaaactttacagttgaagtggctgaga
cagcaaatggggttggtgagccaggagcctctattgtttaatgacactataagagccaac
attgcatatggaaaggaagggattgcaaccgaggctgaaattatagctgcagcagaattg
gcaaatgtccacaagttcattagtagtttacaacagggttatgatacaatagtgggcgag
cgaggggttcaactgtctggtggacagaagcaaagggtggctattgcaagagcgataatg
aaggcaccaaagatattactactagatgaagccactagtgctcttgatgctgaatccgaa
cgagtggttcaagatgcactagatcgagttatgttggatagaaccacagttgtggttgcg
catcgtttatccacgattaagggtgcagatttaatagcagtggtgaaaaatggagtaatt
gcagagaaaggtaagcatgaatctttgatcaatatcaagggtggcacttatgcttctttg
gcagcattacatgcaagtgcctcatcttag
DBGET
integrated database retrieval system
