Rosa chinensis (China rose): 112201987
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Entry
112201987 CDS
T06020
Name
(RefSeq) probable GMP synthase [glutamine-hydrolyzing]
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
112201987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcn03400
]
112201987
Enzymes [BR:
rcn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
112201987
DNA repair and recombination proteins [BR:
rcn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
112201987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Paramyxo_P_V_N
Motif
Other DBs
NCBI-GeneID:
112201987
NCBI-ProteinID:
XP_024198679
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All DBs
Position
5:15936507..15938816
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AA seq
376 aa
AA seq
DB search
MCSSKPKLQQNPSVTPTTPKTNRRLVLQPTGNQFPSLEQKKFLKKTSHESLIPPPLLSPL
PSPKTKPAISPPISPKLPSPRPPALKRGKDHNELNSSLEKVILTPKSTTKLTSSVKKSKR
SSVAGAASAENVMKNISSLIVEAPGSIAAARREQVATMQEQRKLRIAHYGRTKSAKFEGK
AVPLDTSSTNVEQRRCSFITPNSDPLYVAYHDQEWGVPVHDDNLLLELLLLTSAQVGSDW
SSVLRKRQALREAFSGFDAEIVAKFNEKKITSVSADTGTDISLIRGVVDNAKRILEIKRE
TGSFNNYLWGFVNHKPISTQYKSCHKIPVKTSKSESISKAMVKKGFRFVGPTVIHSFMQA
AGLTNDHLITCSRHQL
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgtgttcctctaaaccaaaattgcagcaaaatcctagtgttactccaacaacacctaaa
accaatcgtcgtttggttcttcagccaactggtaaccaatttccaagcttggaacaaaag
aagtttctcaaaaagacctcccatgaatcccttattccacctcctttgctatcaccactg
ccatcaccgaaaactaagcccgcaatttctcctcccatctctcccaagttaccttcgcct
cgaccaccagcacttaagagaggaaaagaccataatgagctcaattctagtcttgagaag
gtaattctcacacctaagtcaacaaccaagttgactagttcagtgaaaaagtcaaagaga
tcaagtgttgcaggtgcagcttctgctgaaaatgtaatgaaaaatatatcatctttgata
gtagaggcaccaggaagcatagcagctgcaaggagagagcaagttgcaacaatgcaagaa
caacgaaagttgagaattgcgcattatggaagaacaaagtctgcaaagtttgaagggaaa
gcagtgcctcttgatacttcatccaccaatgttgaacaaaggagatgcagttttatcaca
ccaaattcagaccctctgtatgttgcttaccatgatcaagaatggggagttcctgttcac
gatgacaatttgttgcttgaattgctcctgctgaccagtgctcaagtaggatcagattgg
agctcggtcctgaggaaaaggcaggctttgagggaggcattttcaggttttgatgcagaa
attgtggctaagtttaatgaaaagaagataacttcagtaagtgctgatactggtactgat
ataagcttgatcagaggagttgttgacaatgctaaaagaattcttgagattaaaagggaa
actgggtcatttaacaactacttgtggggatttgtgaatcacaagccaatttccacccag
tacaagtcatgccacaagatccctgtgaagacctccaaatcagagtccataagcaaagcc
atggtgaagaagggtttcaggtttgtgggccccactgtgattcactccttcatgcaagct
gctggcctcactaatgaccacttgatcacttgctcaaggcaccaactatag
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