Rhodobacter capsulatus: RCAP_rcc01384
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Entry
RCAP_rcc01384 CDS
T01213
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
rcp
Rhodobacter capsulatus
Pathway
rcp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rcp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RCAP_rcc01384 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcp03400
]
RCAP_rcc01384 (uvrB)
DNA repair and recombination proteins [BR:
rcp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RCAP_rcc01384 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RCAP_rcc01384 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_19
Kinesin
AAA_22
TrwB_AAD_bind
AAA_5
DUF87
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ADE85130
UniProt:
D5AT23
LinkDB
All DBs
Position
complement(1491744..1493927)
Genome browser
AA seq
727 aa
AA seq
DB search
MPHNNTDRPTPRPEVLTRPKLEGGKRFVMKSEFSPAGDQPTAIAEISKAVLAGERDQVLL
GATGTGKTYTMAKVIEATQRPAIILAPNKTLAAQLYGEFKGFFPDNAVEYFVSYYDYYQP
EAYVARTDTYIEKESMINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSVETYSAMT
QDLSVGGLYESRKFLADLVAQQYKRLDAAFQRGSFRVKGDTVDLWPAHLEDRAWRFSFFG
EELEAIIEFDPLTGARTDSFQQIRIYANSHYVTRRPTLQQATKSIRIELAQRLKQLHDEG
KLLEAQRLEQRTNFDLEMLEATGVCNGIENYSRYLTGRAPGEPPPTLFEFIPDTAIVFAD
ESHVTVPQIGGMYRGDYRRKFTLAEHGFRLPSCMDNRPLKFEEWDAMRPQSVFVSATPAP
WELEQTGGVFTEQVIRPTGLLDPEVEIRPVETQVDDLLDEIRKVAARGLRVLVTTLTKRM
AEDLTEYLHEQGIRVRYMHSDIDTIERIEILRDLRLGAFDVLIGINLLREGLDIPECGLV
AILDADKEGFLRSETSLIQTIGRAARNADGRVIMYADRITGSMQRALNETNRRREKQIAY
NLEHGITPQTVRKNVEDVLAGLWAGDTDMARVTAKVEGPAVGSNLAAHLEALRTKMRKAA
ENLEFEEAARLRDEVKRLEAVELAVADDPLARQSAVEEAVEAATQAKGRSTAGRPGQRGG
VKGPKKR
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgccccacaacaacaccgaccgccccaccccgcgccccgaggttctgacccgtccgaag
cttgagggcggcaagcgattcgtgatgaagagcgaattttcccccgcgggcgaccagccg
acggcgattgcggagatctcgaaagccgtgctggcgggcgagcgcgatcaggtgcttttg
ggcgccaccggcaccggcaagacctatacgatggccaaggtgatcgaggcgacgcagcgc
ccggcgatcatccttgcccccaacaaaaccctggccgcgcaattatacggcgaattcaag
ggcttctttcccgacaacgcggtcgagtatttcgtgtcctattacgattactaccagccc
gaggcctatgtcgcccgcaccgacacctatatcgagaaggaatcgatgatcaacgaacag
atcgaccggatgcgccactcggccacccgggcgcttctggaacgcgacgacgtgatcatc
gtcgcctcggtcagctgcatctatggcatcggctcggtcgagacctattcggcgatgacc
caggatctgagcgtcggcggcctgtacgagagccgcaagttcctcgccgatctggtggcg
cagcaatacaagcgcctcgatgccgcctttcagcgcggttcgttccgggtcaagggcgac
accgtcgatctctggcccgcccacctggaggaccgcgcctggcggttttccttcttcggc
gaggagctggaggcgatcatcgaattcgacccgctcaccggcgccaggaccgacagtttc
cagcagatccgcatctatgcgaacagccactacgtcacccgccgccccaccctgcagcag
gcgacgaaatcgatccggatcgagctggcacagcggctcaagcagctccatgacgagggc
aagctgctcgaggcgcaacggctggaacagcgcaccaacttcgatctggaaatgctcgag
gcgaccggcgtctgcaacggcatcgagaattactcgcgctatctgaccggccgcgccccg
ggcgagccgccgccgacgctgttcgaattcatccccgacaccgccatcgtctttgccgat
gaaagccacgtcaccgtgccgcagatcggcggcatgtatcgcggcgactaccggcgcaag
ttcacgctggccgaacatggcttccggctgccctcctgcatggacaaccggccgctgaaa
ttcgaggaatgggatgcgatgcggccgcaatcggtcttcgtctcggccacgcctgcgccc
tgggagctggaacagaccggcggcgtcttcaccgaacaggtgatccggccgacggggctt
ttggacccggaggtggaaatccgcccggtcgagacgcaagtggatgatctgctggacgaa
atccgcaaggtcgcggcgcgggggctgcgcgttctggtgacgacgctgaccaagcgcatg
gccgaggatctgaccgaatatctgcacgaacagggcatccgggtgcgctacatgcattcc
gacatcgacacgatcgagcggatcgagatcctgcgcgatctgcgtctgggcgcctttgac
gtgctgatcggcatcaaccttctgcgcgaggggctcgatattcccgaatgcgggctggtg
gcgattctcgatgccgacaaggaggggttcctgcgctcggaaacctcgctgatccagacc
atcgggcgggcggcgcggaacgccgacgggcgggtgatcatgtatgccgaccgcatcacc
gggtccatgcaacgggcgctgaacgaaaccaaccggcggcgcgaaaagcagatcgcctac
aacctggaacacgggatcacgccgcagaccgtgcgcaagaatgtcgaggacgtgctggcc
gggctttgggcgggcgacaccgacatggcgcgcgtcaccgccaaggtggaggggccggcg
gtcggttcgaaccttgcggcgcatctggaggccctgcgcacgaagatgcgcaaggcggcc
gagaacctcgaattcgaagaggcggcccggctgcgcgacgaggtgaagcggctcgaagcg
gtggagctggcggtggccgacgatccgctggcgcggcaatcggcggtcgaagaggcggtc
gaggccgcgacccaggccaagggccgctccaccgccgggcggccggggcagcgcggcggg
gtgaaggggccgaagaagcgctag
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