Rhodococcus coprophilus: NCTC10994_01033
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Entry
NCTC10994_01033 CDS
T06666
Symbol
ligB
Name
(GenBank) ATP-dependent DNA ligase
Organism
rcr
Rhodococcus coprophilus
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
SQI29478
UniProt:
A0A2X4U320
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Position
1:1120916..1122550
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AA seq
544 aa
AA seq
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MRPAEVQPSSRVVHHPASFSGAAAAPPRYRRRVLLESVVETSEAVAGTRSRRAKTEALRG
LLVRADPTEVESVVSWLSGELSQGRIGVGFRTLAGLDPAPAPSASLEVSEVSAILDALAN
TTGRGSAAARRARLEALFSRATAGEQRFLVRLLGGDLRQGALEGVMTDAVAAAAGLPIEP
VRRAFMLSGRLSATAVAAFEGGLDALAAFRLEVGRPVRPMLASPAESLASALTELDGGVS
VEYKLDGARIQVHRAGDQVWVFTRTLRDITGSVPELVDLVAGLPCTSVVLDGETLALTDS
GRPRPFQETMSRFGARSERELLLHPYFFDCLHLDGADLLDVPLSDRLTALDRVASAHRIP
AVASPLPDLAQEHLAASLDHGHEGVMVKSLTSLYSAGRRGRAWQKVKPEHTLDLVVLGAE
WGYGRRTGYLSNLHLGARDPDGGPPIMVGKTFKGLTDELLRWQTGEFPLHESHRDAHTVY
LEPRLVVEIELDGAQVSTRYPGGVALRFARVLRYRPDKSAADADTIDAVRALLPGSHVRS
DGLP
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
gtgcgccccgccgaggtgcaaccatcctcgcgcgtcgtgcaccaccccgcatcgttttcc
ggcgccgccgcagcgccgccgcgttaccgtcgtcgtgtgctgctcgagagcgtggttgag
acatcggaggcggtcgccgggacgcgctctcggcgcgcgaagaccgaagccctccgcggc
ttgctcgtccgcgccgaccccaccgaagtcgagtcggtggtgtcgtggctgtcgggagag
ctgtcgcaggggcgcatcggcgtcgggttccgcacgcttgcggggctcgacccggccccc
gcgccgtcggcgtcactcgaggtttccgaggtttccgcgatcctcgacgccctcgcgaac
accacgggccggggttcggccgcggcacgacgcgctcggctcgaggcgttgttctcacgc
gcgaccgcgggagaacagcggtttctcgtgcgcctgctcggcggggatctgcggcagggc
gccctcgaaggcgtgatgaccgacgccgtggccgctgcggcgggactgccgatcgaaccg
gtgcggcgagcgttcatgctctccggccggctcagcgcgactgcggtggctgcgttcgag
ggcggtctcgacgcgcttgcggcgttccgcctcgaggtgggccggccggtccggcccatg
ctggcctcccccgcggaatccctcgcctcggcactcaccgagctcgacggtggggtgagc
gtggaatacaaactcgacggtgcgcgcatccaggtgcaccgtgccggagatcaggtgtgg
gtgttcactcgcacgctgcgcgacatcaccggatccgtcccggaactggtggacctcgtc
gccggcctgccgtgcaccagtgtggtgctcgacggggaaacgctcgccctgaccgattcc
gggcgtccacggccgttccaggagaccatgagccgcttcggcgcacgcagcgagcgcgaa
ctgctgctgcatccgtacttcttcgactgtctgcatctcgacggagcggatctcctcgac
gttcccctctccgatcggctcaccgcgctcgaccgtgtcgcctccgcacaccggataccg
gccgtggcatctccgctgccggacctcgcccaggagcacctcgcggcgtcgctcgaccac
gggcacgaaggcgtcatggtgaagtccctcacgtccctctacagcgcagggcggcgcgga
cgggcgtggcagaaggtcaagccggagcacacgctcgatctggtggtgctcggcgccgaa
tggggttacggacggcggaccgggtatctgtcgaacctgcacctgggggcgcgcgatccc
gacggcgggccgcccatcatggtgggaaagacgttcaagggtctcaccgacgagttgttg
cgctggcagacaggcgaattccctctccacgagtcgcaccgcgacgcgcacaccgtctat
ctcgagccgagactggtggtggagatcgaactcgacggcgcccaggtcagtacccggtac
cccggcggcgtggcactgcggttcgcgcgggttctgcgctaccgccccgacaaatctgcg
gcggacgccgacacgatcgacgcggtgcgcgcgctgctccccggctcccacgtccgcagc
gacggcctaccgtag
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