Rhodococcus coprophilus: NCTC10994_03576
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Entry
NCTC10994_03576 CDS
T06666
Symbol
hemD
Name
(GenBank) uroporphyrinogen-III synthase
KO
K13542
uroporphyrinogen III methyltransferase / synthase [EC:
2.1.1.107
4.2.1.75
]
Organism
rcr
Rhodococcus coprophilus
Pathway
rcr00860
Porphyrin metabolism
rcr01100
Metabolic pathways
rcr01110
Biosynthesis of secondary metabolites
rcr01120
Microbial metabolism in diverse environments
rcr01240
Biosynthesis of cofactors
Module
rcr_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
rcr_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
rcr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
NCTC10994_03576 (hemD)
Enzymes [BR:
rcr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.107 uroporphyrinogen-III C-methyltransferase
NCTC10994_03576 (hemD)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
NCTC10994_03576 (hemD)
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Gene cluster
GFIT
Motif
Pfam:
HEM4
TP_methylase
Motif
Other DBs
NCBI-ProteinID:
SQI37309
UniProt:
A0A2X4UF68
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Position
1:3847143..3848708
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AA seq
521 aa
AA seq
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MSRVRKNTPGRILFVGSGPGDPALLTVRAHDVLTGATIAFTDPDVDKGVVALVGTDHGND
PETGEPIAEVRPALGEPAEVAKTLVAEAKAGRDVVRLVAGDPLTTDSVIAEVNAVARTQV
VFEVLPGLPAGSSVPSYAGMALGSCHTEVDVRGEVDWAALAAAPGPLVLHATSGHLAETA
SALVEHGLAPQTPAAITVRGTTRQQRTVEATLATLNDAGSELVGSLVVTVGKVVSQRNKM
SWWESRALYGWTVLVPRTKEQAGEMSDRLVTHGAIPMEVPTIAVEPPRSPAQMERAVKGL
VDGRYQWVVFTSTNAVRAVWEKFEAFGLDARAFSGVKIACVGQATADKVRSFGIIPELVP
SGEQSSEGLLAEFAPYDDVFDPVNRVLLPRADIATETLAEGLRERGWEIDDVTAYRTVRA
APPPASTREMIKTGGFDAVCFTSSSTVRNLVGIAGKPHARTIVACIGPKTAETAIEFGLR
VDVQPETAQVGPLVEALAEHAARLRSEGALPPPRKKSRARR
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgagccgagtccgtaagaacacccccggacggatcctgttcgtgggatcgggaccgggt
gatccggcactgctcaccgtgcgcgcgcacgacgtgctcacgggtgccaccatcgccttc
accgaccccgatgtcgacaagggcgtcgtcgcgctcgtcgggaccgatcacggcaacgat
ccggagaccggcgagccgatcgccgaggtccggcccgcactcggtgagccggccgaggtt
gccaagacgctcgtcgcggaagccaaggcgggacgcgacgtcgtgcgcttggtcgccggc
gacccgctgacgaccgattcggtgatcgccgaggtcaatgcggttgcccgtacccaggtc
gtcttcgaggtcctgccgggtctgcccgccgggtcgtcggtgccgagctacgcgggcatg
gccctggggtcgtgccacaccgaggtcgacgtgcgcggcgaggtcgactgggctgcgctc
gccgcggctcccggtccgctcgtgctgcacgccacctcgggtcatctggccgagaccgcg
agcgcgctcgtcgagcacggactggcgccgcagacaccggccgccatcaccgtgcgcggc
accacccgtcagcagcgcaccgtcgaggcgaccctcgcgacactcaacgacgcgggttcc
gaactcgtcgggtcgctggtcgtgaccgtcggcaaggtggtctcgcagcgcaacaagatg
tcgtggtgggagtcgcgcgccctgtacggctggaccgtgctggtgccgcgcaccaaggaa
caggccggggagatgagcgatcgtctcgtcacgcacggcgccattccgatggaggtgccg
acgatcgcggtcgagccgccgcgcagccccgcgcagatggaacgcgcggtcaagggactc
gtcgacggccgctaccagtgggtggtgttcacctcgaccaacgcggtgcgcgcggtgtgg
gagaagttcgaggcgttcggcctcgacgcgcgcgcgttctcgggtgtgaagatcgcgtgc
gtcggtcaggcgaccgccgacaaggtgcgttcgttcggcatcatccccgaactggttccg
agcggtgagcagtccagcgagggtctgctggccgagttcgcgccctacgacgacgtgttc
gatcccgtgaaccgggtgctgttgccgcgagccgacattgcgaccgagaccctcgccgag
ggacttcgcgaacgcggctgggagatcgacgacgtcaccgcctaccgcaccgtgcgggcg
gcgccgccgccggcttcgacccgcgagatgatcaagaccggcgggttcgacgcggtgtgc
ttcacgtcgtcgtccacggtccgcaacctcgtgggtatcgcaggaaagccccacgcgcgc
accatcgtcgcgtgcatcggcccgaagacggccgagaccgcgatcgagttcggactgcgc
gtcgacgtgcagcccgagacggcgcaggtgggtccgctggtcgaggctctggcggagcac
gcggcccggttgcgctccgagggtgcgctgcctccgccgcggaagaagtcccgagcccgg
cgctga
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