Rhizobium croatiense: PYR68_05885
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Entry
PYR68_05885 CDS
T09286
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
rct
Rhizobium croatiense
Pathway
rct00521
Streptomycin biosynthesis
rct00523
Polyketide sugar unit biosynthesis
rct00541
O-Antigen nucleotide sugar biosynthesis
rct01100
Metabolic pathways
rct01110
Biosynthesis of secondary metabolites
rct01250
Biosynthesis of nucleotide sugars
Module
rct_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
rct00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
PYR68_05885 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PYR68_05885 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PYR68_05885 (rfbC)
Enzymes [BR:
rct01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
PYR68_05885 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
WET75043
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Position
complement(1185424..1186002)
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AA seq
192 aa
AA seq
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MHIETAAIEGIVAITPPRFGDHRGYFSEVFKDAWFRENVADVTFVQDNESLSAQAGTVRG
LHFQIPPFAQGKLVRCLAGRIMDVVVDIRVGSPSFGKWLSQELSPDTGKQLWIPPGFAHG
FATIEPNSVISYKVTAPYSPQHDRGIAWNDPAIGIRWPFDERDIVSSDKDKTLPRLADLP
SHFSYSAQQPQD
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgcacattgagaccgccgccatcgagggcatcgttgcaatcacgccgccacgttttggc
gatcaccgcggctacttctccgaagtattcaaggatgcgtggttccgggaaaatgtggcc
gacgtcacgttcgtccaggacaatgaatcgctttcggcgcaggccggaaccgtccggggg
ctgcatttccagataccgcccttcgcacagggcaagcttgtgcgctgccttgccggccgg
atcatggatgtcgtcgtcgacatccgcgtgggatcaccgagcttcggcaaatggctctct
caggagctctcgccggacaccggcaaacagctctggataccgcccggcttcgcacacgga
ttcgcaacgatcgagccgaacagcgtcatcagctacaaggtaaccgcaccctatagcccg
cagcatgatcggggcatcgcgtggaacgatccggcgatcggcattcgctggcccttcgat
gagagagacatcgtatcgtccgacaaggacaagacgctgccgcggctcgccgatctgcca
agccatttttcctattcagcacagcaaccccaggattga
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