KEGG   Ricinus communis (castor bean): 8262560
Entry
8262560           CDS       T01087                                 
Name
(RefSeq) survival of motor neuron-related-splicing factor 30 isoform X1
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    8262560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rcu03041]
    8262560
Spliceosome [BR:rcu03041]
 Complex A
  U2 snRNP components
   U2 related factors
    8262560
 Complex B
    8262560
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    8262560
SSDB
Motif
Pfam: SMN_Tudor TUDOR SGF29_Tudor Wtap CHASE3
Other DBs
NCBI-GeneID: 8262560
NCBI-ProteinID: XP_048231785
LinkDB
Position
6:complement(17077185..17081476)
AA seq 292 aa
MQGGEEVSIEELASNLSTYKQQLHQVRELLVDDPYNSEYADMEKELKEVIALTEELLATA
KQNEIPGSDIGTGTSESPILPQPKVSTSISDEHEKFPIGAKVQAVYSEDGEWYDATIEGH
TPNGYFVSYDEWGNKEEVDPANVRLIEFNALLEAEKVAEATKQAIKRKIAQAASVDFQSR
SLPAKLRINPDDTEEVKAAKRKKIHSFKSKMRFEQLEVVQNKRQNAWQQFQTTKGSSKKI
GFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQRREKHLHLKGGVAETDD
NT seq 879 nt   +upstreamnt  +downstreamnt
atgcaaggtggagaagaagtaagcatagaagagctcgcttccaatctctccacttacaaa
caacagcttcatcaggttagagagcttttagttgatgatccttataattctgagtatgcg
gacatggagaaggagcttaaggaggtcattgctctaactgaggagctccttgcaactgca
aagcagaatgagattcctggatcagatattgggacaggaactagtgaatcccctattttg
ccccaacctaaggtatcgacaagcatctctgatgaacatgagaagttccctattggtgca
aaagttcaagctgtatatagtgaagatggggagtggtatgatgcaacgattgaggggcat
actccaaatggatattttgtttcctatgatgagtgggggaataaggaagaggtggatcct
gccaatgtaagactgatagagttcaatgctttactggaagctgaaaaagttgctgaagct
acaaaacaagctatcaaaaggaagattgcacaagctgcttccgttgactttcagtcccga
agtttgccagcaaagcttcgtataaatccagatgacacagaggaagtgaaagctgccaag
cgaaagaagatacattcttttaaatcgaaaatgcgttttgagcaactggaggttgtacag
aataagcggcaaaatgcatggcagcagttccagactactaaaggcagctctaaaaagatt
ggtttcttctcagggcgcaagcgagagagtattttcaagtctcctgacgaccccaatggt
aaggttggtgtgactggaagtgggaaaggattgacggagttccagaggagggagaagcac
ttgcatctcaaaggtggagttgctgaaactgatgattag

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