Ricinus communis (castor bean): 8265880
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Entry
8265880 CDS
T01087
Name
(RefSeq) ABC transporter B family member 4-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
8265880
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rcu02000
]
8265880
04147 Exosome [BR:
rcu04147
]
8265880
04090 CD molecules [BR:
rcu04090
]
8265880
Enzymes [BR:
rcu01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
8265880
Transporters [BR:
rcu02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
8265880
Exosome [BR:
rcu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
8265880
CD molecules [BR:
rcu04090
]
Proteins
8265880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
AAA_22
RsgA_GTPase
AAA_16
AAA_21
Zeta_toxin
AAA_15
AAA_30
DUF815
DEAD
AAA_24
AAA_7
DLIC
Sigma54_activ_2
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
8265880
NCBI-ProteinID:
XP_048227950
LinkDB
All DBs
Position
1:9145938..9152789
Genome browser
AA seq
1294 aa
AA seq
DB search
MDKENGLNGNTSTHEAGTSKSHEEEKEKKSSTNGLPQDTEKSKGDEKTNSVPFHKLFSFA
DSKDVILMIIGTIAAIGNGLALPLMTIVLGDIIDAFGQNQNQDVVKVVSKVSLRFVYLAI
GAAAASFLQVACWMVTGERQAARIRALYLKTILRQDIAFFDKETNTGEVIGRMSGDTVLI
QDAMGEKVGKFIQLVSTFLGGFVIAFVKGWLLTFVMLSSIPLLVIAGGVMSITISKMASR
GQTAYAKAATVVEQTIGSIRTVASFTGEKQAISNYKKFLVTAYNSGVHEGIATGVGLGVL
MLVVFCSYSLAIWFGGKMILEKGYTGGQVLNVIIAVLSGSMSLGQASPCMSAFAAGQAAA
YKMFETISRMPEIDAYDTRGKILEDIRGDIELRDVYFSYPARPEEQIFSGFSLSIPSGTT
TALVGQSGSGKSTVISLIERFYDPQAGEVRIDGINLKEFQLKWIREKIGLVSQEPVLFTA
SIRDNIAYGKDGATTEEIRSAAELANAAKFIDKLPQGLDTMAGEHGTQLSGGQKQRIAIA
RAILKDPRILLLDEATSALDAESERVVQEALDRIMVNRTTVIVAHRLSTIRNADVIAVIH
RGKMVEKGSHSELLMDPDGAYSQLIRLQEVNKDSEQKPEDHKRSDLSSESFRQSSQRISL
RRSISRGSSGVGNSSRHSFSVSFGLPTGINATDNPQEEPTDSPSPENTPEVPIRRLAYLN
KPEIPVLIFGAIAACANGVIFPIYGILLSRVIKSFYEPPHELRKDTNFWALIFMTLGLAS
FVVIPLQFYFFGVAGSRLIQRIRTICFEKVVHMEVGWFDEPEHSSGAIGARLSADAATVR
ALVGDSLAQMVQNLASAVAGLVIAFTASWQLAFIILALIPLIGVTGYVQVKFMQGFSADA
KMMYEEASQVANDAVGSIRTVASFCAEEKVMQMYKKKCEGPMKTGIRQGVISGMGFGASF
FLLFSVYATSFYAGAQLVKHGKTSFSDVFQVFFALTMAAMGISQSSSLAPDSSKARSAVA
SIFSIIDRQSKIDPSDESGMTIENVRGEIELRRVSFRYPSRPDIQIFRDLNLAIHSGKTV
ALVGESGSGKSTVISLLQRFYDPDSGHITLDGVEIQRLQLKWLRQQMGLVSQEPVLFNDT
IRANIAYGKDGDATEAETLAASELANAHKFISSLQQGYDTLVGERGVQLSGGQKQRVAIA
RAIVKSPKILLLDEATSALDAESERVVQDALDRVMVNRTTIVVAHRLSTIQNADVIAVVK
NGVIVEKGKHETLINIKDGFYASLVSLHTTASTA
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagagaatggcctgaatggcaataccagtacccatgaagccggcacctcaaaa
agccatgaagaggagaaagagaagaaatccagcacaaatgggctaccacaagatacggag
aagagcaaaggagatgaaaagaccaactcagttccatttcacaagctcttttcatttgca
gattccaaagatgtaattttgatgattattggcacaattgctgctattgggaatggatta
gctctgccccttatgacgattgttcttggggatattattgatgcctttggacaaaaccag
aatcaagatgtggttaaagtagtttccaaggtgtccctaagatttgtctacttagcaata
ggtgcagcagcagcatcatttctccaggtggcttgttggatggtcacaggagagagacag
gctgcaagaatcagggctttatatttgaaaaccatattgagacaagatattgctttcttt
gataaggaaacaaacaccggagaggtcattggcagaatgtccggtgacactgttcttata
caagatgctatgggagagaaggttgggaaatttatacagctcgtatccacattcttggga
ggatttgttatagcatttgtcaaagggtggttacttaccttcgtcatgttatcctctatc
cccctgctagtgatagctggtggagtgatgtctatcacaatatctaagatggcatcccgc
ggacaaactgcttatgcaaaagccgcaactgtagtcgagcagactattggatcaattaga
actgttgcatcttttactggggaaaagcaagccataagtaactacaagaagtttctcgtt
actgcatacaattcaggagttcatgagggcatcgctactggagtaggtcttggagtacta
atgttagtcgtattctgcagttattccttggcaatatggtttggtggaaagatgatacta
gaaaaagggtacacaggggggcaggtgcttaacgtgatcattgccgtgttgagtggttcc
atgtccctggggcaggcatctccatgcatgagcgcatttgctgctggacaggctgcagct
tataaaatgtttgagactatcagtcgcatgccagagatagatgcttatgacacaagggga
aagatattggaagacatccgtggagatatagaattgagggatgtatatttcagttatcca
gctagaccagaagaacaaatatttagtggattttctctgtcaatcccaagtggcacaact
acagcattggtgggacaaagtggaagcgggaagtccacagtgatcagtctgatagagagg
ttttatgatccacaggctggtgaagtacgcatagatgggatcaacctcaaagagtttcag
ttaaaatggattagggagaaaattggacttgtcagccaagaaccagtgctgtttactgcc
agcattagggataatattgcgtatggaaaggatggagcaaccaccgaagagataagatct
gcagctgaacttgccaacgctgctaaattcatcgacaaactacctcagggattagacacc
atggctggtgagcatggaactcagctatctggtgggcagaaacagagaattgcaattgca
agagcaatcctgaaagatccacggattttacttttagatgaagccacaagtgcacttgat
gcagaatctgaaagggtagttcaggaggcactagacaggataatggtcaaccgaacaact
gttattgtagcccatcgtctgagtacaatcaggaatgctgatgttattgctgttatccac
cgtggaaagatggttgaaaaaggttcacattcagagttactcatggatcctgatggcgca
tactctcagcttatacgcttacaagaagtaaataaagattcagagcaaaaacctgaggac
cataaaagatcagatctttcttcagaatcttttagacaatcaagtcaaagaatctcactg
cgaagatccatcagccggggatcatctggtgtaggaaatagcagtcgtcattcattctca
gtctcatttggtttgcctacaggaattaatgccaccgataacccccaggaagaacctaca
gattctccatcaccagaaaatactccagaagttccaatccgtcgcctcgcatatctcaac
aagcctgagattccagtgctaatatttggagctatagctgcctgtgccaatggtgtcata
tttcccatctatggtatactactgtctagggtgatcaaatcattttatgaaccacctcat
gaattaagaaaggacacgaatttctgggcgcttatatttatgactcttggtctggcaagc
tttgtggtaataccattacaattttacttctttggcgtggctggcagtagattaatccaa
cggatccggactatttgtttcgagaaggtggttcacatggaggttggttggtttgacgag
cctgagcactcaagtggtgcaattggtgctaggctttcagcagatgcagcaacagtgcgt
gctttggttggagattcactagctcaaatggttcaaaaccttgcatcagcagtagcaggt
ctagtcattgccttcactgcaagttggcaattggccttcattattcttgcgctgattcct
ctcattggagtcactggatatgttcaagtaaagttcatgcaagggttcagtgcagatgca
aagatgatgtacgaggaagcaagccaagttgcaaatgatgctgttggaagtataagaaca
gttgcctctttctgtgcagaggagaaggtgatgcaaatgtacaaaaagaagtgtgaaggc
cctatgaagacaggaataaggcaaggtgtcataagtggaatgggatttggagcgtctttc
ttcttgctgttttctgtatatgcaaccagtttctacgcaggagctcaacttgtcaagcac
gggaagacatcattctcggatgtttttcaagttttctttgccttaaccatggctgctatg
ggaatttcacagtcaagttccttggctcctgattcctccaaggccaggagtgctgttgct
tccatattttcaattattgaccgacagtcaaagatagatccaagtgacgaatcaggaatg
accatagagaatgtgagaggagaaattgagcttcgtcgtgtaagctttaggtatccatct
aggccggacattcaaattttccgagacctgaacttggcaattcactctggcaagactgtg
gctctagttggagaaagtggaagtgggaaatcaactgtcatctcattattgcaaagattt
tatgatcctgattcaggtcatataactctagatggagttgaaattcaaaggctccaactc
aagtggctgaggcagcagatggggcttgtgagccaagaaccagtcttgtttaatgatacg
atccgtgccaacattgcgtatggaaaggatggagatgcaactgaagcagaaactttagca
gcatcagagttggccaacgctcacaagttcatcagtagcttacaacaggggtacgacact
cttgtaggagaacgaggggttcaattgtcaggtgggcagaaacagagggtagccatagct
cgtgccatagtgaaaagtccaaaaatactgctgttagatgaggcaaccagtgccttagat
gctgaatcagagagagtggtccaagatgcattagaccgagtaatggtgaacagaactaca
attgttgtagcccatcgattatctacaatccagaatgcagatgttattgcagtggttaaa
aatggggtcattgtagagaagggaaagcatgaaactttgatcaatatcaaagatggcttt
tatgcttccttagtctcccttcatacgactgcctcaactgcatga
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