Ricinus communis (castor bean): 8267803
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Entry
8267803 CDS
T01087
Name
(RefSeq) transcriptional activator DEMETER isoform X1
Organism
rcu
Ricinus communis (castor bean)
SSDB
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Gene cluster
GFIT
Motif
Pfam:
RRM_DME
Perm-CXXC
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
8267803
NCBI-ProteinID:
XP_015581912
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Position
6:complement(24244564..24258749)
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AA seq
1897 aa
AA seq
DB search
MSRRKKVDLKGKILQNMDSRIHLGEGFSVSQQETELQYVDSWMPVTPNKPIAIRSNPVLI
DRHESQLGSTNWQELVGFPSGYVQEMSNYSSLAQHCTQIDQFTRNGSFAEKNRMINHIAG
SYTRALLNENVSWSSNSLADLLVMNNTAPTAYPSRTLHRNTSIAERPLIPNLNTPVNSLR
EFNSGELFYTNQAHCSSSNVPSGHNSLFQMPQYGFPIPYNPNYDLNSPPSIEADAASTVT
NSFQFAPIIEQAKKLENQLSALVNFPQGKSSSEERDKQDNYVVSLGNVPNQHNPDKLFQN
IVDSASAVISTPFEEPKESCQGSDQVIDLNKTPQQKTPKRRKHRPKVIVEGKPKKTPKSV
TPKTVDPNEKAIEKRKYVRKKGQKESTTEHPDSIGETTNSTEKPKQKRKYVRKKSLKEPQ
IRNADYAGETTYPSAGTAASCRKALNFEMENTYSEREKNLVAQQEIMNKGKETYNLNTGF
HVSESLETHRTKSDLQMRRHNGSLLEFQQSRDVNNLTPFMNQISNNHQSNSHRREGAVRP
TARKDGQMDNSNGSGRDIDVGMLQHIHAEGTGRTVLPEKTNCKSLEKNEEIVYHSTESVT
KIPLLTEGRGYKRDYHQAELTMQNTGNPRGKLIFQEGVLIDDCHLNSHNSNAACPETCKK
QKNDGIQKNKNGMPPPVAAVNQSGGGNSKTDSSASTVERNRELLKSYLKSKRDVVEHYKH
SVASGQDLSLQHKWAGQNSCIERTGENCNIVPPTPPKMAPQSRDQLQPQICHIDASTKQT
MASTQSLSVPSRKGNMLQTQKNILKDQKSTAKRKAGQPAKQKPITIEEIIYRMEHLNLNE
VKGEQTAIVPYKGDGALIPYDGFEIIKKRKPRPKVDLDPETERVWKLLMWKEGGEGLEGT
DQEKKQWWEEERRVFGGRADSFIARMHLVQGDRRFSKWKGSVVDSVIGVFLTQNVSDHLS
SSAFMNLAAKFPLKSMRNRTCERDEPRRLIQEPDIYMLNPNPTIKWHEKLLTPFYNQSSM
TPHESIEHRRDQETSCTERTSIVEAHSYSPEEEVLSSQDSFDSSIVQSNGVIRSYSGSNL
EAEDPAKGCKHNENHNTSNAQKLEFEEFFSHVSGRSLFHEGSRHRHRELEDLEDGQQWTR
LDRLDNSLKGSSTFNQHDNSNNSQLQTRVESSQLYREDSISSWPSSTSKVGKEKDASCTS
IRVLQGAENVAKPTTQQYGSEKYPETSTAESHAFLSKQLMHEQSNPQLYHGSQSHEMNKT
FQLGSKSIAEPVNLSDAQDYRQSSYGQHVSNIPQLAAKVFDVEERITLMDNKQTDSENNF
IGSNSKENTHFTNKANLNRNASKARKAKAESGQKDAVDWDSLRKQVLVNGRKKERSESAM
DSLDYEAMRSAHVNEISDTIKERGMNNMLAERIKDFLNRLVREHGSIDLEWLRDVPPDKA
KEYLLSIRGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLEL
YPILESIQKYLWPRLCKLDQRTLYELHYQMITFGKVFCTKSRPNCNACPMRAECRHFASA
FASARLALPGPEDKSIVTATVPLTTERSPGIVIDPLPLPPAEDNLLTRRGSDIVSCVPII
EEPATPEQEHTEVIESDIEDIFDEDPDEIPTIKLNMEELTVNLQNYMQANMELQECDMSK
ALVALNPEAASIPTPKLKNVSRLRTEHQVYELPDSHPLLNRMDKRQPDDPSPYLLAIWTP
GETANSIQPPERHCQFQGPDKLCNEQTCFSCNSIRETNSQTVRGTLLIPCRTAMRGSFPL
NGTYFQVNEVFADHESSLNPIDVPRAWIWNLPRRMVYFGTSVSTIFKGLSTEGIQYCFWK
GFVCVRGFDQQSRAPKPLMARLHFPASKLAKTNNETQ
NT seq
5694 nt
NT seq
+upstream
nt +downstream
nt
atgagtagaagaaaaaaggttgatttgaaaggaaaaattctgcagaatatggattcaagg
atccatttaggagagggattttcagtctcacaacaagagacagaattgcagtatgttgat
tcttggatgccagtaactcctaacaaaccaattgcaataagatccaatccggtgctgatt
gataggcatgagagtcaattaggtagcacaaattggcaagaactggttggatttcccagt
ggatatgtgcaggagatgtcgaattatagcagtctggctcaacattgcacccaaattgac
caattcaccagaaatgggagttttgcagagaagaatagaatgatcaatcatattgcagga
tcctacacacgggcattacttaatgagaatgtgagttggagtagtaattcattggcagat
cttttggtgatgaacaatacagctcctactgcgtatccaagcagaactctgcacagaaac
acaagcatcgcagaaaggccattgatcccaaatctgaataccccagttaacagcttgaga
gaatttaactcgggcgagttgttttataccaatcaagcccactgctcaagttcaaacgtg
ccgagtggccataacagcttgttccaaatgccccagtacggttttcccataccttataat
cctaattatgatctaaattcaccaccaagtatagaagctgatgcagcatcaactgttacc
aattcatttcaatttgcaccaataatagagcaggcaaagaagttggagaaccagctgtct
gcacttgtaaatttcccacaggggaaaagctcaagtgaagagagagacaagcaagacaat
tatgttgtatcattaggcaatgtcccaaaccagcacaatcctgacaagctctttcagaac
attgtggactccgcatctgctgtaatttctacaccatttgaggaaccaaaagagtcttgt
cagggaagcgaccaagttattgatctcaataaaacaccccagcagaaaacaccaaaacga
agaaagcacaggcctaaagtgattgttgaaggaaaaccaaaaaagacaccaaagtctgta
accccaaaaacagttgatcccaatgagaaggcaattgaaaagaggaagtatgtgcgcaag
aagggccagaaagaatcaacaacagaacatccagattcaattggagagactaccaactcc
acagagaaaccaaagcaaaagaggaagtatgtgcgcaagaagagtttgaaagaaccacaa
atccgaaatgcagattatgctggtgagactacatatccaagtgctggaactgcagcatca
tgtagaaaagcactgaattttgaaatggaaaacacctacagcgagagggagaaaaattta
gttgctcagcaggagataatgaacaagggaaaagagacatacaacttaaacacaggtttc
catgtttcagaatcactcgaaacacacagaacaaagtccgatttacagatgcgtcgacac
aatgggtcactgttagaattccagcaatccagagatgtaaataaccttactccctttatg
aatcaaatatccaataaccaccagtcaaattcacacagaagagaaggcgcggtgcgacca
actgctagaaaagatgggcaaatggataactcaaatggcagtggtagagatatagatgtt
ggaatgctgcaacatatacatgcagaaggaactggcagaactgtcttaccagaaaaaaca
aattgcaaaagcctcgagaagaatgaagaaattgtgtatcatagtactgaatcagttacc
aagattccactgttaactgaaggtaggggatacaagagagattatcatcaagcagagctg
acaatgcaaaatactggcaatccacggggcaaattgattttccaagagggagttcttata
gatgactgtcacctaaatagccataattccaatgcagcatgtccagaaacttgcaagaaa
cagaaaaatgatggaatccagaaaaataaaaatggcatgccacctcctgttgcagctgtt
aaccaatcaggagggggaaatagcaaaactgattcatctgcatccacagtagagaggaat
agggaactcttgaaatcatacttaaaatccaagagagatgttgtggagcactacaaacac
tcggtggcttctggacaagatttgtcactgcagcacaaatgggctggacagaattcatgc
atagaaagaactggagagaactgtaacatagtcccaccaacacctcccaaaatggcccct
caatctagagaccaactgcagccccaaatatgtcatattgatgcatctacaaagcagaca
atggcatcgactcaatccctatcagttccatccagaaaagggaatatgctgcaaacacaa
aagaacatcttgaaagatcagaaatcaactgcaaaacgaaaagcagggcaaccagccaag
cagaaacccattacaattgaagaaattatataccgaatggagcatctcaatctcaatgaa
gtgaagggagagcaaactgcaattgttccctacaaaggagatggcgcactcattccatat
gacgggtttgaaattatcaagaaacgcaaaccaaggcctaaagtagaccttgacccagag
acagaaagggtatggaaactgctaatgtggaaagaaggaggtgaaggccttgaaggaaca
gatcaggagaaaaaacaatggtgggaggaagagaggagagtttttggtggacgagctgac
tcattcattgcaagaatgcatctcgtacaaggagataggcgtttctcaaaatggaagggg
tcagtcgttgactcagtgattggagttttcctaactcaaaatgtttcagaccatctttca
agctctgccttcatgaatctagctgcaaaatttcctttaaagtcaatgagaaacagaacc
tgtgagagggatgaaccaagaagactgattcaagaaccagatatctacatgctaaaccca
aatcccaccatcaaatggcatgagaagttgctaactcctttctacaaccagagctctatg
acaccacatgaatcaatagaacatcggagagaccaggagacctcatgcacagaaagaaca
agcatagtagaggcacatagttacagccctgaagaagaagtcttgtcatcacaagattct
tttgattcctcaattgttcaaagcaatggagtcatcagatcctactcaggttccaactta
gaagcagaagatcctgcaaaagggtgcaaacacaacgagaatcacaatacttcaaatgct
cagaaattggagtttgaagagttcttcagtcatgtcagtgggagatcattgtttcatgag
ggatctaggcatagacatagggaactagaagatttagaagatgggcagcaatggacaaga
ttggacagattagataacagtctaaaaggctcttccacatttaatcagcatgacaattct
aataattcacagttgcaaacacgagtagaaagctcacaattgtatagagaagatagcata
tcttcttggccttcaagcacctccaaagttggcaaggaaaaagatgcaagttgcacaagc
ataagggttttacaaggggcagagaatgtagctaaacccacaacacaacaatatgggtca
gaaaagtatccagaaacctcaacagcagaatcgcatgctttcttaagcaagcaattaatg
catgaacaaagtaatcctcaactgtaccatggcagtcagtcacatgaaatgaacaagacc
ttccaattgggaagcaaatcaattgccgagcctgtgaatctgtctgatgcacaggattac
aggcagagcagttatgggcagcatgtctcaaacatccctcaactcgcagcaaaagttttt
gatgttgaagagagaataactttgatggacaataaacaaacagactcggaaaataatttc
attgggtcaaactcaaaggaaaatacacattttactaataaagcaaacttaaatagaaat
gcatcaaaagcaagaaaagcaaaggctgagagtgggcaaaaagatgcagttgactgggat
agtttgaggaagcaggtgctggtaaatggcagaaagaaagagagaagtgaaagtgcaatg
gactccttggactatgaagcaatgagaagtgctcatgtcaacgagatttctgatactatt
aaagaaagagggatgaacaacatgctagccgaacgaatcaaggatttcctaaaccgactg
gttagagaacatggaagcattgacctggaatggttaagagatgtcccccctgacaaagca
aaagaatatctcctaagtatacggggactgggattgaaaagcgtggagtgcgtgcggctc
ttaacacttcatcatcttgctttcccggttgacacaaatgttggaaggatagcagttcga
ctaggatgggtccctctccaaccactgccagagtcacttcaattacaccttttggaactg
tacccaatactcgagtcaatccagaaatacctctggccaagattgtgcaaacttgatcaa
cgaacactgtatgaattacattaccagatgattacatttggaaaggttttctgtacaaag
agtaggccaaattgcaatgcatgtccaatgagagcagaatgcagacattttgctagtgcc
tttgcaagtgcaagacttgctctgcctggaccagaagataagagtatagttactgcaact
gttcccttgacaacagaaagaagccccggcatagttattgatccattgccattacctcca
gcagaggacaatttgcttacaagaagagggtctgatattgttagttgtgtgcctatcatt
gaagagccagccacgccagaacaagaacacacagaagtaatagaaagtgatatagaggat
atatttgatgaggatcctgatgaaataccgacaataaaactcaacatggaagagttgaca
gtgaatctacagaattacatgcaagcaaacatggaactccaagaatgtgacatgtcaaag
gctttagttgctttgaatccagaagctgcttccatccccacacccaaactgaaaaatgtc
agtcggctacggacagaacaccaagtgtatgaacttccagattcacatcctcttcttaat
aggatggacaaaagacaacctgatgatcctagtccataccttctagcaatatggacacca
ggtgaaacggcaaattcaattcagccaccagagagacattgtcagttccagggaccagac
aaattatgcaatgagcagacatgcttttcctgtaacagtatcagagaaactaattcacaa
acagtcagaggaacacttctgataccttgtagaacagcaatgcgaggaagctttccactc
aatgggacatactttcaagtgaatgaggtatttgcagatcatgaatctagcctcaatcca
attgatgttccaagagcatggatctggaatttgccaagacgaatggtgtactttggaacc
tctgtatcaacaatatttaaaggcctttcaacagaaggtattcagtactgcttttggaaa
ggatttgtttgtgtgagagggttcgaccagcaatcaagagcacccaaaccgcttatggcc
agattgcactttccagcaagtaaattagcaaagacaaataatgaaacacaatga
DBGET
integrated database retrieval system
