Ricinus communis (castor bean): 8270362
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Entry
8270362 CDS
T01087
Name
(RefSeq) paired amphipathic helix protein Sin3-like 4 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rcu03036
]
8270362
Chromosome and associated proteins [BR:
rcu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
8270362
REST complex
8270362
Heterochromatin formation proteins
Other heterochromatin formation proteins
8270362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
Motif
Other DBs
NCBI-GeneID:
8270362
NCBI-ProteinID:
XP_015575284
UniProt:
B9S2H7
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All DBs
Position
1:5022741..5032683
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AA seq
1456 aa
AA seq
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MKRSRDDVYVTSSSQSQLKRPMVSSRGETSGQPQMMGGGGGGSGGGGGGGGGASGGGGGG
ASGGGQKLTTNDALAYLKAVKDIFQDKRDKYDDFLEVMKDFKAQRIDTAGVIARVKDLFK
GHRDLILGFNTFLPKGYEITLPLEDEQPPQKKPVEFEEAINFVNKIKTRFQGDDHVYKSF
LDILNMYRKENKSITEVYQEVATLFQDHNDLLMEFTHFLPDSSATASAHYAPSVRNSIHR
DRSSAMPTMRQMHIDKKERMTASHADRDFSVDRPDPDHDRSLIRSDKEQRRRGEKEKERR
EDRVRREREREDRDYEHDGSREFNMQRFPHKRKSTRRVEDSAADHQGGDGDENFGMHPVS
STFDDKNAVKNALSQELSFCEKVKEKLRNADDYQGFLRCLHLYTKEIITRAELQSLVNDL
LGKYQDLMDGFDEFLARCEKNEGLLAGVVSKKSLWNEGNLPRPVKLEDKDRDRDRGREDG
IKDRERETRERDRLDKNVAFGPKDTGGHKMSLFSSKDKFLAKPINELDLSNCERCTPSYR
LLPKNYPIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFEL
DMLLESVKVTTKRVEELLEKINNNTIKADGLIRIDEHLTALNVRCIERLYGDHGLDVMDV
LRKNTSLALPVILTRLKQKQEEWQKCRADFNKVWAEIYAKNYHKSLDHRSFYFKQQDTKS
LSTKALLAEIKELSEKKRKEDDMLLAFAAGNRRPIIPNLEFEYPDPDIHEDLYQLIKYSC
GEVCTTEQLDKVMKVWTTFLEPMLGVPSRPQGAEDTEDVVKAKNHSSKSGDSEGSPSGGA
TIINKHPNPSRNGDESMPLEQSSSCRNWLPNGDNGSPDVERIARKSDTSCSTIQHDKLQN
NPASADETSVVGKQATSSERLVNSNTSLATGAELSNGRTNVESGLNNTPSRPSNGALNGG
FGLGSSNENLPSAEGGDFSRPNISTNGLMIEGMRSQRYNDESAAQFKIEREEGELSPNGD
FEEDNFAAYGEAGSEAVHKAKENAVNRQYQTRHGEEETCGEAGGENDADADDEGDESAHR
SSEDSENASENGEVSGSESGDGEDCSREEHEEAGEHDEHDNKAESEGEAEGMADAHDVEG
EGTMLPFSERFLLNVKPLAKHVPPALHDKDKGSRVFYGNDSFYVLFRLHQTLYERIQSAK
INSSSAERKWRASNDTSPTDLYARFMSALYNLLDGSSDNTKFEDDCRAIIGTQSYVLFTL
DKLIYKLVKQLQTVASDEMDNKLLQLYAYEKSRKPGRFIDVVYHENARVLLHDENIYRIE
CCSTPTHLSIQLMDFGHDKPEVTAVSMDPNFAAYLHNEFLSIVPDKKEKSGIFLKRNKHR
CGSHDESQTMEGFQVLNGLECKIACNSSKVSYVLDTEDFLFRTKRRKRTPQPNSSCHDQT
KTSKKVEQFHRWLSSS
NT seq
4371 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggtcaagagatgatgtatacgtcacctcttcttctcaatctcaacttaagagg
cctatggtctcttcacgtggtgaaacttcggggcaaccacagatgatgggaggaggagga
ggtggtagtggtggtggtggtggtggaggaggaggagctagtggtggtggaggaggagga
gctagtggtggtggacagaaactaacaacaaatgatgctttggcatatctcaaagctgtg
aaggatatatttcaagataaaagggataaatatgatgactttcttgaggtcatgaaggat
ttcaaagctcaaagaattgacactgcaggtgtcatagccagggtaaaggatttatttaaa
gggcatcgtgacctaattttaggtttcaataccttcttgcctaagggatatgagatcacc
ctccctctagaggatgaacaacctccacagaaaaagcctgttgaatttgaagaagcaatt
aattttgtgaacaaaattaagactaggtttcaaggtgatgatcatgtttataaatcattt
ttagacattttgaacatgtacagaaaagaaaataaatcgattacagaagtctaccaagag
gttgctacactttttcaagaccacaatgatctgctcatggagtttactcattttctacct
gattcttcagctacagcctctgctcactatgctccatctgttaggaattctattcatcgt
gatcggagctctgccatgcccaccatgcgacaaatgcatatagacaagaaagaaaggatg
actgcttcccatgcagatcgtgacttcagtgttgaccgtcctgatccagaccacgataga
tctctaataagatcagacaaagaacaaagaagacgtggtgaaaaagaaaaggagagaaga
gaagatagagttaggagagaacgggaacgagaagatagagattacgagcatgatggcagt
cgtgagttcaacatgcaacggtttccccacaaacgaaaatctactcgtagggttgaagat
tcggctgctgatcatcaaggtggggatggggatgaaaattttggaatgcaccctgtttca
tccacttttgatgataaaaatgctgtgaaaaatgcactaagtcaagaactgtctttctgt
gagaaagtgaaggaaaagctgcgtaatgctgatgattaccaaggatttttgaggtgcctt
catctatataccaaggaaattatcacaagagcagagttacaatccttggtaaatgattta
cttggaaaatatcaagatcttatggatggctttgatgaatttttggctcgatgtgaaaag
aatgaaggtctactagcaggtgttgtgagtaaaaaatccctgtggaatgaaggtaatttg
cctagacctgtgaagctggaagacaaggatagagatcgggatcgcgggagggaagatggg
atcaaagatagagaacgcgaaacgcgtgaaagggatagacttgacaaaaatgtagccttt
ggtcctaaagatactgggggtcacaagatgtccttattttctagcaaggataagtttttg
gcaaaacccattaatgaacttgacctatctaactgtgagcgctgcactcccagctatcga
cttctaccaaagaattatcccataccttcagcaagtcagaggacagaacttggtgctgaa
gtactaaatgatcattgggtatctgtcacttcaggaagtgaagattattcttttaaacac
atgcggaaaaaccagtatgaagaaagcctgtttcgatgtgaagatgacaggtttgagctg
gacatgttgttggaatctgtgaaggtgacaaccaagcgcgtcgaagaactgttggaaaag
atcaacaataatacaatcaaagcagatggcctaatacgtattgatgagcacttaacagct
ctgaatgtaaggtgcattgagcgtttgtatggtgatcatgggcttgatgtgatggacgta
ttaaggaagaacacttctcttgctttgcccgttatattaactcgtttgaagcagaaacaa
gaagagtggcaaaagtgccgtgctgactttaacaaagtttgggctgaaatttatgctaag
aactatcacaagtcccttgatcatcgtagcttctatttcaagcagcaggatactaagagc
ttgagcacaaaggccttattggcagaaatcaaagaacttagtgagaagaagcggaaagaa
gatgatatgcttcttgcttttgctgctggaaacagacggcctattataccaaatttggaa
tttgagtacccagatcctgacattcatgaggatttatatcagctcattaaatactcctgt
ggagaagtctgtacaactgaacagttggacaaagtcatgaaggtttggacaacttttttg
gaacccatgcttggtgttccttctcggcctcagggtgcagaggacacagaagatgttgtg
aaggcaaagaatcattcctccaaaagtggagatagtgaaggcagccctagtggtggtgct
acaattatcaacaagcatccaaatccttctaggaacggagatgaaagcatgccacttgag
caatccagttcatgcaggaactggttgccaaatggagataatggttctccagatgtagaa
cgaattgctcgtaagagtgatacatcctgcagtacaattcaacatgataaattgcagaat
aatcctgcctcagctgatgaaacatcagtagttggcaaacaagctacttccagtgaacga
ttggtcaattcaaacacatcacttgccactggagcagagctaagtaatggaagaactaat
gtagaatcagggcttaacaatactccttcaagaccaagcaatggtgccctcaatggtggg
ttcggattaggttcaagcaatgaaaatttaccttcagcagagggtggtgatttttcaaga
ccaaacatatccacaaatgggctgatgatagaaggcatgaggagtcagagatataatgat
gaatctgctgcacaatttaaaattgagagagaagagggtgaattgtctccaaatggagat
tttgaggaagataattttgcagcttatggagaagctggttcagaggctgtgcataaggca
aaggaaaatgctgtaaacaggcaataccaaacaagacatggtgaagaagaaacatgtggg
gaggcaggaggagaaaatgatgctgatgctgatgatgaaggcgatgaaagtgctcacagg
tcatcagaggacagtgagaatgcctctgagaatggtgaggtttctggaagtgagtccggt
gatggtgaagattgttctcgggaagagcatgaggaagctggagaacatgatgagcatgat
aataaagctgaaagtgaaggtgaggccgaagggatggctgatgcccacgatgttgaagga
gaaggaacgatgttgccgttttcagaacgatttcttctaaacgtgaagcctctagcaaag
catgtaccaccagcattgcatgacaaagataagggttctcgggttttctatggaaatgat
tctttctatgtgctttttaggcttcatcaaacgctctatgagagaatacaatcagcaaaa
attaattcatcatctgctgaaaggaaatggagggcgtcaaatgatacaagtcctactgat
ctctatgccaggtttatgagtgctctttacaacttgcttgacggttcttctgataataca
aaatttgaggatgactgccgggctattattggaacccaatcatatgttctattcacatta
gacaagttgatatataaacttgtcaaacagctccaaacagtggcatctgatgagatggac
aacaagctacttcaactatatgcatatgaaaaatcaagaaaacctggacgattcattgat
gtagtctatcatgaaaatgcccgcgttcttcttcatgatgagaacatatatcgaattgaa
tgttgttccacaccaacccatttgtctattcagctcatggactttggacatgataagcct
gaagtgactgctgtttccatggatcctaattttgcagcatatctgcacaatgaattcctc
tccattgttcctgacaaaaaggaaaagtctgggattttcctgaagaggaataaacacaga
tgtggaagtcatgatgaatctcagactatggaaggatttcaagtgcttaatggtctagag
tgcaagattgcttgcaattcatccaaagtatcctacgttttagatacagaagattttttg
ttccgaactaagaggagaaaaagaactccgcaaccaaacagctcatgccatgaccaaaca
aagacttccaaaaaagtagagcagtttcacagatggttatccagctcataa
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