Ricinus communis (castor bean): 8274691
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Entry
8274691 CDS
T01087
Name
(RefSeq) ABC transporter B family member 13 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
8274691
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rcu02000
]
8274691
04147 Exosome [BR:
rcu04147
]
8274691
04090 CD molecules [BR:
rcu04090
]
8274691
Enzymes [BR:
rcu01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
8274691
Transporters [BR:
rcu02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
8274691
Exosome [BR:
rcu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
8274691
CD molecules [BR:
rcu04090
]
Proteins
8274691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_29
ABC_ATPase
AAA_16
Zeta_toxin
DUF87
RsgA_GTPase
AAA_21
AAA_30
AAA
SbcC_Walker_B
P-loop_TraG
AAA_23
nSTAND1
DLIC
ECH_2
Motif
Other DBs
NCBI-GeneID:
8274691
NCBI-ProteinID:
XP_002510564
UniProt:
B9R8C1
LinkDB
All DBs
Position
2:complement(1114718..1120989)
Genome browser
AA seq
1252 aa
AA seq
DB search
MNEVELASDQVLDQNSPKAMDQPSSSSKTPTVSFFALFSAADKIDYFLMFFGSLGACIHG
ASLPVFFIFFGRMIDSLGNLASDPQKMSTQVSKHALYLVYLGLVVFVSAWIGVALWMQTG
ERQTARLRLKYLQSVLRKDMNFFDTEARDSNIMFHISSDAILIQDAIGDKTGHAMRYLSQ
FIVGFAIGFVYVWQLTLLTLAVVPLIAVAGGAYTVIMSTLSEKGEAAYAEAGKVAEEVIS
QIRTVYSFVGEDKAIEAYSKSLNKALKLGKKSGVAKGVGVGFTYGLLFCAWALLLWYASI
LVRHHHINGAKAFTMIINVIFSGFALGQATPNLAAIAKGRAAAANIINMIKKDSCPSNSS
EDGIELPEVDGKIEFCNICFSYPSRPNMVFENLSFSVSAGKTFAVVGPSGSGKSTVISMV
QRFYEPNSGKILLDGHDLKTLRLKWLREQLGLVSQEPALFATTIADNILFGKEDGRMDQV
IEAAKVANAHSFVQQLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSA
LDAESELIVQQALDKIMSNRTTIIVAHRLSTIRDVDTIIVLKNGQVAESGNHLDLISKGG
EYASLVGLQVSEHLKHSNSIGHSEADGNSSFGELPHSHNNPLNFKSISTGEVQSNDERID
LANHASTASIWELLKLNSPEWPCALLGSLGAVLAGMEAPMFALGITHVLTAFYYPDASEM
RHEIQRVVLIFVGLAVITIPIYLLQHYFYTLMGERLTARVRLSMFSAILSNEIGWFDLDE
NNTGSLTSTLAADATLVRSALADRLSTVVQNVALTVTACVIAFTLSWRVASVVVASLPLL
VGASIAEQLFLKGFGGDYHAYSRATSVAREALTNIRTVAAFGAEERISIQFASELNKPNK
QALLRGHVSGFGYGITQLFAFGSYALGLWYASILITHRDSNFGNIMKSFMVLIITALAIA
ETLALTPDIVKGTQALAPVFSILHRKTAIDPENPTSKMVADIKGDIDFRNVNFKYPARPD
ITIFQQLNLKVPAGRSLAVVGQSGSGKSTIIALLLRFYDPISGTILIDGCEIKTLNLKSL
RLKIGLVQQEPALFSTTIYENIRYGNENASEIEIMKAAKAANAHGFISRMPEGYQTHVGD
RGLQLSGGQKQRVAIARAMLKNPSILLLDEATSALDTESEKTVQEALNKLMEGRTTILVA
HRLSTIRDADSIAVLQHGKVAEIGSHTQLIGKPDSIYKQLVSLQQETSRKLY
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaagtggagcttgcctctgatcaggttttggatcagaattcacctaaagcaatg
gatcaaccatcaagttcaagcaaaactcccaccgtttcattctttgctctattttctgca
gctgataaaattgattacttcttgatgttttttggaagtctaggggcatgcattcatggt
gcttcacttcctgttttctttatctttttcggtcgtatgattgattcccttggaaatcta
gcttccgatcctcaaaaaatgtctacacaagtttccaagcatgccttgtacttggtgtat
ttggggcttgtggtttttgtatcagcatggataggtgttgctttgtggatgcaaactggg
gagaggcaaacagctcgtttgcgtctcaagtaccttcaatctgttttaaggaaggatatg
aattttttcgacacagaagccagagattccaacatcatgttccacatctccagtgatgcg
atactaatacaagatgcaataggtgacaagacaggccatgccatgcgctacctttctcag
ttcattgttggatttgccataggatttgtatatgtgtggcaactaacactcctcaccttg
gctgtggttccgttgatagctgttgctgggggagcttatactgtgatcatgtctacctta
tcagagaaaggtgaggctgcttatgctgaggctggcaaggttgcagaagaggttatttca
caaattcgcactgtatactcatttgtaggagaggataaagcaattgaagcatattctaag
tcccttaataaagcacttaaattggggaagaaaagtggggttgcaaaaggagttggtgtt
ggatttacatatgggctattgttttgtgcttgggcattgcttctctggtatgccagcatc
cttgttaggcatcaccacataaatggggcaaaagctttcacaatgattatcaatgtcatt
tttagtggatttgctcttggtcaagctactccaaaccttgctgctattgctaaaggccgg
gctgccgccgccaatatcattaacatgatcaagaaagactcttgtccttctaacagctca
gaagatggaattgagttgccagaagtagatgggaaaatcgaattttgcaatatctgtttc
tcttacccctcacgacccaatatggtctttgagaatctgagcttttctgtaagtgccggg
aaaacctttgcagttgttggtcccagtggctcaggaaagagcactgttatatctatggtt
caacgtttctatgaacccaattcaggtaaaatactattggatggacatgatctcaagact
cttcgcctcaaatggctgagagaacagcttggattggtaagtcaggaaccagcgttattt
gccacaactatagctgataatattttgtttggtaaagaagatggaaggatggatcaggtt
attgaagctgccaaagttgccaatgcacattcttttgttcaacaattacctgatggctat
caaactcaggtgggggagggaggaactcagctttctggtggacaaaagcaaagaattgct
atagcaagagcagtgttgagaaatccaaagatactacttttggatgaggctactagtgct
cttgatgcagaatcagagctcattgttcagcaggccctggataaaatcatgtcaaatcgg
actactatcattgtcgcacaccggctatccactattcgagatgtcgacaccatcattgtc
ttgaagaatggccaagttgctgagagtgggaaccatttggacttgatatctaagggagga
gagtatgcaagtctagtgggtttgcaagtatcagaacatttaaaacattcaaattcaata
ggtcattctgaagctgatgggaattctagctttggagaacttccgcacagtcataacaac
ccgctgaattttaagtcaatctcaacaggagaggtgcagtcaaatgatgaaagaatcgac
ttagccaaccatgcttcaactgcatcgatttgggaactgctgaagttaaattcaccagaa
tggccttgtgcactgcttggttcattgggtgcagttttggctggcatggaagctcctatg
tttgcactagggataacacatgtcctgactgcattttattatcctgatgcttctgaaatg
agacatgagattcaaagggtagttttgatttttgtgggactggctgtgattaccattcct
atatatcttctgcaacattatttctacactttgatgggagagcgtcttaccgctcgtgtt
cgtctatcgatgttctcagctatcctttccaatgagattggctggtttgatttagatgag
aacaataccggctcgctaacatcaactttggctgctgatgcaactttggtgcggagtgct
cttgctgaccgcctctcaacagtcgtgcagaatgtggcacttacagttacagcatgtgtt
attgcctttacactaagttggcgcgtagcatctgttgttgttgcctccttacctctgctt
gttggagcttctatagctgagcaactttttctcaaggggtttggaggagactatcatgct
tactctagagcaacttctgtggcacgagaagcactcaccaatattcgcacagttgctgca
ttcggggctgaagaacgaatctccattcagtttgcctctgaactaaacaaaccaaacaag
caagcgctcttacgaggacatgtatcagggtttgggtatggcattactcagctatttgct
tttggttcctatgcccttggcctttggtatgcgtcaatccttatcacacacagggattcc
aactttgggaacatcatgaagtccttcatggttttgataatcactgcactagctatagca
gaaactcttgctcttacaccagacattgtgaaaggtacacaggcacttgcaccagttttt
agcattctccataggaaaacagctatagaccctgagaatccgacatcaaaaatggtggct
gatatcaaaggggatatagatttcagaaatgtgaatttcaagtaccctgccaggcctgac
atcaccatttttcagcagttaaatctcaaagttccagcaggcagaagtcttgctgtagtt
ggtcaaagtggatcaggaaagagtacaataattgccctactgctgagattctatgatccc
atttctggaacaattttgattgatggatgtgagattaaaaccttaaacttgaaatcacta
aggctaaagataggtttggtgcaacaagagccagcattattctccacaactatttatgaa
aacatcaggtatgggaatgaaaatgcctcagaaattgagataatgaaggcagcaaaagca
gcaaatgctcatggatttatcagcagaatgcctgaaggataccaaactcatgtgggtgat
aggggactgcagttatcagggggacagaaacagagagtggcaattgctagagcaatgctc
aaaaacccttccattcttcttctggacgaagctactagtgcactggatacagaatctgag
aagacggttcaagaggctctaaataagcttatggaaggaagaacaacaattttggtagct
cataggttgtcaacaattcgcgatgcagatagcatagctgtattacaacatgggaaagta
gctgaaattggcagccatacacagctgataggaaaacctgatagtatctataagcaatta
gttagcctgcaacaagaaacaagcagaaagttatactga
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