Ricinus communis (castor bean): 8277367
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Entry
8277367 CDS
T01087
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00040
Pentose and glucuronate interconversions
rcu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
8277367
Enzymes [BR:
rcu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
8277367
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
8277367
NCBI-ProteinID:
XP_002511525
UniProt:
B9R950
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Position
4:complement(25843681..25845592)
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AA seq
433 aa
AA seq
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METVKYIKLLVIAFATIIPTLKANIAHFDKVWQQRAKEASHAALQAYHPNPEDIVNHFNK
EVAKSLNDFSSTSSQLSQHKRPCHATNPIDRCWRCDANWASNRKKLAGCALGFGRMTTGG
KDGDYYVVTDPSDDDLVNPREGTLRYGVIQDRPLWITFAGDMVITLSQELIINSNKTIDG
RGANVHISCGAQITIQYARNIIIHGIHIHDIRGGSGGKIRDSETHFGKRTASDGDGISIY
GSNNIWIDHVSISNCTDGLIDAIMASTAITISNCHFTRHNTVMLLGGNNKFSADSVMQVT
VAFNHFDRKLVQRMPRVRYGLAHVVNNDYTSWEMYAIGGSEHPTIISQGNRFLAPPDPDC
KQVTKRNVEPESEWKSWNWRSEGDLMLNGAFFVESGSPIETHGKEEVHAMPGTLVHRLTR
YAGALHCKKQKPC
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgtgaagtacataaagttgcttgttattgcatttgctaccataattcctacc
ttgaaagccaacattgctcattttgacaaagtctggcagcagcgagccaaagaggcttcg
catgctgctctacaggcctaccaccccaatcctgaagacatcgttaaccatttcaataag
gaagttgccaagtccctaaatgacttcagtagcactagcagtcaactaagccaacataaa
agaccatgtcatgccacaaatcctattgaccgatgttggaggtgtgatgcaaactgggct
agtaaccgcaagaagctggctggttgtgccctagggttcggccggatgaccaccggaggc
aaggacggggattactacgtcgtgacggacccatccgatgatgacttggtgaacccgaga
gaaggtacattgcgctatggagtaatccaggacaggccactctggataacattcgcaggg
gacatggtgatcactctaagccaagagctaattataaactctaataagaccattgacggc
cgtggggctaatgtgcatatcagctgtggtgctcaaattactatacagtacgcgagaaat
atcatcattcatggcatccacattcatgatatcagaggtggtagcggtggcaagattaga
gactcagaaacacactttggaaagagaactgctagtgatggagacgggatctccatttac
ggatccaataatatttggatcgatcatgtctccatctctaattgcactgatggccttatt
gatgctataatggcatccactgccatcaccatctctaactgccactttacccggcataac
actgtaatgctattaggtggaaataataagttctcggcagattcagtgatgcaagtaaca
gtggcttttaaccactttgatcgtaaactggtacaaagaatgcctagggttcggtatgga
cttgcccatgtggtaaataatgactacaccagctgggaaatgtatgccatcggtggtagc
gagcaccccaccatcattagccagggtaaccgctttcttgcaccccctgatccagactgc
aaacaggtcaccaagaggaatgtcgagcccgaaagtgagtggaaatcatggaattggaga
tcagagggagatctgatgctgaatggagctttctttgttgaatctggtagtccgatagag
acacacgggaaggaggaggtacatgcaatgccggggacacttgtccacaggctcactcgt
tatgctggagctcttcattgcaaaaaacaaaaaccttgctga
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