Ricinus communis (castor bean): 8278584
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Entry
8278584 CDS
T01087
Name
(RefSeq) dnaJ homolog subfamily C GRV2 isoform X1
KO
K09533
DnaJ homolog subfamily C member 13
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rcu03041
]
8278584
03110 Chaperones and folding catalysts [BR:
rcu03110
]
8278584
Spliceosome [BR:
rcu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
8278584
Chaperones and folding catalysts [BR:
rcu03110
]
Heat shock proteins
HSP40 / DNAJ
8278584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RME-8_N
GYF_2
DnaJ
SYCE1
Motif
Other DBs
NCBI-GeneID:
8278584
NCBI-ProteinID:
XP_048227951
LinkDB
All DBs
Position
3:31681016..31696952
Genome browser
AA seq
2587 aa
AA seq
DB search
MEPSNPNTPAPPPPSNSSSAPTQEEPEYLARYLVIKHSWRGRYKRILCISNVSIITLDPN
SLSVTNSYDVASDFEGASPIVGRGDENLNSNHEFNLSVRTDGKGKFKGIKFSSKFRASIL
TELYRLRWNRLSPVAEFPVLHLKRRNGDWLPFKLKITCIGVELIDLKSGDLRWCLDFRDM
NSPAIVLLSDAYGKKTSDYGGFVLCPLYGRKSKAFQAASGTTNTAIVSNLTKTAKSTIGV
SLSVENSQTLSVFEYIRQRAKEAVGAAETPCGGWSVTRLRSAAHGTLNVPGLILGVGPKG
GLGEHGDAVSRQLILTKVSLVERRPENYEAVIVRPLSAVSSLVRFAEEPQMFAIEFNDGC
PIHVYASTSRDSLLAAVRDVLQTEGQCPVPILPRLTMPGHRIDPPCGRVHLLAGPQHPIA
DMESASMHLKHLAAAAKDAVAEGGSLPGSRAKLWRRIREFNACIPYSGVPPNIEVPEVTL
MALITMLPATPNLPPESPPLPPPSPKAAATVMGFIACLHRLLASRTAASHVMSFPAAVGR
IMGLLRNGSEGVAAEAAGLVSTLIGGGPVDPSSLTDSKGERHATIMHTKSVLFAHNGYVI
ILANRLKPMSVSPLLSMAVVEVLEAMICEPHGETTQYTVFVELLRQVAGLRRRLFALFAH
PAESVRETVAVIMRTIAEEDAVAAESMRDAALRDGALLRHLLHAFYLPAGERREVSRQLV
ALWADSYQPALDLLSRVLPPGLVAYLHTRSDGVQSEDANQEGSLVSRRQRRLLQQRRGRV
GRGITSQDQSLPSVNNYEVGDPVRQANSGGFKGSDNYHRSAVDPHSGQPSTVHTIESLSR
DVQSVGLSQNGQGLPSADLPSINMHDTAEPGASNLVDSDVHGASPQSTGLPAPAQVVVEN
TPVGSGRLLCNWPEFWRAFSLDHNRADLVWNERTRQELREALQAEVHKLDVEKERTEDIV
PGGASTEMKTGQDSVPQISWNYSEFSVSYPSLSKEVCVGQYYLRLLLDSGSSGRAQDFPL
RDPVAFFRALYHRFLCDADTGLTVDGAVPDELGASDDWCDMGRLDGFGGGGGSSVRELCA
RAMAIVYEQHCNTIGPFEGTAHITVLLDRTDDRALRHRLLLLLKVLMKVLSNVEDCVVVG
GCVLAVDLLTVVHEASERTAIPLQSNLLAATAFMEPLKEWMFINKDGAQVGPVEKDAIRR
FWSKKEIEWTTKCWASGMVEWKRLRDIRELRWALAVRVPVLTPSQVGDAALSILHSMVSA
HSDLDDAGEIVTPTPRVKRILSSPRCLPHIAQAMLSGEPNIVEAAASLLKAVVTRNPKAM
IRLYSTGTFYFALAYPGSNLFSIAQLFAVTHVHQAFHGGEEAAVSSSLPLAKRSVLGGLL
PESLLYVLERSGPAAFAAAMVSDSDTPEIIWTHKMRAENLIRQVLQHLGDFTQKLSQHCH
FLYEYAPMPPVTYPELRDEMWCHRYYLRNLCDEIRFPNWPIVEHVEFLQSLLVMWREELT
RRPMDLSEEEACRILEISLEDVSSDDAKKQRSFETSEEITSISKQIENIDEEKLKRQYRK
LAMKYHPDKNPEGREKFLAVQKAYERLQATMQGLQGPQPWRLLLLLKGQCILYRRYGDVL
EPFKYAGYPMLLNAITVDEVDNNFLSSDRAPLLTAASELTWLTCESSSLNGEELVRDGGI
QLLATLLSRCMCVVQPTTSASEPSAIIVTNVMRTFSVLSQFESARAEMLELTGLVNDIVH
CTELELAPDAVDAALQTIARVSVSSGLQDALLKAGVLWYLLPLLLQYDSTAEESDKTESH
GVGSSVQIAKNMHAVRASQALSRLSGLCTDGSSTPYNAAAADALRALLTPKLASMLKDQF
PKDLLSKLNTNLESPEIIWNSSTRAELLKFVDQQRASLGPDGSYDLKDSQVFLYDALSKE
LFIGNVYLRVYNDQPEFEISEPEAFCVALIDFISFLVQNQFSVGSDAQKKLDSSSSSLET
SEIQNSTADESINGHVMDDSSAVSDGKSADREELELVKNLKLGLTSLKNLLTSNPNLASI
FSSKEKLLPLFECFSVPVAPESNIPQLCLGVLSLLTTYAPCLEAMVADGSSLLLLLQMLH
SAPTCREGVLHVLYALASTPELAWAAAKHGGVVYILELLLPLQKDIPLQQRAAAASLLGK
LVGQPMHGPRVAITLARFLPDGLVSVVRDGPGEAVVSALELTTETPELVWTPAMAASLSA
QIATMASDLYREQMKGRVVDWDVPEQASGQQEMRDEPQVGGIYVRLFLKDPKFPLRNPKR
FLEGLLDQYLSSIAATHYDIQAVDPELPLLLSAALVSLLRVHPALADHVGYLGYVPKLVA
AVAYEGRRETMSSEEVQNGNYADKTYESDDGTTPPAQTPQERVRLSCLRVLHQLAASTIC
AEAMAATSVGTPQVVPLLMKAIGWQGGSILALETLKRVIVAGNRARDALVAQGLKVGLVE
VLLGLLDWRAGGRNGLCSQMKWNESEASIGRVLAVEVLHAFATEGAHCNKVREILNASDV
WSAYKDQKHDLFLPSSAQSAAAGVAGLIENSSSRLTYALTAPPLQPAQARPPASTTLDSN
GKQDPFS
NT seq
7764 nt
NT seq
+upstream
nt +downstream
nt
atggaaccttctaaccctaacactcctgctcctcctcctccttctaattccagttctgcc
cctactcaagaagaacctgaatatctcgcgcgttatctcgtaatcaaacactcttggcgt
ggtcgatataaaaggattctatgtatatcaaatgtttcgattattactctagaccctaat
tctctctctgttaccaactcttatgatgttgctagtgatttcgaaggtgcttctccgatt
gttggccgtggtgatgagaatttgaattctaatcatgagtttaatttgagtgtgagaact
gatggtaaaggtaaatttaaagggattaagttttcttctaaatttagggctagtattttg
actgaattgtatagactcagatggaataggttaagtcctgtagctgagtttcccgttttg
catcttaagaggaggaatggcgattggctcccttttaaattaaaaattacttgtattgga
gttgaattgattgatttaaaatctggggatctacgctggtgcttggactttagagatatg
aattcccctgccattgtgctcctttctgatgcttatggaaagaaaacaagtgattatgga
ggatttgttctttgccctttgtatggaagaaaatcaaaagccttccaagctgcttcaggg
accacaaatactgcaattgtctcgaatttgactaaaactgccaagtctacgattggggta
tcactatctgtggaaaattctcaaaccctgagtgtattcgagtacataaggcaaagagca
aaggaggcagttggagcagcggaaactccttgtgggggttggtctgtaacacggttacgt
tctgctgctcatggaactctaaatgttcctggattgattttgggtgttggcccaaaaggg
ggacttggagaacatggtgatgctgtatctcgtcaattgattctgacaaaggtttcactt
gtggaaagacgccctgaaaactatgaggctgttattgttcgtcctttatctgcagtaagc
tcgcttgtccgatttgctgaggaaccccaaatgtttgctatagaattcaatgatgggtgc
cctattcatgtttatgcaagcacgtctcgtgacagcttacttgcagcagttcgggatgtt
ttgcaaacagaaggtcaatgcccagttcctatattaccaaggcttacgatgcctggtcat
cgtatcgatccaccttgtgggagagttcatctactagcaggaccacaacatcccattgcc
gatatggagagtgcatccatgcatttgaaacacttagctgctgcagctaaagatgctgtt
gctgaaggcggttcacttcctggttcaagagctaaactgtggcgtagaatcagagagttc
aatgcttgcattccatatagtggagttcctcctaacattgaagtgcctgaggtaactttg
atggccttgataacaatgctaccagctacaccaaatcttcctccagagtctcctcccctg
ccacctccttctcctaaagcagctgcaacagtaatgggtttcattgcatgtttacataga
ttattagcttcaagaactgcagcttcacatgtaatgtcattccctgctgctgttggaagg
attatgggtttacttagaaatggttcagagggtgtagcagctgaagctgcagggcttgtt
tcgactctgattggtggtggtccagtggatcctagttcattaactgattctaaaggagag
aggcatgccacaataatgcacacgaagtctgtcttgtttgctcataatggttacgttatt
atccttgcgaacagattgaaacctatgtctgtatcacctttactatcgatggctgttgtt
gaagttctagaggctatgatatgtgaaccacatggcgaaacaacccagtacacggtgttt
gttgaattgttacgacaagtagcaggtttacggcgtcgcttgtttgctttgtttgctcat
cctgctgaaagtgtaagagaaacagttgctgtgatcatgcgtactattgcagaagaagat
gcagttgcagcagagtccatgcgtgatgctgctttgcgagatggtgccttgctgaggcat
ttattacatgctttttaccttcctgctggtgagcgacgtgaggttagtcggcaacttgtt
gctctttgggccgactcctatcaaccagctctggatctattgtctagggttctgcctcct
ggccttgttgcttatttgcacacacgttctgatggagttcaatctgaagatgctaatcaa
gaaggttcactggttagtaggagacagagacgcttgcttcagcagcggagaggtcgtgtc
ggtagaggaattacatctcaagatcaatctctgccttctgttaataattatgaagttggt
gatccagtgagacaggcaaattctggtggttttaaaggatcagataactatcatagatct
gctgtggatccacattctggacaaccttctactgttcacactattgaaagtttgtccagg
gatgttcagtctgtaggattgtctcaaaatggccaaggacttccttcagctgatttacct
tctatcaatatgcatgacactgcagagcctggtgcttctaatttagttgattcagatgtt
catggggctagtccccagagcacaggccttccagctcctgcacaggtagttgtggagaac
actcctgttggttctggtcgtctactctgtaactggcctgaattctggcgagcttttagt
cttgatcacaatcgtgcagatctagtctggaatgagcgcactaggcaagaacttagggag
gctttgcaggctgaggttcataaactagatgtagagaaggaacgtactgaagatattgtt
ccaggaggggctagtacagagatgaagactggacaggatagtgtgccacagatatcttgg
aactattctgagttctctgtgagctatcctagcttgtccaaagaagtatgtgtaggtcaa
tattatctgcgtctgctgcttgacagtggcagcagtggcagggcacaggattttccactt
cgtgatcctgtagctttctttagggcactttatcatcggtttttatgtgatgcagacaca
ggacttactgtagatggtgctgttcctgatgaattaggcgcatctgatgattggtgtgat
atgggaagattagatggttttggaggaggaggaggttcttccgtaagggagctttgtgca
agagcaatggccattgtctatgaacaacactgcaacacaataggtccttttgagggtact
gcacatattactgttcttctagataggacagatgatagagctttgaggcatcgccttctc
ctccttttgaaggttttaatgaaggttctgtctaatgtggaggattgtgttgtggttgga
gggtgtgtgttggccgttgatctgctgacagtggttcatgaagcttcagaaagaactgct
atccctttacaatctaatttattggctgctactgcatttatggaaccacttaaagaatgg
atgttcatcaacaaggatggtgcacaagtgggacctgtggagaaggatgccattagaagg
ttttggtcaaagaaagaaattgaatggacaacaaaatgctgggcatctgggatggtggaa
tggaagagattgcgtgatattcgtgaacttcgttgggcattagctgttcgtgttcctgtc
ctcacaccatcccaggtaggagatgcagcactgtctatattacatagcatggtatctgca
cattcagacttagatgatgctggagagatagttacccctacaccaagggtgaagcgtatc
ttgtcaagtcctcgttgtcttccacatattgcgcaggctatgctttctggggaaccaaat
attgtggaggctgctgcatcattgctgaaagctgttgttacgagaaatcccaaggccatg
atacgtctttacagcacaggcacattctattttgcattggcataccctggttccaatctc
ttttccattgcacaactgtttgctgtgactcatgtccatcaagcattccatggtggtgaa
gaagctgctgtttcctcatcattgcctctggcaaaacgcagtgtgttgggtgggcttctc
cctgaatccttgctctatgtactggagcgtagtggtccagcggcatttgcagctgcaatg
gtttccgattctgatactccagaaattatttggacacacaaaatgcgagcagaaaatctg
attcgtcaggttttgcagcatctgggtgattttacccagaaattgtcacagcactgtcat
tttctatacgagtatgcccccatgccaccagtaacatacccggagctaagagatgaaatg
tggtgccaccgttactaccttcgaaacttatgtgatgagattcgctttcccaattggcca
attgttgaacatgttgagtttctgcagtcattattggtaatgtggcgtgaagagttaaca
cgaagacctatggatctatctgaagaagaagcttgtagaatattagaaatatcactagaa
gatgtctcaagcgatgatgccaaaaagcagcgttcttttgagacttctgaggagataact
agcatatcaaagcagattgagaatattgatgaagaaaagctcaagcgccaatatagaaaa
cttgcaatgaaataccaccctgacaaaaatcctgagggaagggagaagtttctcgcagtg
cagaaagcttatgaacgccttcaggccaccatgcaaggcttgcaaggtcctcagccttgg
aggttgctgcttttattgaaaggacagtgcatcttgtacagaagatatggagatgtactg
gagcctttcaaatatgctggctatcccatgttactgaatgcaattactgtggatgaagtt
gacaacaattttctttcttctgatagagctcctttgcttactgcagcatcagagcttact
tggttgacgtgtgaatcttcttcattaaatggtgaggagcttgttagggatggagggata
caactgcttgcaactcttctttctcgttgcatgtgtgtggttcaaccaactacttctgca
agtgaaccatccgccattattgttacgaatgtgatgcgaaccttttctgttttgagtcaa
tttgaaagtgccagggctgagatgcttgaattaactggactagtaaatgacattgtgcac
tgcacagaacttgagcttgcacctgatgctgttgatgctgccctccagactattgcccgt
gtttctgtgtcctctggattgcaagatgccttattgaaggcgggtgtgctttggtacctt
ttaccgttgttgcttcagtatgactcaactgccgaggaatctgataagacagagtcacat
ggtgttggttctagtgttcagattgcaaaaaatatgcatgcagttcgagcatctcaggcc
ttatccagactcagtggcttgtgtactgatgggagttcaacaccttataatgcagcagct
gctgatgcacttagagctttactaactcctaaacttgcaagtatgttgaaagatcaattc
ccaaaagacctactatccaaattaaacacgaatttggagtctccagagattatctggaac
tcatcaactcgagcagaattactgaaatttgttgatcagcaacgtgctagcctgggtcct
gatgggtcatatgacttgaaagattcacaagtgtttttgtacgatgcactgtccaaagaa
ctcttcattggcaatgtttacttgagggtctacaatgatcagccagagtttgagattagt
gaaccagaagcattctgtgttgctctaattgatttcatatcatttttagtccaaaaccaa
ttttctgtaggctctgatgctcagaagaagcttgattccagtagctcatctcttgaaaca
tcagagattcaaaatagtactgcagatgaatctataaatggacacgtgatggatgattca
tcagcagtctcagatggaaaatcagcagatagagaggagttggaactggtcaaaaacctt
aaactgggattgacatcacttaagaacttattgacaagtaatccaaatttggcgtccata
ttttcttctaaagagaagctactgcctctctttgaatgtttttcggtacctgttgcacca
gaaagcaacattcctcaactttgccttggcgttctgtctctcctgactacatatgctcct
tgcttggaggctatggttgctgatgggtccagtcttcttcttttgctacaaatgcttcac
tctgctccaacttgccgtgaaggggttcttcatgttctttatgctttggctagcactcca
gaacttgcttgggcagctgccaagcatggtggagttgtgtacattctggaactcctcttg
cctttgcaaaaagatattcccttacaacagagagcagcagctgcctctttattgggaaag
cttgttggtcagccaatgcatgggcccagagttgcgataaccctggcaagatttcttcca
gatggcctggtatcagttgttagggatggccctggtgaggctgttgtatctgcacttgaa
ctaacaacagagacaccagagcttgtatggacccctgcaatggcagcatctttatctgca
cagattgccactatggcatctgacttgtatcgtgaacagatgaaaggtcgtgttgttgat
tgggatgttcctgagcaggcttctggacaacaggaaatgagagatgaaccacaggttggt
ggaatctatgtgagactgttccttaaggatcccaaatttcctctaagaaatccaaagaga
ttcttggaagggctactggatcaatatttatcatccattgcggccacacattatgatata
caagctgttgatcctgagcttcctttacttctttctgctgctttggtttctttgctgcgt
gtgcaccctgcacttgcagatcatgttgggtatcttggatatgtacccaaacttgtggct
gctgtggcctatgagggaaggcgagaaacaatgtcatcagaggaggtgcaaaatggcaac
tatgcggataaaacatatgaatctgatgatggaactacgccacctgcacaaactccacag
gaacgtgtgcgccttagttgtttgcgtgtcctacatcaacttgcagcgagtacaatatgt
gccgaggccatggcagcaactagtgtaggaacgccgcaggttgttccacttctaatgaaa
gctattggatggcaaggtggaagcatacttgcccttgagacattaaaacgagttatagtt
gccggaaatcgtgcacgggatgcattagttgcccaaggactgaaggtgggtcttgtggaa
gtacttcttggccttctggactggagggctgggggaaggaatggactttgctctcagatg
aagtggaatgaatcagaagcatctattggcagggtgcttgcagttgaggttttgcatgca
tttgcaacagaaggagcacattgtaataaagtgcgcgagatattaaatgcctctgatgtt
tggagtgcctataaagaccagaaacatgatctcttccttccttcaagtgcccaatctgct
gctgcaggtgttgctggtttaattgagaattcatcatcaagactgacttatgcccttaca
gctcccccactgcaacctgctcaagcaagaccacctgcatctaccacattggactcaaat
gggaagcaggatcctttttcatga
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integrated database retrieval system
