Ricinus communis (castor bean): 8280110
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Entry
8280110 CDS
T01087
Name
(RefSeq) uncharacterized protein LOC8280110 isoform X1
Organism
rcu
Ricinus communis (castor bean)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
zf-HC5HC2H_2
TDBD
zf-HC5HC2H
PHD_2
PHD
Motif
Other DBs
NCBI-GeneID:
8280110
NCBI-ProteinID:
XP_015575082
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All DBs
Position
5:complement(28014483..28028890)
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AA seq
2123 aa
AA seq
DB search
MENSREVKCSSSTLQSQEARDQTGRNPGQYFISHAGQDLRTQVHGRMLDPTFPLSPCSSS
HADLGNSFLALLSGPASLLQFDFQEFSNSKPLNTSIKLPIESSIAVSPTGSQIPPTSSWK
PSENGSYQNMQSGADLCPLISSRATTTSNFGSNSVFPNGLPAASISLQGSDLAKTVLHDA
VLGNEKLKDFTYLRGELHNISDANAIKLQNVNNQMPQKLPLAAESSASINSSRFPSGCPR
VFCMDRSGDLLLSNTGLLGILCSCHCFHMSVSKFCEHSGLWNINPGDAIHMDSGETIAQW
RKLYFQKFGIRVPEDQSGWDWPEGLPLAASLMRSGVSMSSMPKKTACINLVAPSEALARS
GRPLSDAVVKNFLADQNPVIDALHDEQQRNGQDGNKFYLKGLVGTSLSNSCSVGDNHVTD
CSISRCSTMPNFAGRGPENVCQSMYIDAILKSGSLATAHPALQNCRALVKSSDVGRGKDA
QDGATMEKDGSPSSIELKLGQPYQHGQSPGNPVLPVIGPQFYNTLVSPHKPFSQEQLINN
VSCQGEEESRRCLPHAAHLSDSTIRRKQDHLRYGNSGNDRTVDSTELEKLNMAKPSVVSL
FKHYALPEGTPHSKATNSFEYVMSERRHCESHAVKFDSNNFSWNGGNSLDEQCIVPESVF
LKPADNGKEVGCLANSSYIKKASGSNMQKWMGNPSSYTRAMNDATYSNFSFMHDKNRNLY
HSSNVPPDVSDAANFSVYLQKGPCFGNGGLLDHAVLTSMDSRQILSSQSVPKVSPSSTST
CIPGLTLAMLNRESICMGPYLLDDNQKLLALGQLLDLSKQQHAMSSFGRKIEQGNCSNSS
NIKAQHSFVEPSVSEEQTHVHDLTRKQEVSEVVMKLDQPCPPSKTVDDVDKSTSGTGLNR
LCNFSTFTQGMPFQFKEFGMQCQLSHSALQKEQSLRLDRCQNNIIWSNEHETCCQRTLCF
QYNCTCAAQTKCIEGNCNLRGGKPNPLREQNGSMSCKTPMLIASQLAKDHMASKVNAISF
DQCGMLKGELPKNATFHTSQWKDVPRKLKRVCEVACAKQSADTSLKREYKLGQLGDNAAN
CFDGAVAAAASFKEQDMSNISSGCSTPAVTQASTEFTNVESSTVVGNSGCINNLVVDEGS
GIDKCWSSDDAFESDRSADFHGSTCKKNLVYMGSHNTAVNKSSRSLLDEVKLMDSLTWKK
GQNQKHNGITVHGKNNHSQEFDRGLKTGKRKREIIPKVSDAPLGTAAPMLHGKYPEYGGT
ADWPCLSENVQMVSAGQESSQTSGAHCVKANPKDGNCMQSVSKSLSRNRDLHRLYNAGDG
EANPHNDINHDDNSCEVLEILGRKKFRSIHAADLSIQFQRQDCTQAVGEKAGKYDSLDRI
KASSAQHLCHGKAKPVACGKYGEIVNGNLNGDVSKPAKIVSLDKVLKTAQKCSLPKICKP
GLTSSKEIGTNFSWSNACFGKFSNLTKEKEHGRNVALLCKDMNVRTSLEKRSNSFANYDE
QSADEVSMLEKSEGKNGRGCVILDTIAHAQSRSKYRETRKRSLYELTLKGKSSSPKMVSR
KKNFKYVPKMKLGKTLRNSEKSHDNGSQKVDPKRCAREQKHLSITDMDSFCSVCRSSNKD
EVNCLLECRRCSIRVHQACYGVSRVPKGHWYCRPCRTSAKDIVCVLCGYGGGAMTLALRS
RTIVKGLLKAWNLEIESVAKNAISSPEILHHEMSMLHSSGPGPENRSYPVLRPVNIEPST
STVCNKDVQNHLDILPNSLGHLSNLKVNNSITAGVLDSTVKQWVHMVCGLWTPGTRCPNV
NTMSAFDVSGASCPRANVVCSICDRPGGSCIQCRVANCSIQFHPWCAHQKGLLQSEAEGV
DNENVGFYGRCVLHATYPTIESACDSAIFEAGYPAEKEVSCARTEGYKGRKRDGFWHNTN
SQSKGKSGCLVPQEQFDAWVHINGQKSCAQGILKLPMSEKEYDCRKEYTRYKQGKAWKHL
VVYKSGIHALGLYTARFISRGEMVVEYVGEIVGLRVADKRENEYQSGRKLQYKSACYFFR
IDKENIIDATHKGGIARFVNHSCLPNCVAKVISVRNDKKVVFFAERDIYPGEEITYDYHF
NHEDEGKKIPCFCNSKNCRRYLN
NT seq
6372 nt
NT seq
+upstream
nt +downstream
nt
atggagaactcacgggaggtcaaatgtagctcctccacattgcaatcacaagaagctcga
gatcagacggggaggaatccaggtcaatattttatttcacatgctggacaagacctgaga
acgcaagtacatggaaggatgctggatcccacatttcccctaagtccctgcagctcaagc
catgctgacctaggcaattcatttctagctctcctatctgggcctgcatctcttttacag
tttgatttccaggaattctcaaattctaaaccactcaatacctctattaaactgcctatt
gaaagcagtatagctgttagtcctactggaagtcagattccacctacatctagttggaaa
ccatcagaaaatggaagctatcaaaacatgcaaagtggagctgatctttgcccacttatt
tcatcaagagcaactactacttccaattttggtagcaattctgtatttccaaatggtctt
ccagctgcaagcattagtcttcagggttcagacctggctaaaacagttcttcatgatgca
gttcttggtaatgagaaattaaaagattttacttatctgagaggggagctgcataacata
tccgacgcaaatgccataaaactccagaatgtgaacaatcaaatgccacaaaagttgcca
ctagcagcagagtcttctgcttcgattaattcatctagatttcctagcggatgcccgcgt
gttttttgcatggataggagtggagatttactactcagcaatacaggacttcttggcatt
ctttgctcatgtcattgcttccacatgtctgtctccaaattctgtgagcattcgggttta
tggaatattaatcctggtgatgctattcatatggacagtggagagacaattgctcagtgg
cgcaagctatacttccagaaatttgggattagggttccagaagatcagagtgggtgggac
tggcctgaaggattaccattggctgctagtttaatgagatctggtgtgtctatgtccagc
atgcccaagaaaactgcctgcattaatttggttgccccatctgaagctttagcaaggtct
ggacgacctttaagtgatgctgttgtaaagaactttcttgcagaccaaaatccagttatt
gatgctttacatgatgaacaacagagaaatggtcaggacggtaacaaattttatctcaaa
ggtttagtaggcacttcgctaagcaattcatgcagtgtgggggataaccatgtgactgat
tgctctatctctaggtgctcgacaatgcctaattttgctggcagaggaccagaaaatgta
tgtcagtccatgtatattgatgctattttgaagagtggaagtttggcaactgcccaccct
gccttgcaaaattgtagagcccttgttaaaagttctgatgttggcagaggtaaagatgca
caggatggtgctacaatggaaaaggatggctctccctcgagcatagagttgaagcttggg
caaccctatcagcacggtcaatctccaggaaatccagttctaccagtaatagggccacag
ttctataacacacttgtcagtccacataagccattttcccaagagcagctgattaataat
gtcagttgccagggagaagaggaatcaagacgatgtcttccccatgctgctcacctgtct
gattccaccataagaaggaaacaagaccacttgagatatgggaacagtggaaacgataga
actgtagattctactgaactagagaaacttaatatggctaagccttcagtggtttcgcta
ttcaaacactacgctttgcctgaggggaccccacattctaaagctactaatagttttgag
tatgttatgtctgagagaagacactgcgaatctcatgctgtcaaatttgactctaataat
ttttcctggaatggtggcaatagtttggatgagcagtgtattgtccctgagtcagttttt
ctcaaacctgctgacaatggtaaagaagtgggatgtcttgctaatagctcttatatcaaa
aaggcttcaggatctaatatgcagaagtggatgggaaatccaagctcatacactagagct
atgaatgatgccacttattctaacttttcatttatgcatgacaaaaaccgtaatctatat
cactcatctaatgtgccaccagatgtatctgatgctgcaaacttctccgtctatcttcag
aagggtccttgttttggaaatggtggacttctagatcatgctgtccttacatccatggat
tctaggcaaattttgtcatcacagtcagttccaaaagtttctccctcatctacttcaacc
tgcattcctgggctgactctagcaatgctgaaccgagagagcatttgcatgggaccttat
ttgcttgatgacaatcaaaaattacttgcactgggtcagttattagacttatcaaagcaa
cagcatgcaatgtcttcctttggaaggaagatagaacaaggcaactgtagtaattcctct
aatattaaagcacagcattcttttgttgaaccgtcagtgtctgaagaacaaacgcatgtg
catgacctcaccaggaaacaagaagtttctgaagttgtgatgaaactagaccaaccttgt
cctcctagtaagacagttgatgatgttgacaaatccacatctgggacaggtttgaacagg
ttgtgcaatttctcaacattcacacaaggtatgccttttcagtttaaagaatttggcatg
cagtgtcagctttctcacagtgctcttcaaaaggagcagtcattgaggcttgatagatgt
caaaacaacatcatttggtcaaatgagcatgaaacctgctgtcagagaacactttgtttt
cagtataactgtacctgtgctgcccagacaaaatgtatagaaggaaattgtaatttaaga
ggtggaaagcctaatcccctgagagaacaaaatggaagtatgagttgtaaaacccctatg
ttaattgcttcacaacttgctaaagatcacatggcttcaaaagtaaatgcaatttccttt
gatcaatgtggaatgttgaagggggagctacctaagaacgctacttttcatacttcacag
tggaaagatgtgccaagaaagttaaaaagggtttgtgaagtggcatgtgcaaaacaatca
gcagatacatcacttaaaagagaatataaattaggtcagcttggagataatgctgcaaac
tgttttgacggagcagttgctgcagcagcctctttcaaagaacaagacatgtctaatata
tcttctggttgctctacccctgctgttactcaggcatccactgaatttaccaatgtggag
tcttcaactgttgttgggaattctggatgcattaataatcttgtagttgatgaagggtca
ggcattgataaatgctggtcgtcagatgatgcctttgaaagtgacagaagtgctgacttc
catggctccacttgtaagaaaaaccttgtatatatgggatctcataatactgctgttaac
aaatcatctcgtagtcttcttgatgaggttaagctcatggattccttgacatggaagaaa
ggccaaaatcaaaaacataatgggattactgtccatgggaaaaacaatcactcacaagag
tttgatagaggcctgaaaactgggaagagaaagagagaaataataccaaaggtgtcagat
gcaccattaggcactgcagctcctatgctccatggtaaatatcccgagtatggtgggact
gccgattggccctgtttatctgaaaatgtgcaaatggtttcagctggccaagaatcatct
cagacttctggtgctcactgtgttaaagcaaatcccaaagatggaaattgtatgcaatct
gtcagcaaatcactatctcgtaatagagatcttcacaggctttacaatgcgggagatgga
gaagctaatcctcacaatgacataaatcatgatgataattcttgtgaagtccttgagatc
ttaggcagaaagaaattcagaagcattcatgctgctgatcttagtattcagtttcagagg
caagattgtacccaggcagttggtgagaaagctgggaagtatgactcactggatcgtatc
aaggcatcttcagctcagcatctttgtcatgggaaagcaaaacctgttgcatgtggtaag
tatggcgaaatagttaacggtaacttgaatggagacgtatcaaagccagctaaaattgtc
tctcttgataaagttcttaaaactgcacaaaaatgttcacttcctaaaatctgtaaacct
ggactaacttcctcaaaggagataggaactaactttagttggagtaatgcatgctttggt
aaattctccaacttgacgaaagagaaagaacatgggaggaatgttgctttgttatgcaag
gacatgaatgttcgcacttctctggaaaaaagaagcaattcttttgccaattatgacgag
caatctgctgatgaggtttcaatgctagagaagagtgaaggtaaaaatgggagaggttgt
gtaatactggacaccattgctcatgctcagtcaagatcgaagtatagggaaactcgcaag
cgtagcctttatgagttgacactaaaaggaaagagttctagtcctaaaatggtttccaga
aagaagaatttcaaatatgtgccaaaaatgaagctgggaaagacattgaggaattctgaa
aaaagtcacgataatggatcacagaaagtggatcccaaaagatgtgctagagaacaaaag
cacctatcaatcacagatatggattcattctgcagtgtttgtagaagctcaaataaagat
gaagttaattgcttattggagtgtaggcgatgttcaatcagagtacatcaggcttgctat
ggtgtttccagagtgcctaaaggccactggtattgcagaccttgcaggacaagtgcaaaa
gatattgtctgtgttctatgtggttatggtggtggagctatgactcttgcgcttcgaagt
cgcacaattgtgaaaggccttttaaaagcttggaatcttgaaatagagagtgtggctaaa
aatgcaatttcttcacctgaaattctgcatcatgaaatgagcatgctgcatagctcagga
cctggacctgaaaataggtcataccctgttctaagacctgtaaacattgagccatcaact
tcaactgtttgcaacaaggatgtgcagaatcatttggatatattaccaaactccttgggc
catcttagtaatctaaaagtgaataacagcattacagctggagtacttgattcaacagtt
aagcagtgggttcacatggtttgtggcctttggactcctgggacacgatgtccaaatgtg
aataccatgagtgcttttgatgtctcaggtgcttcgtgtcctagagcaaatgtggtatgc
tctatatgtgatagaccaggtggttcatgcatacagtgcagggttgcaaattgctctatt
cagttccatccttggtgtgctcatcagaagggactactgcaaagtgaagctgaaggtgtt
gataatgaaaatgttggcttttatggaagatgtgtgcttcatgcaacatacccaacaatt
gaatctgcctgtgattctgccatctttgaagcaggttatccagcagaaaaagaagtaagc
tgtgctaggactgagggctataagggccgcaaacgggatggcttctggcataatactaac
agtcaatcaaaaggaaagagtggatgccttgttcctcaggagcagtttgatgcttgggtt
cacattaacgggcagaagtcctgtgcacaggggattttgaagctgccaatgtcagaaaag
gagtatgattgtcggaaagaatatacccgctacaaacaaggaaaagcttggaaacatttg
gttgtttataagtctggcatacacgcccttggcctttacactgctcgatttatttctcgt
ggagaaatggtggttgagtatgttggtgagattgttgggctacgggtagctgataaaaga
gaaaatgagtaccagtctggcagaaaacttcagtacaaaagtgcttgttacttcttcagg
atagataaagagaatattattgatgcaacccataaaggcggaattgctcgctttgtcaat
cattcgtgcttgccaaactgtgtggccaaagttatttccgtgaggaacgacaagaaggtt
gtcttttttgctgagagagacatatatcctggggaagaaataacatatgactaccatttt
aaccatgaagatgaaggtaagaagataccctgcttttgtaattcaaagaattgcaggcgc
tatttgaattga
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