Ricinus communis (castor bean): 8280606
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Entry
8280606 CDS
T01087
Name
(RefSeq) ABC transporter B family member 15-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
8280606
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rcu02000
]
8280606
04147 Exosome [BR:
rcu04147
]
8280606
04090 CD molecules [BR:
rcu04090
]
8280606
Enzymes [BR:
rcu01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
8280606
Transporters [BR:
rcu02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
8280606
Exosome [BR:
rcu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
8280606
CD molecules [BR:
rcu04090
]
Proteins
8280606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_29
SMC_N
AAA_22
RsgA_GTPase
AAA_21
AAA_15
ABC_ATPase
AAA_16
Zeta_toxin
AAA_30
AAA_23
AAA_28
Motif
Other DBs
NCBI-GeneID:
8280606
NCBI-ProteinID:
XP_025012814
LinkDB
All DBs
Position
5:29823233..29830304
Genome browser
AA seq
1262 aa
AA seq
DB search
MGSSEKNSSNMMIIKKKKKKSNNIGSIKTIFMHADYADWLLMILGFIGSVGDGFSTPLNL
FVTSKLMNNLGGASPSATDFSHNINKNALTLCYVAFGQWLVCFLEGYCWTRTGERQATRM
RARYLKAVLRQDVGYFDLHVTSTAEVITSVSNDSLVIQDVLSEKVPNFLMNASMFFGCYL
VGFLLLWRLAIVGFPFIILLVIPGLMYGRTLMGLARKMREEYNKAGTIAEQAISSIRTVY
AFVGESKIISAYSSALECSVKLGLKQGLAKGLAIGSNGVVFAIWSFMSYYGSTMVMNHNA
RGGTVFVVGASIAVGGLALGAGLSNVKYFSEACSAGERIMEVIRRVPKIDLENMEGEILE
NVRGEVEFKHVEFAYPSRPESIIFKDFSFKISSGMTVALVGGSGSGKSTVIALLQRFYDP
LGGEILLDGVGIDKLQLKWLRSQMGLVSQEPALFATSIKENIFFGKEDATMEEVVEAAKA
SNAHNFICQLPQGYDTQVGERGVQMSGGQKQRIAIARAIIKAPRILLLDEATSALDSESE
RAVQEALDKAAVGRTTILIAHRLSTIRNADLIAVVQNGQVMETGSHDELMENEHGLYTSL
VRLQQTEKGIIIEDDDNVSSSTLTSKIDVNNSSSRRLSLVSRSSSANSSPPTRPSLAGEQ
NVQIEVEKFKVPSFRRLLSMNLPEWKQASFGCLGAILFGGVQPVYAFAMGSMISIYFLTD
HNEIKEQMRIYSLCFLGLSVFSLIINIVQHYNFAYMGEYLTKRIRERMLSKILTFEVGWF
DQDENSSGAICSRLAKDANVVRSLVGDRMALVVQTVSAVVIACTMGLVIAWRLAVVMIAV
QPLIIICFYCRRVLLKSMSQKAIKAQDESSKLAAEAVSNLRTVTAFSSQDRILKMLEKSQ
EGPQRESIRQSLFAGIGLGTSQCLMSCTWALDFWYGGRLISKGYISSKALFETFMILVST
GRVIADAGSMTTDLAKGADAVGSVFAVLDRYTRIEPEDPEGYEPEKIMGHIEIRDVDFAY
PARPNLIIFKGFSIKIEAGKSTALVGQSGSGKSTIIGLIERFYDPTRGTVKIDGRDIKSY
NLRLLRKKIALVSQEPTLFACTIRENIMYGTSDKIDESEIIEAAKAANAHDFIAGLKDGY
DTWCGDRGVQLSGGQKQRIAIARAILKNPAVLLLDEATSALDSQSEKVVQDALERVMVGR
TSVVVAHRLSTIQNCDMIAVLDKGQVVEQGTHSSLLSRGPTGAYFSLVSLQRTPPNSSHI
FN
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atggggagttcagagaaaaacagcagcaacatgatgatcatcaagaaaaagaagaagaag
agtaacaatattgggtctattaagacaatattcatgcatgcagattatgcagattggttg
ttgatgattcttgggtttattggatctgttggtgatggtttctctaccccacttaatttg
tttgttactagtaaattgatgaataatcttggtggtgcttctccttctgctactgatttc
tctcataacattaataagaatgcactgactctttgttacgtggcttttggacaatggctt
gtttgttttcttgagggatattgctggacaagaacaggagagagacaagctacaagaatg
agagcaaggtatttgaaagcagtattaagacaagatgtgggttactttgatttgcatgta
acaagtacagcagaggttatcacaagtgtttctaatgatagccttgtaattcaagatgtt
ctgagtgaaaaggttccaaacttcttgatgaatgcttcaatgttcttcggctgctatcta
gttgggttcttgttgctttggaggctagcaattgttgggtttccttttattattcttctg
gtaattcctggtctaatgtatgggaggactttaatgggattggctagaaagatgagggag
gagtacaataaggcaggaacaatagcagagcaggcaatatcttctatcaggactgtatat
gcctttgttggcgagagcaaaatcatatctgcatattcttcagctcttgaatgttcagtg
aagctggggctcaagcaaggcctggctaagggcttggccattggcagtaatggggttgtt
tttgctatttggtcttttatgtcttactatggcagcacaatggtcatgaatcataatgct
cgtggaggaactgtttttgtagttggtgcttctattgctgtaggtggattggcccttggt
gctggtttatcaaatgtgaagtacttttcagaagcatgttcagctggagaaaggataatg
gaagtgataagaagagtgcccaaaatagatctagagaacatggaaggtgaaattttggaa
aatgtaagaggtgaagttgaattcaagcatgtagaatttgcatacccatcaaggccagaa
agcataatctttaaagattttagcttcaaaatttcatcaggaatgactgtagccttagtg
gggggtagtgggtcaggaaaatcaacagtaatagcactgctgcaaagattttatgaccca
cttggtggggagatacttctcgatggggtgggaattgacaaattgcaactcaagtggcta
aggtcacaaatgggtttagtgagccaagagccagcactatttgcaactagcattaaggag
aacatattttttggcaaagaagatgccactatggaagaggttgttgaagctgccaaagct
tccaatgcccataatttcatatgtcagttgcctcaggggtatgacacccaggtcggcgag
cgaggagttcaaatgtcaggaggacaaaagcaaagaattgccattgcaagagcaataatc
aaagcaccaagaattctccttcttgatgaggcaacaagtgcattagactctgaatctgaa
cgtgcagtccaagaggccctagacaaggctgccgtggggcggaccacaatcctcatagcg
catcgtctctccaccatccgaaatgctgacctgattgctgtggtacaaaatggccaggtc
atggagacaggttctcatgatgaattaatggaaaacgaacacggattatacacatcatta
gtccgcctacagcaaacagagaagggaataatcattgaagacgatgataatgtgtcctct
tccacattaacctcgaaaatagacgtgaataattctagcagtcgaagattatcattggtg
agtaggtcaagctcagccaactcatcgccaccaactcgaccttcacttgccggagaacaa
aatgtacaaatcgaggtggaaaaatttaaggtaccctcatttcgaaggctgctaagtatg
aacttgccggagtggaaacaggcaagctttggatgtctaggtgcaattttgtttggtggt
gtgcaacccgtatatgcgtttgcaatgggatcaatgatatccatttattttttgactgac
cataatgagattaaggagcagatgaggatttactcattatgctttttagggttgtcagtc
ttctcattgatcattaacattgttcagcattataattttgcgtatatgggtgagtatttg
acgaaaaggatcagagagagaatgctttcaaagatactcacatttgaagtcggatggttt
gatcaagatgagaattctagtggtgcaatttgctctagacttgccaaagatgccaatgtg
gtgagatctctagtgggtgacagaatggctcttgttgtacaaacagtctcagctgtagtc
atagcctgcactatgggccttgtcattgcttggaggcttgctgttgtgatgattgcggtc
caacctctcattattatctgtttttattgccggcgtgttctacttaaaagcatgtctcag
aaggccatcaaagcccaagatgagagcagcaagcttgctgcagaagcagtgtccaacctc
cgaacagtcactgccttttcctcccaagatcgcatcctgaaaatgctcgaaaaatcacag
gaaggcccacaaagagagagcatcagacaatcattgtttgctggaattgggcttggcacc
tcgcagtgcctgatgtcatgtacgtgggcccttgacttttggtacggaggaaggctcatt
tcaaaaggctacatctcctctaaagccttattcgaaaccttcatgatcttggtgagcacc
ggccgtgtcatagcagatgccggaagcatgacgaccgacctcgccaagggtgcggatgcc
gttgggtcagtctttgctgtactagatcggtatacaagaattgagccggaagaccctgaa
gggtatgagcctgaaaagataatgggccatatagaaataagagatgtggattttgcatat
ccagcaagacccaatcttatcatcttcaaagggttctcgattaagattgaagcagggaaa
tcaacagcattggtaggacaaagtggatccgggaagtcaacgatcattggattaattgaa
agattctatgatccaactagagggactgtaaaaatagacggtcgtgatattaagtcatat
aacctgagattactaaggaagaagatagctctagttagccaagagccaacattatttgct
tgcacaataagggaaaacattatgtatggtacatcagataaaattgatgaatcagaaatc
atcgaagccgctaaagcagcgaatgctcacgatttcatcgccggattgaaagatgggtat
gacacgtggtgtggagatagaggagtgcaattatcaggtggtcagaaacaacgcattgcg
atagcgcgtgcgatactgaaaaatccagcagttctactattagatgaagcgactagtgca
cttgatagtcagtcggagaaagtggttcaagacgcacttgagcgcgtgatggttggaagg
acaagcgttgtcgttgcacataggcttagtactatacagaattgtgatatgattgccgtt
ttggacaaaggccaggtcgttgagcaagggacccactcatccttattgtcaagagggccc
actggagcttacttctcattggttagtcttcaaaggaccccacctaacagcagccatata
ttcaactga
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