Ricinus communis (castor bean): 8280718
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Entry
8280718 CDS
T01087
Name
(RefSeq) putative multidrug resistance protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
8280718
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rcu02000
]
8280718
04147 Exosome [BR:
rcu04147
]
8280718
04090 CD molecules [BR:
rcu04090
]
8280718
Enzymes [BR:
rcu01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
8280718
Transporters [BR:
rcu02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
8280718
Exosome [BR:
rcu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
8280718
CD molecules [BR:
rcu04090
]
Proteins
8280718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
AAA_29
Zeta_toxin
ABC_ATPase
RsgA_GTPase
AAA_16
AAA_30
AAA_15
AAA_22
nSTAND1
DLIC
Motif
Other DBs
NCBI-GeneID:
8280718
NCBI-ProteinID:
XP_025013797
LinkDB
All DBs
Position
9:complement(8690334..8695567)
Genome browser
AA seq
1256 aa
AA seq
DB search
MGGKNSMFRYADGIDKLLMFFGALGSIGDGLQYPVTMYVLSHVINEYGSPNSPLTNETVD
RYSLKLLYVAIAVGLSAFIEGMCWTRTAERQISRMRTEYLKSVLRQEVGFFDTQEAGSST
TYQVVSTISNDANAIQVAICEKIPDCLTFMSTFVFCLVFSFILSWKLALAALPLTMMFII
PGLVFGKLMMDVIMKMIESYGIAGGIVEQAISSIRTVYSYVAESQTIDNFSGALQKTMEL
GIKQGFAKGLMMGSMGIIYVGWAFQAWVGTYLVTSKGEKGGSIFVAGINVIMGGLSILGA
LPNLTAITEATVAATRIFEMIDRSPSIDSEDKKGKALSYVRGEIEFKDIYFSYPSRPDTP
ILQGLNLTIPAGKTVGLVGGSGSGKSTIIALLQRFYDPIEGEVLLDGYKIRRLQLKWLRS
QIGLVNQEPVLFATSIKENILFGKEGASMDDVITAAKAANAHDFIVKLPDGYETQVGQFG
FQMSGGQKQRIAIARALIRNPKILLLDEATSALDTQSERLVQEAIDQASKGRTTITIAHR
LSTIRTANLILVLQAGRVIESGTHEKLMQINDGQGGEYFQMVQLQQMTAENEAPSDFGYN
NDGRNFHKTNAAPSPISIRSSAQNTPVLYPFSPAFSFGTPYSYSVPYDPDDDSVEDDMKR
LDYPAPSQWRLLKMNAPEWGRAFIGCLAAIGSGAVQPINAYCVGSLISNYFRIDKSDIRH
RSRILSLVFLGIAALNFTSSLLQHYNFAVMGEKLTKRVREKLLEKLMTFEIGWFDDDENT
SAAICAKFATEANMVRSLVGDRMSLLVQAVFGSIFAYALALVLSWRLALVMIAVQPLVVG
SYYSRSVLMKSMSGKAQKAQKEGSQLASEAVINHRTITAFSSQKRILGLFKDTLKGPKEE
SVKHAWLSGLGLFSAQFFNTASTALAYWYGGRLLTEGQISAEHLFQAFLILLFTAYVIAE
AGSMTSDLSKGGNAIRSVFTILDRKSEIDPDSSWGLDIKKEIKGRVDLKNVFFAYPTRPD
QMIFKGLNLKIDAGNTVALVGPSGSGKSTVIGLIERFYDPTKGSILIDGQNIKNYKLRML
RSHIALVSQEPTLFAGTIRENIIYGKENATESEIRKAAVLANADEFISGMKDGYDTYCGE
RGVQLSGGQKQRIALARAIIKNPSILLLDEATSALDSVSESLVQEALEKMMVGRTCVVVA
HRLSTIQKSNCIAVIKNGKIVEEGSHNELVSLGRGGVYYSLIKGQSSSSSPYRLNK
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atggggggaaagaatagcatgtttcgatatgccgatggcatcgacaagttgttgatgttt
ttcggagctttgggcagcattggagatgggttgcagtaccctgtaacaatgtatgttctt
agccatgtgatcaatgaatatggaagccctaatagccccttgactaatgaaacagtagac
aggtattcgctcaagctgctgtatgttgcaattgctgttggactttctgcttttatcgaa
ggaatgtgttggacaagaactgctgagagacagatttctagaatgagaacagaatatctg
aaatctgttcttagacaagaagttggtttctttgacacacaagaagctggttcttccaca
acttatcaagttgtttctaccatctctaatgatgccaatgcaattcaagttgcaatttgc
gaaaagatacctgactgccttacattcatgtcaaccttcgtcttctgcctcgtgttttcc
ttcatactttcatggaaacttgcattggccgctcttcccttaacaatgatgttcattatt
ccgggacttgtatttggaaagctaatgatggatgtaataatgaagatgatcgaatcttat
gggattgctggtgggattgtagaacaagcaatttcttctataagaacagtatattcgtat
gtggcggagagccagacaatagacaacttcagcggtgcacttcagaagacaatggaacta
ggaataaaacaaggttttgctaagggcttgatgatggggagtatgggaataatatatgta
ggttgggctttccaggcttgggttggtacttatttggtaacttccaaaggtgaaaagggt
ggctccatctttgtagctggaatcaatgtcatcatgggaggactgagcattttgggtgca
ctcccaaatctaactgccatcacagaagcaacagttgctgctactcgtatttttgaaatg
atcgatcgaagtcctagtatagactcagaagacaagaaaggcaaggcattgtcttatgta
agaggagaaattgaatttaaggatatctattttagttacccatcaagacctgatacacca
atcttacaaggattgaatcttacaattccggctggtaagactgttggacttgtaggtggc
agtggctcaggaaagtctacgattatcgcattgcttcaaagattttatgacccaattgaa
ggagaggttttgttggatggttacaaaataaggagacttcagttgaaatggttgagatcc
caaattggtctggttaatcaagaaccagtcctctttgctacttctataaaggagaatata
ctgtttggaaaggaaggagcatcgatggatgatgtgataactgctgctaaagctgcaaat
gctcatgatttcattgttaagttgccagacggatacgaaactcaagttggtcaatttgga
ttccaaatgtctggtgggcaaaagcagcgaattgctatagcaagggctctcatcaggaac
ccaaaaatcttgctgctggatgaggcaactagtgcacttgatacacaatctgaaagacta
gtgcaagaggcaattgatcaggcgtccaaaggaaggacgacaatcaccattgcgcatcga
ctttccacaatcagaacagcaaacctgattctagttcttcaagcagggagagtaattgaa
tcgggtactcacgaaaagctaatgcaaataaatgacggacagggtggagagtacttccag
atggtgcagttgcagcagatgacagcagaaaatgaagctcctagtgattttggttataac
aatgatgggaggaacttccataagacgaatgctgctccaagcccaattagcataaggtca
agtgctcaaaacactccagtgctataccctttcagccctgcattttccttcggcacccct
tattcctattcagtcccatatgatcctgatgatgacagtgttgaggatgacatgaagcga
ttggattatcctgctccatcacaatggcgactgctgaaaatgaatgcacctgaatggggg
agagctttcattgggtgcttagctgcgataggctctggagcagttcaacccataaatgct
tactgcgtgggatcacttatatcgaattacttccgcattgataaatctgatatcaggcac
agatccagaatcttgtcccttgttttcttaggcattgctgctctcaacttcacctccagt
ctcctccaacattacaatttcgcagttatgggagaaaagttaacaaaaagggtgcgagag
aaactgctggaaaagcttatgacttttgagataggatggtttgatgacgatgaaaacaca
agtgcagcaatttgtgcaaaatttgccactgaagccaacatggtgagatcacttgttgga
gatcgaatgtcgttgctggttcaagcagtctttggttctatttttgcttatgcactagca
cttgtgctgtcatggagactagcccttgtgatgattgcagtgcaaccattagtcgttggc
agctactactcgaggagtgttttgatgaaaagtatgtctggaaaggcacaaaaagcacaa
aaggaaggaagccagttagcaagtgaggctgtaatcaaccacagaacaataactgcattc
tcttctcagaagagaatcttggggctattcaaagataccctgaaaggtcctaaagaggag
agtgttaaacacgcctggctctctggtcttggcctttttagtgctcagtttttcaacaca
gcttcaactgcattagcttactggtatggtgggaggctcctgacagaagggcaaatatca
gcggagcaccttttccaagcatttttgatactgcttttcactgcttatgtcattgctgaa
gctggaagtatgactagtgatttatctaaaggaggcaacgctatccgatcggtgtttacg
atcctggacaggaagagtgagatcgatccagatagttcatggggattagacattaagaag
gagataaaaggacgtgtggatctcaaaaatgtattctttgcatatccgaccagacctgat
cagatgatctttaagggtctgaaccttaaaattgatgcaggaaacacagtagccctagtg
gggccaagtggttcaggaaaatctactgtcattgggcttattgagagattctatgatcca
acaaaaggatctattttaattgatggacagaacataaagaactacaagttgaggatgctt
agatctcatattgcattagtcagtcaggaacctacattgttcgctggaactatccgtgag
aacatcatttatggtaaggagaatgcaacagaatccgaaatacgaaaagctgcagttctt
gccaatgcagatgaatttatcagtgggatgaaagatgggtatgatacatactgtggagaa
agaggagttcagctatcaggaggtcaaaaacagaggatagcacttgcccgtgccataatc
aagaacccgtcaatccttctattggatgaagctaccagcgctctagacagtgtctcagag
agcttagttcaggaagcacttgagaagatgatggttggcagaacatgcgtagttgtcgct
cacaggctatcaacaatacagaaatccaactgcattgcagtcatcaagaatgggaaaatt
gtggaagaaggttcacacaatgaactcgtctcattgggtcgtggtggagtgtactattct
ctgattaaagggcaaagcagcagcagctccccttatcgtttgaacaaatga
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integrated database retrieval system
